EY675683

Overview
NameEY675683
Unique NameEY675683
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SHISS (UPF0502 protein yceH OS=Shigella sonnei (strain Ss046) GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 1 
Query:  379 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNLS+ +V + L  L
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNL 62
[Close]
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SHIFL (UPF0502 protein yceH OS=Shigella flexneri GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 1 
Query:  379 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNLS+ +V + L  L
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNL 62
[Close]
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SHIF8 (UPF0502 protein yceH OS=Shigella flexneri serotype 5b (strain 8401) GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 1 
Query:  379 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNLS+ +V + L  L
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNL 62
[Close]
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SHIBS (UPF0502 protein yceH OS=Shigella boydii serotype 4 (strain Sb227) GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 1 
Query:  379 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNLS+ +V + L  L
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNL 62
[Close]
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SHIB3 (UPF0502 protein yceH OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 1 
Query:  379 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNLS+ +V + L  L
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNL 62
[Close]
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SALTY (UPF0502 protein yceH OS=Salmonella typhimurium GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 1 
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNL++ +V + L  L
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNL 62
[Close]
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SALTI (UPF0502 protein yceH OS=Salmonella typhi GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 1 
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNL++ +V + L  L
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNL 62
[Close]
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SALSV (UPF0502 protein yceH OS=Salmonella schwarzengrund (strain CVM19633) GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 1 
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNL++ +V + L  L
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNL 62
[Close]
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SALPK (UPF0502 protein yceH OS=Salmonella paratyphi A (strain AKU_12601) GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 1 
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNL++ +V + L  L
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNL 62
[Close]
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SALPC (UPF0502 protein yceH OS=Salmonella paratyphi C (strain RKS4594) GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 1 
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNL++ +V + L  L
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNL 62
The following BLAST results are available for this feature:
BLAST of EY675683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
YCEH_SHISS1.371e-1357.63UPF0502 protein yceH OS=Shigella sonnei (strain Ss... [more]
YCEH_SHIFL1.371e-1357.63UPF0502 protein yceH OS=Shigella flexneri GN=yceH ... [more]
YCEH_SHIF81.371e-1357.63UPF0502 protein yceH OS=Shigella flexneri serotype... [more]
YCEH_SHIBS1.371e-1357.63UPF0502 protein yceH OS=Shigella boydii serotype 4... [more]
YCEH_SHIB31.371e-1357.63UPF0502 protein yceH OS=Shigella boydii serotype 1... [more]
YCEH_SALTY1.371e-1358.62UPF0502 protein yceH OS=Salmonella typhimurium GN=... [more]
YCEH_SALTI1.371e-1358.62UPF0502 protein yceH OS=Salmonella typhi GN=yceH P... [more]
YCEH_SALSV1.371e-1358.62UPF0502 protein yceH OS=Salmonella schwarzengrund ... [more]
YCEH_SALPK1.371e-1358.62UPF0502 protein yceH OS=Salmonella paratyphi A (st... [more]
YCEH_SALPC1.371e-1358.62UPF0502 protein yceH OS=Salmonella paratyphi C (st... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-H03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675683 ID=EY675683; Name=EY675683; organism=Citrus sinensis; type=EST; length=968bp
ACCGGGCGGGTCACCGGTCGGGATTCCCGGGTCGACAGCGATCTGCACCT
GACGCACCAGCGCCCTCTTGAGCGGGTACAGGCGTGCTTGCAGGAAGGCG
TTCCCGTCGATGTTCTTGGCGGTGGCGTGGGCTTCGGCCTTGTTCAGCAC
ATCGCTCAGGGCGTTGAGCATTTGCTTCCAGACCGGGAGGGAAGCGGCGT
ACAGGGAAATAGTCATGACAGTCTCGACAGTTGTGGCAGGGTTTGAAACA
GCGGCGATTATAGACATGCCGGCCGCCAGCGCCGCTTGTCTTTTATTTTT
TCAGGATTAGGCTAGTGGGCTCACTGCATTAGGGAAAGCGCGATGACCAC
CGAGCACGACACCACTTCCGAAGAGCCGCGCCTGAACAGCACGGAAATCC
GCATCCTGGGCTGCCTGATCGAAAAGCAGGCTACCAGCCCTGAAACCTAC
CCGTTGACGCTCAACGCGCTGGTGATCGCCTGCAACCAGAAAACCACCCG
CGAACCGGTGATGAACCTCAGCCAGGGCCAGGTCGGGCAGAGCCTGCCGG
CCCTGAAAGGTCCCGGGGTTACCCCGGCGGGGATGGGGCACCCCCCCCAA
CGCCTGGGAACCTTCGGGGGGACAAGGCCCTTGGAACGGGGGGCCGGCCC
AGGGGAATTCTCAGGGGGGCTGTTTGTTCCTGGGGGGGGCCCCCAAAGGG
GTAAAAAAATACATGACCCCCCACCGGAACCCCTGCCCAAATTTTGAAAA
AAACCCGAAGAAAGTGGGGTGCTCCCAACTGGAAACACCCTAATTGGCCC
CTTGGGGGCGGGCTTTTTTTTGGGGGCCCCCTTCCACTCCGGGGCGAAAC
GGGGAAAAAATAACAGTACATAAACCACCCCCCCCTGGGGGGGAACCACA
CGGGGAGTTAATTATAAAACAGCCTCTCCTTGGGGCGGGAGCCCGGTGGG
GAAACCCCCCCGGGGAGG
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