EY675683

Overview
NameEY675683
Unique NameEY675683
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y097_STRMK (UPF0502 protein Smlt0097 OS=Stenotrophomonas maltophilia (strain K279a) GN=Smlt0097 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.712e-14
Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 1
Query:  349 TEHDTTSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPALKGPGV 570
            T+   T + P L++ + R+LGCL+EK+AT+P+TYPLT+NA   A NQKT REPVMN+  G V  +L  L+  G+
Sbjct:    2 TDSVQTPDVPLLDAVQARLLGCLVEKEATTPDTYPLTVNAAQSAANQKTAREPVMNIDAGSVQHALRQLEALGL 75          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y3616_XANOP (UPF0502 protein PXO_03616 OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=PXO_03616 PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 6.154e-14
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  364 TSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPALKGPGV 570
            TS  P L++ + R+LGCLIEK+AT+P+ YPLT+NA  +A NQKT REPV+NL  G V  +L  L+  G+
Sbjct:    4 TSPTPVLDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLNLQTGVVHHALRQLENLGL 72          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y245_XANOR (UPF0502 protein XOO0245 OS=Xanthomonas oryzae pv. oryzae GN=XOO0245 PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 6.154e-14
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  364 TSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPALKGPGV 570
            TS  P L++ + R+LGCLIEK+AT+P+ YPLT+NA  +A NQKT REPV+NL  G V  +L  L+  G+
Sbjct:    4 TSPTPVLDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLNLQTGVVHHALRQLENLGL 72          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y224_XANOM (UPF0502 protein XOO0224 OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=XOO0224 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.154e-14
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  364 TSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPALKGPGV 570
            TS  P L++ + R+LGCLIEK+AT+P+ YPLT+NA  +A NQKT REPV+NL  G V  +L  L+  G+
Sbjct:    4 TSPTPVLDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLNLQTGVVHHALRQLENLGL 72          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y4380_XANC5 (UPF0502 protein XCV4380 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=XCV4380 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.050e-13
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  364 TSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPALKGPGV 570
            TS  P L++ + R+LGCLIEK+AT+P+ YPLT+NA  +A NQKT REPV+NL  G V  +L  L+  G+
Sbjct:    4 TSPPPVLDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLNLQTGVVHHALRQLETLGL 72          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y4278_XANAC (UPF0502 protein XAC4278 OS=Xanthomonas axonopodis pv. citri GN=XAC4278 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.050e-13
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  364 TSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPALKGPGV 570
            TS  P L++ + R+LGCLIEK+AT+P+ YPLT+NA  +A NQKT REPV+NL  G V  +L  L+  G+
Sbjct:    4 TSPPPVLDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLNLQTGVVHHALRQLETLGL 72          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y3478_KLEP3 (UPF0502 protein KPK_3478 OS=Klebsiella pneumoniae (strain 342) GN=KPK_3478 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.050e-13
Identity = 35/59 (59.32%), Postives = 47/59 (79.66%), Query Frame = 1
Query:  379 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            +L + E R++GCL+EKQ T+PE YPL++NA+V ACNQKT REPVM+LS+G+V   L  L
