EY675869

Overview
NameEY675869
Unique NameEY675869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN12_MOUSE (Calpain-12 OS=Mus musculus GN=Capn12 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.493e-14
Identity = 48/137 (35.04%), Postives = 76/137 (55.47%), Query Frame = 2
Query:   80 GIVEGPPYIILQVREVD----GHKLVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKH--VPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEM-------RYSVH---GQW-RGYSAGGCQDYAS--WNQNPQFRL 433
            G+V+G  Y +    ++       +L+++RNPW   +EW+GPWSDS P W D +  + +   + + +DG FWM  QDF  HF ++ +C + P  +        + +H   G+W RG+++GG Q  A   W  NPQFRL
Sbjct:  254 GLVKGHAYSVTGTHKMSLGFTKVRLLRLRNPWGR-VEWSGPWSDSCPRW-DMLPSEWRDALLVKKEDGEFWMELQDFLTHFNTVQICSLSPEVLGPSPAGGGWHIHIFQGRWVRGFNSGGSQPSAENFWT-NPQFRL 387          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN11_HUMAN (Calpain-11 OS=Homo sapiens GN=CAPN11 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.493e-14
Identity = 44/139 (31.65%), Postives = 75/139 (53.96%), Query Frame = 2
Query:   83 IVEGPPYIILQVREVDGH----KLVQIRNPWANELEWNGPWSDSSPEWTDRMKH-KLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVHGQW----------RGYSAGGCQDY-ASWNQNPQFRLRASGSD 451
            +V G  Y +  +++V        L+++RNPW   +EWNG WSDS+ EW +     +++ + +++DG FWMS+QDF  +F  + +C + P  +       W          RG SAGGC+++  ++  NPQF++     D
Sbjct:  292 LVRGHAYSVTGLQDVHYRGKMETLIRVRNPWGR-IEWNGAWSDSAREWEEVASDIQMQLLHKTEDGEFWMSYQDFLNNFTLLEICNLTPDTLSGDYKSYWHTTFYEGSWRRGSSAGGCRNHPGTFWTNPQFKISLPEGD 429          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN2_CHICK (Calpain-2 catalytic subunit OS=Gallus gallus GN=CAPN2 PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.950e-14
Identity = 47/142 (33.10%), Postives = 77/142 (54.23%), Query Frame = 2
Query:   83 IVEGPPYIILQVREVDGH----KLVQIRNPWANELEWNGPWSDSSPEWTD---RMKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEM---RY------SVHGQW-RGYSAGGCQDYAS--WNQNPQFRLRASGSD 451
            +V+G  Y +    EV+      KL++IRNPW  E+EW G W+D+ P W+     ++ +L    + +DG FWM++ DF  H+  + +C + P  +   RY       + G W RG +AGGC++Y +  W  NPQ+ ++    D
Sbjct:  258 LVKGHAYSVTGAEEVNFRGSIQKLIRIRNPWG-EVEWTGKWNDNCPNWSGVDPEVRERLTR--RHEDGEFWMAFNDFLRHYSRLEICNLTPDTLASDRYKKWSLLKLDGNWRRGATAGGCRNYPNTFWT-NPQYLIKLEEED 395          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN2_RABIT (Calpain-2 catalytic subunit (Fragment) OS=Oryctolagus cuniculus GN=CAPN2 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.674e-14
Identity = 40/118 (33.90%), Postives = 65/118 (55.08%), Query Frame = 2
Query:  137 KLVQIRNPWANELEWNGPWSDSSPEW-TDRMKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVHGQW----------RGYSAGGCQDYAS--WNQNPQFRLRASGSD 451
            KL++IRNPW  E+EW G W+D+ P W T   + + +   + +DG FWMS+ DF  H+  + +C + P  +    + +W          RG +AGGC++Y +  W  NPQ+ ++    D
Sbjct:    2 KLIRIRNPWG-EVEWTGRWNDNCPNWNTVDPEVRERLAERHEDGEFWMSFSDFLRHYSRLEICNLTPDTLTSDTYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW-MNPQYVIKLEEED 117          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN14_HUMAN (Calpain-14 OS=Homo sapiens GN=CAPN14 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.678e-14
