EY675683

Overview
NameEY675683
Unique NameEY675683
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y2299_PSEE4 (UPF0502 protein PSEEN2299 OS=Pseudomonas entomophila (strain L48) GN=PSEEN2299 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.461e-23
Identity = 58/85 (68.24%), Postives = 67/85 (78.82%), Query Frame = 1
Query:  349 TEHDTTSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPALKGPGVTPAGMGHPPQR 603
            +EH+TT E  R +S EIR+LG LIEKQATSPETYPLTLNALV+ACNQKT+REPVMNLS GQVGQ+L AL+G  +    MG    R
Sbjct:    2 SEHETTGEG-RFSSIEIRVLGSLIEKQATSPETYPLTLNALVLACNQKTSREPVMNLSPGQVGQALRALEGQEMARLQMGSRADR 85          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y1674_PSEA7 (UPF0502 protein PSPA7_1674 OS=Pseudomonas aeruginosa (strain PA7) GN=PSPA7_1674 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.701e-22
Identity = 67/133 (50.38%), Postives = 84/133 (63.16%), Query Frame = 1
Query:  343 MTTEHDTTSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPALKGPGVTPAGMGHPPQRL-GTFGGTRPLERGAGPGEFSGGLFVPGGGPQ-------RGKKIHD 717
            MTTE ++   +  L++ + RILG L+EKQAT+PETYPLTLNALV+ACNQKT+REPVMNL+ GQVGQSL  L+G G+    MG    R   T G  + LE  A      G LF+   GPQ       R  ++HD
Sbjct:    1 MTTEPNSPFVDDPLSAVDARILGSLVEKQATTPETYPLTLNALVLACNQKTSREPVMNLTPGQVGQSLRQLEGRGLVKLVMGSRADRWEHTLG--KGLELVAPQVALLGLLFL--RGPQTLNELLTRSNRLHD 129          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y3453_PSEAE (UPF0502 protein PA3453 OS=Pseudomonas aeruginosa GN=PA3453 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.980e-21
Identity = 65/133 (48.87%), Postives = 84/133 (63.16%), Query Frame = 1
Query:  343 MTTEHDTTSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPALKGPGVTPAGMGHPPQRL-GTFGGTRPLERGAGPGEFSGGLFVPGGGPQ-------RGKKIHD 717
            M+TE ++   +  L++ + RILG L+EKQAT+PETYPLTLNALV+ACNQKT+R+PVMNL+ GQVGQSL  L+G G+    MG    R   T G  + LE  A      G LF+   GPQ       R  ++HD
Sbjct:    1 MSTEPNSPFVDDPLSAVDARILGSLVEKQATTPETYPLTLNALVLACNQKTSRDPVMNLTPGQVGQSLRQLEGRGLVRLVMGSRADRWEHTLG--KGLELVAPQVALLGLLFL--RGPQTLNELLTRSNRLHD 129          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y1945_PSEAB (UPF0502 protein PA14_19450 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=PA14_19450 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.980e-21
Identity = 65/133 (48.87%), Postives = 84/133 (63.16%), Query Frame = 1
Query:  343 MTTEHDTTSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPALKGPGVTPAGMGHPPQRL-GTFGGTRPLERGAGPGEFSGGLFVPGGGPQ-------RGKKIHD 717
            M+TE ++   +  L++ + RILG L+EKQAT+PETYPLTLNALV+ACNQKT+R+PVMNL+ GQVGQSL  L+G G+    MG    R   T G  + LE  A      G LF+   GPQ       R  ++HD