Sbjct:    4 QLTAHEARVIGCLLEKQVTTPEQYPLSVNAVVTACNQKTNREPVMSLSEGEVQTLLDTL 62          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y1581_ENT38 (UPF0502 protein Ent638_1581 OS=Enterobacter sp. (strain 638) GN=Ent638_1581 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.050e-13
Identity = 34/59 (57.63%), Postives = 47/59 (79.66%), Query Frame = 1
Query:  379 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            +L +TE R++GCL+EKQ T+PE YPL++NA+ +ACNQK+ REPV+NLS+  V   L AL
Sbjct:    4 QLTATEARVIGCLLEKQVTTPEQYPLSVNAVTLACNQKSNREPVLNLSEHDVQDHLDAL 62          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y1184_GEOSF (UPF0502 protein Geob_1184 OS=Geobacter sp. (strain FRC-32) GN=Geob_1184 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.050e-13
Identity = 35/59 (59.32%), Postives = 48/59 (81.36%), Query Frame = 1
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPALK 558
            LN  E+R+LG LIEK+ T+PE YPL+LNAL  ACNQK+ R+PV+NL +G+V ++L +LK
Sbjct:    5 LNEVEVRVLGSLIEKELTTPEYYPLSLNALTNACNQKSNRDPVLNLDEGEVVRALDSLK 63          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: Y052_STRM5 (UPF0502 protein Smal_0052 OS=Stenotrophomonas maltophilia (strain R551-3) GN=Smal_0052 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.050e-13
Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 1
Query:  349 TEHDTTSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPALKGPGV 570
            T+   T + P L++ + R+LGCL+EK+AT+P+TYPLT+NA   A NQKT REPVMN+  G V  +L  L+  G+
Sbjct:    2 TDSTQTPDIPLLDAVQARLLGCLVEKEATTPDTYPLTVNAAQSAANQKTAREPVMNIDAGGVQHALRQLETLGL 75          
The following BLAST results are available for this feature:
BLAST of EY675683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
Y097_STRMK4.712e-1450.00UPF0502 protein Smlt0097 OS=Stenotrophomonas malto... [more]
Y3616_XANOP6.154e-1453.62UPF0502 protein PXO_03616 OS=Xanthomonas oryzae pv... [more]
Y245_XANOR6.154e-1453.62UPF0502 protein XOO0245 OS=Xanthomonas oryzae pv. ... [more]
Y224_XANOM6.154e-1453.62UPF0502 protein XOO0224 OS=Xanthomonas oryzae pv. ... [more]
Y4380_XANC51.050e-1353.62UPF0502 protein XCV4380 OS=Xanthomonas campestris ... [more]
Y4278_XANAC1.050e-1353.62UPF0502 protein XAC4278 OS=Xanthomonas axonopodis ... [more]
Y3478_KLEP31.050e-1359.32UPF0502 protein KPK_3478 OS=Klebsiella pneumoniae ... [more]
Y1581_ENT381.050e-1357.63UPF0502 protein Ent638_1581 OS=Enterobacter sp. (s... [more]
Y1184_GEOSF1.050e-1359.32UPF0502 protein Geob_1184 OS=Geobacter sp. (strain... [more]
Y052_STRM51.050e-1350.00UPF0502 protein Smal_0052 OS=Stenotrophomonas malt... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-H03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675683 ID=EY675683; Name=EY675683; organism=Citrus sinensis; type=EST; length=968bp
ACCGGGCGGGTCACCGGTCGGGATTCCCGGGTCGACAGCGATCTGCACCT
GACGCACCAGCGCCCTCTTGAGCGGGTACAGGCGTGCTTGCAGGAAGGCG
TTCCCGTCGATGTTCTTGGCGGTGGCGTGGGCTTCGGCCTTGTTCAGCAC
ATCGCTCAGGGCGTTGAGCATTTGCTTCCAGACCGGGAGGGAAGCGGCGT
ACAGGGAAATAGTCATGACAGTCTCGACAGTTGTGGCAGGGTTTGAAACA
GCGGCGATTATAGACATGCCGGCCGCCAGCGCCGCTTGTCTTTTATTTTT
TCAGGATTAGGCTAGTGGGCTCACTGCATTAGGGAAAGCGCGATGACCAC
CGAGCACGACACCACTTCCGAAGAGCCGCGCCTGAACAGCACGGAAATCC
GCATCCTGGGCTGCCTGATCGAAAAGCAGGCTACCAGCCCTGAAACCTAC
CCGTTGACGCTCAACGCGCTGGTGATCGCCTGCAACCAGAAAACCACCCG
CGAACCGGTGATGAACCTCAGCCAGGGCCAGGTCGGGCAGAGCCTGCCGG
CCCTGAAAGGTCCCGGGGTTACCCCGGCGGGGATGGGGCACCCCCCCCAA
CGCCTGGGAACCTTCGGGGGGACAAGGCCCTTGGAACGGGGGGCCGGCCC
AGGGGAATTCTCAGGGGGGCTGTTTGTTCCTGGGGGGGGCCCCCAAAGGG
GTAAAAAAATACATGACCCCCCACCGGAACCCCTGCCCAAATTTTGAAAA
AAACCCGAAGAAAGTGGGGTGCTCCCAACTGGAAACACCCTAATTGGCCC
CTTGGGGGCGGGCTTTTTTTTGGGGGCCCCCTTCCACTCCGGGGCGAAAC
GGGGAAAAAATAACAGTACATAAACCACCCCCCCCTGGGGGGGAACCACA
CGGGGAGTTAATTATAAAACAGCCTCTCCTTGGGGCGGGAGCCCGGTGGG
GAAACCCCCCCGGGGAGG
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