Identity = 49/140 (35.00%), Postives = 74/140 (52.86%), Query Frame = 2
Query:   65 KICFSGIVEGPPYIILQVREVD-GHK---LVQIRNPWANELEWNGPWSDSSPEWTDRM-KHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSV---------HGQWRGYSAGGCQDYA---SWNQNPQFRL 433
            KI  +G+VEG  Y +  +R+V   H+   LV++RNPW  ++EW G WSDSS +W     K K+  + +  DG FWM+ QDF+ HF  + +C++ P  +              G+W   S  G Q      ++ +NPQF L
Sbjct:  244 KILENGLVEGHAYTLTGIRKVTCKHRPEYLVKLRNPWG-KVEWKGDWSDSSSKWELLSPKEKILLLRKDNDGEFWMTLQDFKTHFVLLVICKLTPGLLSQEAAQKWTYTMREGRWEKRSTAGGQRQLLQDTFWKNPQFLL 382          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN12_HUMAN (Calpain-12 OS=Homo sapiens GN=CAPN12 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.678e-14
Identity = 70/245 (28.57%), Postives = 105/245 (42.86%), Query Frame = 2
Query:   80 GIVEGPPYIILQVREV----DGHKLVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKH--VPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMR----------YSVHGQW-RGYSAGGCQDYAS--WNQNPQFRLRASGSDASFAYSCFHYLDPRCEFPKKGWWVLKIINPVTNL*SSYIGKKKPK----------NRGRPAPHNFTHLIQLWEQIFKFPGKFLGEKGTGSEPKGYPKLPNTL 727
            G+V+G  Y I    +V       +L+++RNPW   +EW G WSDS P W D +  + +   + + +DG FWM  +DF +HF ++ +C + P  +           ++  G+W RG+++GG Q  A   W  NPQFRL     D           D   E P  GW       P         G + PK          NR R      T+L  +   +F+ P + L   G    P+ +  LP  L
Sbjct:  254 GLVKGHAYSITGTHKVFLGFTKVRLLRLRNPWGC-VEWTGAWSDSCPRW-DTLPTECRDALLVKKEDGEFWMELRDFLLHFDTVQICSLSPEVLGPSPEGGGWHVHTFQGRWVRGFNSGGSQPNAETFWT-NPQFRLTLLEPDEED--------DEDEEGPWGGWGAAGARGPAR-------GGRTPKCTVLLSLIQRNRRRLRAKGLTYL-TVGFHVFQIPEELL---GLWDSPRSHALLPRLL 476          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN15_MOUSE (Calpain-15 OS=Mus musculus GN=Solh PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.816e-13
Identity = 36/98 (36.73%), Postives = 54/98 (55.10%), Query Frame = 2
Query:  101 YIILQVREVDGHKLVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKHVPQ-SKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVHGQWRGYSAGGC 391
            Y +L VR+V G +L+++RNPW     WNG WSD  P W   ++ +L  +P  S +G+FWM + DF  +F S+ +C+         VH  W+     GC
Sbjct:  729 YSVLDVRDVQGSRLLRLRNPWGR-FSWNGSWSDEWPHWPGHLRAEL--MPHGSSEGVFWMEYSDFIRYFDSVDICK---------VHSDWQEARVQGC 814          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN_SCHMA (Calpain OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13
Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = 2
Query:  140 LVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKHVPQS--KDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVH-------------GQW-RGYSAGGC-QDYASWNQNPQFRLRASGSD 451
            L+++RNPW +  EW G W D SP+W +  + + K++  S   DG FWMS++DF   F  + VC +    + Y+ +             GQW R  +AGGC  +  ++  +PQFR+     D
Sbjct:  332 LMRLRNPWGDSHEWKGAWCDGSPQWREISEQEKKNINLSFTADGEFWMSYEDFVTCFSRVEVCHLGLESLEYNQNFHGKRRLDEAIFSGQWQRNVNAGGCINNRTTYWTSPQFRITVEDPD 452          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN15_HUMAN (Calpain-15 OS=Homo sapiens GN=SOLH PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13
Identity = 37/98 (37.76%), Postives = 54/98 (55.10%), Query Frame = 2
Query:  101 YIILQVREVDGHKLVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKHVPQ-SKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVHGQWRGYSAGGC 391
            Y IL VR+V G +L+++RNPW     WNG WSD  P W   ++ +L  +P  S +G+FWM + DF  +F S+ +C+         VH  W+     GC
Sbjct:  719 YSILDVRDVQGTRLLRLRNPWGR-FSWNGSWSDEWPHWPGHLRGEL--MPHGSSEGVFWMEYGDFVRYFDSVDICK---------VHSDWQEARVQGC 804          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN5_HUMAN (Calpain-5 OS=Homo sapiens GN=CAPN5 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12
Identity = 49/145 (33.79%), Postives = 72/145 (49.66%), Query Frame = 2
Query:   80 GIVEGPPYIILQVREVD-GHKL-----------VQIRNPWANELEWNGPWSDSSPEW--TDRMKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRV--------YPSEMRYSVHGQW------RGYSAGGCQDYA-SWNQNPQF 427
            G+V+G  Y +  VR+V  GH L           +++RNPW  E EWNGPWSD+S EW    + + +   V    DG FWM+++D   +F  I  CRV        + +     +HG W      R    GGC ++  ++ QNPQ+
Sbjct:  247 GLVKGHAYAVTDVRKVRLGHGLLAFFKSEKLDMIRLRNPWG-EREWNGPWSDTSEEWQKVSKSEREKMGVTVQDDGEFWMTFEDVCRYFTDIIKCRVINTSHLSIHKTWEEARLHGAWTLHEDPRQNRGGGCINHKDTFFQNPQY 390          
The following BLAST results are available for this feature:
BLAST of EY675869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
CAN12_MOUSE1.493e-1435.04Calpain-12 OS=Mus musculus GN=Capn12 PE=2 SV=1[more]
CAN11_HUMAN1.493e-1431.65Calpain-11 OS=Homo sapiens GN=CAPN11 PE=1 SV=2[more]
CAN2_CHICK1.950e-1433.10Calpain-2 catalytic subunit OS=Gallus gallus GN=CA... [more]
CAN2_RABIT5.674e-1433.90Calpain-2 catalytic subunit (Fragment) OS=Oryctola... [more]
CAN14_HUMAN9.678e-1435.00Calpain-14 OS=Homo sapiens GN=CAPN14 PE=2 SV=2[more]
CAN12_HUMAN9.678e-1428.57Calpain-12 OS=Homo sapiens GN=CAPN12 PE=2 SV=1[more]
CAN15_MOUSE2.816e-1336.73Calpain-15 OS=Mus musculus GN=Solh PE=1 SV=1[more]
CAN_SCHMA3.678e-1333.06Calpain OS=Schistosoma mansoni PE=2 SV=1[more]
CAN15_HUMAN3.678e-1337.76Calpain-15 OS=Homo sapiens GN=SOLH PE=1 SV=1[more]
CAN5_HUMAN1.070e-1233.79Calpain-5 OS=Homo sapiens GN=CAPN5 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-016-A09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675869 ID=EY675869; Name=EY675869; organism=Citrus sinensis; type=EST; length=919bp
TCCGGGTCGGGTCCGGGATTCCCGGGTCGACCCCTCGTCCGGGGAGTCCT
CACGCACCCCTTAAAAGATTTGTTTTAGTGGTATAGTGGAAGGCCCCCCC
TATATAATTCTACAGGTGAGGGAGGTGGATGGCCACAAGCTTGTTCAAAT
TCGAAATCCATGGGCTAATGAACTTGAATGGAATGGCCCCTGGTCTGATT
CGTCACCTGAATGGACTGACAGGATGAAACACAAGCTAAAACATGTTCCG
CAGTCAAAAGATGGTATATTCTGGATGTCCTGGCAAGATTTTCAGATTCA
CTTTCGATCAATATATGTCTGCCGTGTTTATCCGTCCGAGATGCGCTATT
CTGTGCACGGCCAATGGCGTGGTTACAGTGCAGGTGGTTGCCAAGATTAT
GCTTCATGGAATCAAAATCCTCAGTTCCGATTGAGGGCCTCTGGATCGGA
TGCATCATTTGCCTATTCATGTTTTCATTACCTTGACCCAAGGTGTGAGT
TTCCCAAGAAAGGTTGGTGGGTTTTAAAAATTATCAATCCAGTCACGAAT
CTATGAAGTTCCTATATTGGGAAGAAGAAACCGAAAAATCGGGGGCGCCC
GGCTCCTCACAATTTTACCCACTTAATCCAGTTGTGGGAACAAATATTTA
AATTCCCCGGGAAATTTCTTGGGGAAAAGGGTACGGGATCCGAACCAAAG
GGCTACCCAAAATTGCCTAACACCCTAACACCCCTGGGGAAAAAACCACC
TTTTGTTTCTTTTTGGGTTTACCAAAAAAAAAAAATTATCCAGGAAAGCT
TTTATTAAAAAAGGGGTGGGGCTTCTTTATTTTAAATTTTTATAACCTTT
TGGGAATATTATAATGGGGGTTACAGAATAATTTTTGGGGGGGGTGCCTG
GGGAAAACCCCAATAAAAA
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