Sbjct:    1 MSTEPNSPFVDDPLSAVDARILGSLVEKQATTPETYPLTLNALVLACNQKTSRDPVMNLTPGQVGQSLRQLEGRGLVRLVMGSRADRWEHTLG--KGLELVAPQVALLGLLFL--RGPQTLSELLTRSNRLHD 129          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y1607_PSEA8 (UPF0502 protein PLES_16071 OS=Pseudomonas aeruginosa (strain LESB58) GN=PLES_16071 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.980e-21
Identity = 65/133 (48.87%), Postives = 84/133 (63.16%), Query Frame = 1
Query:  343 MTTEHDTTSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPALKGPGVTPAGMGHPPQRL-GTFGGTRPLERGAGPGEFSGGLFVPGGGPQ-------RGKKIHD 717
            M+TE ++   +  L++ + RILG L+EKQAT+PETYPLTLNALV+ACNQKT+R+PVMNL+ GQVGQSL  L+G G+    MG    R   T G  + LE  A      G LF+   GPQ       R  ++HD
Sbjct:    1 MSTEPNSPFVDDPLSAVDARILGSLVEKQATTPETYPLTLNALVLACNQKTSRDPVMNLTPGQVGQSLRQLEGRGLVRLVMGSRADRWEHTLG--KGLELVAPQVALLGLLFL--RGPQTLNELLTRSNRLHD 129          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y479_AZOVD (UPF0502 protein Avin_04790 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=Avin_04790 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.788e-21
Identity = 50/87 (57.47%), Postives = 63/87 (72.41%), Query Frame = 1
Query:  343 MTTEHDTTSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPALKGPGVTPAGMGHPPQR 603
            M+   +T S     N+ E+RILGCLIEKQAT+PE+YPLTLNALV+ACNQK++REP+MNL+ GQVGQ L  L+G  +    MG    R
Sbjct:    1 MSDRAETPSVREPFNAIEVRILGCLIEKQATTPESYPLTLNALVLACNQKSSREPLMNLASGQVGQGLRQLEGRSLVELVMGSRADR 87          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y2627_PSEMY (UPF0502 protein Pmen_2627 OS=Pseudomonas mendocina (strain ymp) GN=Pmen_2627 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.044e-17
Identity = 44/77 (57.14%), Postives = 57/77 (74.03%), Query Frame = 1
Query:  373 EPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPALKGPGVTPAGMGHPPQR 603
            E  L++ E+RILGCLIEKQ T+PETYPLTLNA+ +ACNQKT+REP+M L  G+VG+ L +L+G  +    MG    R
Sbjct:   11 ETPLHAVEVRILGCLIEKQLTTPETYPLTLNAVQLACNQKTSREPLMQLETGEVGRYLRSLEGRKLVHLVMGSRADR 87          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y2082_YERPB (UPF0502 protein YPTS_2082 OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=YPTS_2082 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.762e-14
Identity = 35/58 (60.34%), Postives = 47/58 (81.03%), Query Frame = 1
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            LN+ E R++GCL+EKQ T+PE YP++LN L +ACNQKT+R+PVM LS+ QV Q+L  L
Sbjct:    5 LNAHEARVIGCLLEKQVTTPEQYPMSLNGLTLACNQKTSRDPVMELSESQVQQTLDFL 62          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y2048_YERP3 (UPF0502 protein YpsIP31758_2048 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=YpsIP31758_2048 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.762e-14
Identity = 35/58 (60.34%), Postives = 47/58 (81.03%), Query Frame = 1
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            LN+ E R++GCL+EKQ T+PE YP++LN L +ACNQKT+R+PVM LS+ QV Q+L  L
