EY675869

Overview
NameEY675869
Unique NameEY675869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Homology
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN11_MOUSE (Calpain-11 OS=Mus musculus GN=Capn11 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.384e-12
Identity = 41/135 (30.37%), Postives = 72/135 (53.33%), Query Frame = 2
Query:   83 IVEGPPYIILQVREV----DGHKLVQIRNPWANELEWNGPWSDSSPEWTDRMKH-KLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMR-YSVHGQW----------RGYSAGGCQDYAS--WNQNPQFRL 433
            +V G  Y +  + +V        L++I+NPW   +EWNG WSD + EW +     +++ + +  DG FWMS++DF  +F  + +C + P  +  +    +W          RG +AGGC+++    W+ NPQF++
Sbjct:  268 LVRGHAYAVTGLEDVYYRDKLETLIRIQNPWGR-VEWNGAWSDKATEWEEVSPDVRVQLLHKKDDGDFWMSYEDFMSNFTLLEICNLTPDALNTWDYKSRWHSTFYEGSWRRGSTAGGCRNHPETFWS-NPQFKI 400          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN5_MOUSE (Calpain-5 OS=Mus musculus GN=Capn5 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.311e-12
Identity = 46/145 (31.72%), Postives = 72/145 (49.66%), Query Frame = 2
Query:   80 GIVEGPPYIILQVREVD-GHKL-----------VQIRNPWANELEWNGPWSDSSPEW--TDRMKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCR--------VYPSEMRYSVHGQWRGYS------AGGCQDYA-SWNQNPQF 427
            G+V+G  Y +  VR+V  GH L           +++RNPW  E EW GPWSD+S EW    + + +   V    DG FWM+++D   +F  I  CR        ++ +     +HG W  +       +GGC ++  ++ QNPQ+
Sbjct:  247 GLVKGHAYAVTDVRKVRLGHGLLAFFKSEKLDMIRLRNPWG-EREWTGPWSDTSEEWQKVSKSEREKMGVTVQDDGEFWMTFEDMCRYFTDIIKCRLINTSYLSIHKTWEEARLHGAWTRHEDPQQNRSGGCINHKDTFFQNPQY 390          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAND_DROME (Calpain-D OS=Drosophila melanogaster GN=sol PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 30/77 (38.96%), Postives = 51/77 (66.23%), Query Frame = 2
Query:  101 YIILQVREVDGHKLVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKHVPQ-SKDGIFWMSWQDFQIHFRSIYVCRV 328
            Y +L V+++ GH+L+++RNPW +   W G WSD S  WTD ++  L  +P  + +G+FW+S++D   +F  I +C+V
Sbjct: 1247 YSVLDVKDIQGHRLLKLRNPWGH-YSWRGDWSDDSSLWTDDLRDAL--MPHGASEGVFWISFEDVLNYFDCIDICKV 1320          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN5_CAEEL (Calpain-5 OS=Caenorhabditis elegans GN=tra-3 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 54/200 (27.00%), Postives = 87/200 (43.50%), Query Frame = 2
Query:   80 GIVEGPPYIILQVREVD--------------GHK----LVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKHV------PQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEM--------------RYSVHGQWRGY---SAGGCQDY-ASWNQNPQFRLRASGSDASFAYSCFHY-----LDPRCEFPKKGWWVLKIIN 538
            G+V+G  Y +  V  +D              G K    L++++NPW  E EWNG WSD SPEW +    +L  +        S DG FWM W+ F  +F  I +C+++ + +               ++ +G+  G     AGGC ++ A++  NPQ+       + S  ++         L  R  F   G  V+K+ N
Sbjct:  247 GLVKGHAYAVSAVCTIDVTNPNERSFTSFIMGSKRKQNLIRLQNPWG-EKEWNGAWSDDSPEWQNVSASQLSTMGVQPANSDSDDGDFWMPWESFVHYFTDISLCQLFNTSVFSFSRSYDEQIVFSEWTTNGKKSGAPDDRAGGCHNFKATFCNNPQYIFDIPSPNCSVMFALIQNDPSEGLKKREPFVTIGMHVMKVEN 445          
The following BLAST results are available for this feature:
BLAST of EY675869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
CAN11_MOUSE2.384e-1230.37Calpain-11 OS=Mus musculus GN=Capn11 PE=1 SV=1[more]
CAN5_MOUSE5.311e-1231.72Calpain-5 OS=Mus musculus GN=Capn5 PE=2 SV=1[more]
CAND_DROME1.545e-1138.96Calpain-D OS=Drosophila melanogaster GN=sol PE=1 S... [more]
CAN5_CAEEL4.496e-1127.00Calpain-5 OS=Caenorhabditis elegans GN=tra-3 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-016-A09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675869 ID=EY675869; Name=EY675869; organism=Citrus sinensis; type=EST; length=919bp
TCCGGGTCGGGTCCGGGATTCCCGGGTCGACCCCTCGTCCGGGGAGTCCT
CACGCACCCCTTAAAAGATTTGTTTTAGTGGTATAGTGGAAGGCCCCCCC
TATATAATTCTACAGGTGAGGGAGGTGGATGGCCACAAGCTTGTTCAAAT
TCGAAATCCATGGGCTAATGAACTTGAATGGAATGGCCCCTGGTCTGATT
CGTCACCTGAATGGACTGACAGGATGAAACACAAGCTAAAACATGTTCCG
CAGTCAAAAGATGGTATATTCTGGATGTCCTGGCAAGATTTTCAGATTCA
CTTTCGATCAATATATGTCTGCCGTGTTTATCCGTCCGAGATGCGCTATT
CTGTGCACGGCCAATGGCGTGGTTACAGTGCAGGTGGTTGCCAAGATTAT
GCTTCATGGAATCAAAATCCTCAGTTCCGATTGAGGGCCTCTGGATCGGA
TGCATCATTTGCCTATTCATGTTTTCATTACCTTGACCCAAGGTGTGAGT
TTCCCAAGAAAGGTTGGTGGGTTTTAAAAATTATCAATCCAGTCACGAAT
CTATGAAGTTCCTATATTGGGAAGAAGAAACCGAAAAATCGGGGGCGCCC
GGCTCCTCACAATTTTACCCACTTAATCCAGTTGTGGGAACAAATATTTA
AATTCCCCGGGAAATTTCTTGGGGAAAAGGGTACGGGATCCGAACCAAAG
GGCTACCCAAAATTGCCTAACACCCTAACACCCCTGGGGAAAAAACCACC
TTTTGTTTCTTTTTGGGTTTACCAAAAAAAAAAAATTATCCAGGAAAGCT
TTTATTAAAAAAGGGGTGGGGCTTCTTTATTTTAAATTTTTATAACCTTT
TGGGAATATTATAATGGGGGTTACAGAATAATTTTTGGGGGGGGTGCCTG
GGGAAAACCCCAATAAAAA
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