Sbjct:    5 LNAHEARVIGCLLEKQVTTPEQYPMSLNGLTLACNQKTSRDPVMELSESQVQQTLDFL 62          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y2024_YERPS (UPF0502 protein YPTB2024 OS=Yersinia pseudotuberculosis GN=YPTB2024 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.762e-14
Identity = 35/58 (60.34%), Postives = 47/58 (81.03%), Query Frame = 1
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            LN+ E R++GCL+EKQ T+PE YP++LN L +ACNQKT+R+PVM LS+ QV Q+L  L
Sbjct:    5 LNAHEARVIGCLLEKQVTTPEQYPMSLNGLTLACNQKTSRDPVMELSESQVQQTLDFL 62          
The following BLAST results are available for this feature:
BLAST of EY675683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
Y2299_PSEE41.461e-2368.24UPF0502 protein PSEEN2299 OS=Pseudomonas entomophi... [more]
Y1674_PSEA74.701e-2250.38UPF0502 protein PSPA7_1674 OS=Pseudomonas aerugino... [more]
Y3453_PSEAE3.980e-2148.87UPF0502 protein PA3453 OS=Pseudomonas aeruginosa G... [more]
Y1945_PSEAB3.980e-2148.87UPF0502 protein PA14_19450 OS=Pseudomonas aerugino... [more]
Y1607_PSEA83.980e-2148.87UPF0502 protein PLES_16071 OS=Pseudomonas aerugino... [more]
Y479_AZOVD6.788e-2157.47UPF0502 protein Avin_04790 OS=Azotobacter vineland... [more]
Y2627_PSEMY2.044e-1757.14UPF0502 protein Pmen_2627 OS=Pseudomonas mendocina... [more]
Y2082_YERPB2.762e-1460.34UPF0502 protein YPTS_2082 OS=Yersinia pseudotuberc... [more]
Y2048_YERP32.762e-1460.34UPF0502 protein YpsIP31758_2048 OS=Yersinia pseudo... [more]
Y2024_YERPS2.762e-1460.34UPF0502 protein YPTB2024 OS=Yersinia pseudotubercu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-H03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675683 ID=EY675683; Name=EY675683; organism=Citrus sinensis; type=EST; length=968bp
ACCGGGCGGGTCACCGGTCGGGATTCCCGGGTCGACAGCGATCTGCACCT
GACGCACCAGCGCCCTCTTGAGCGGGTACAGGCGTGCTTGCAGGAAGGCG
TTCCCGTCGATGTTCTTGGCGGTGGCGTGGGCTTCGGCCTTGTTCAGCAC
ATCGCTCAGGGCGTTGAGCATTTGCTTCCAGACCGGGAGGGAAGCGGCGT
ACAGGGAAATAGTCATGACAGTCTCGACAGTTGTGGCAGGGTTTGAAACA
GCGGCGATTATAGACATGCCGGCCGCCAGCGCCGCTTGTCTTTTATTTTT
TCAGGATTAGGCTAGTGGGCTCACTGCATTAGGGAAAGCGCGATGACCAC
CGAGCACGACACCACTTCCGAAGAGCCGCGCCTGAACAGCACGGAAATCC
GCATCCTGGGCTGCCTGATCGAAAAGCAGGCTACCAGCCCTGAAACCTAC
CCGTTGACGCTCAACGCGCTGGTGATCGCCTGCAACCAGAAAACCACCCG
CGAACCGGTGATGAACCTCAGCCAGGGCCAGGTCGGGCAGAGCCTGCCGG
CCCTGAAAGGTCCCGGGGTTACCCCGGCGGGGATGGGGCACCCCCCCCAA
CGCCTGGGAACCTTCGGGGGGACAAGGCCCTTGGAACGGGGGGCCGGCCC
AGGGGAATTCTCAGGGGGGCTGTTTGTTCCTGGGGGGGGCCCCCAAAGGG
GTAAAAAAATACATGACCCCCCACCGGAACCCCTGCCCAAATTTTGAAAA
AAACCCGAAGAAAGTGGGGTGCTCCCAACTGGAAACACCCTAATTGGCCC
CTTGGGGGCGGGCTTTTTTTTGGGGGCCCCCTTCCACTCCGGGGCGAAAC
GGGGAAAAAATAACAGTACATAAACCACCCCCCCCTGGGGGGGAACCACA
CGGGGAGTTAATTATAAAACAGCCTCTCCTTGGGGCGGGAGCCCGGTGGG
GAAACCCCCCCGGGGAGG
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