EY675683

Overview
NameEY675683
Unique NameEY675683
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SALPB (UPF0502 protein yceH OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNL++ +V + L  L
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNL 62          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SALPA (UPF0502 protein yceH OS=Salmonella paratyphi A GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNL++ +V + L  L
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNL 62          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SALNS (UPF0502 protein yceH OS=Salmonella newport (strain SL254) GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNL++ +V + L  L
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNL 62          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SALHS (UPF0502 protein yceH OS=Salmonella heidelberg (strain SL476) GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNL++ +V + L  L
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNL 62          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SALEP (UPF0502 protein yceH OS=Salmonella enteritidis PT4 (strain P125109) GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNL++ +V + L  L
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNL 62          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SALDC (UPF0502 protein yceH OS=Salmonella dublin (strain CT_02021853) GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNL++ +V + L  L
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNL 62          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SALCH (UPF0502 protein yceH OS=Salmonella choleraesuis GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNL++ +V + L  L
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNL 62          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_SALA4 (UPF0502 protein yceH OS=Salmonella agona (strain SL483) GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  382 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNL++ +V + L  L
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNL 62          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_ECOUT (UPF0502 protein yceH OS=Escherichia coli (strain UTI89 / UPEC) GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 1
Query:  379 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNLS+ +V + L  L
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNL 62          
BLAST of EY675683 vs. ExPASy Swiss-Prot
Match: YCEH_ECOSM (UPF0502 protein yceH OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=yceH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 1
Query:  379 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTTREPVMNLSQGQVGQSLPAL 555
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT REPVMNLS+ +V + L  L
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNL 62          
The following BLAST results are available for this feature:
BLAST of EY675683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
YCEH_SALPB1.371e-1358.62UPF0502 protein yceH OS=Salmonella paratyphi B (st... [more]
YCEH_SALPA1.371e-1358.62UPF0502 protein yceH OS=Salmonella paratyphi A GN=... [more]
YCEH_SALNS1.371e-1358.62UPF0502 protein yceH OS=Salmonella newport (strain... [more]
YCEH_SALHS1.371e-1358.62UPF0502 protein yceH OS=Salmonella heidelberg (str... [more]
YCEH_SALEP1.371e-1358.62UPF0502 protein yceH OS=Salmonella enteritidis PT4... [more]
YCEH_SALDC1.371e-1358.62UPF0502 protein yceH OS=Salmonella dublin (strain ... [more]
YCEH_SALCH1.371e-1358.62UPF0502 protein yceH OS=Salmonella choleraesuis GN... [more]
YCEH_SALA41.371e-1358.62UPF0502 protein yceH OS=Salmonella agona (strain S... [more]
YCEH_ECOUT1.371e-1357.63UPF0502 protein yceH OS=Escherichia coli (strain U... [more]
YCEH_ECOSM1.371e-1357.63UPF0502 protein yceH OS=Escherichia coli (strain S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-H03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675683 ID=EY675683; Name=EY675683; organism=Citrus sinensis; type=EST; length=968bp
ACCGGGCGGGTCACCGGTCGGGATTCCCGGGTCGACAGCGATCTGCACCT
GACGCACCAGCGCCCTCTTGAGCGGGTACAGGCGTGCTTGCAGGAAGGCG
TTCCCGTCGATGTTCTTGGCGGTGGCGTGGGCTTCGGCCTTGTTCAGCAC
ATCGCTCAGGGCGTTGAGCATTTGCTTCCAGACCGGGAGGGAAGCGGCGT
ACAGGGAAATAGTCATGACAGTCTCGACAGTTGTGGCAGGGTTTGAAACA
GCGGCGATTATAGACATGCCGGCCGCCAGCGCCGCTTGTCTTTTATTTTT
TCAGGATTAGGCTAGTGGGCTCACTGCATTAGGGAAAGCGCGATGACCAC
CGAGCACGACACCACTTCCGAAGAGCCGCGCCTGAACAGCACGGAAATCC
GCATCCTGGGCTGCCTGATCGAAAAGCAGGCTACCAGCCCTGAAACCTAC
CCGTTGACGCTCAACGCGCTGGTGATCGCCTGCAACCAGAAAACCACCCG
CGAACCGGTGATGAACCTCAGCCAGGGCCAGGTCGGGCAGAGCCTGCCGG
CCCTGAAAGGTCCCGGGGTTACCCCGGCGGGGATGGGGCACCCCCCCCAA
CGCCTGGGAACCTTCGGGGGGACAAGGCCCTTGGAACGGGGGGCCGGCCC
AGGGGAATTCTCAGGGGGGCTGTTTGTTCCTGGGGGGGGCCCCCAAAGGG
GTAAAAAAATACATGACCCCCCACCGGAACCCCTGCCCAAATTTTGAAAA
AAACCCGAAGAAAGTGGGGTGCTCCCAACTGGAAACACCCTAATTGGCCC
CTTGGGGGCGGGCTTTTTTTTGGGGGCCCCCTTCCACTCCGGGGCGAAAC
GGGGAAAAAATAACAGTACATAAACCACCCCCCCCTGGGGGGGAACCACA
CGGGGAGTTAATTATAAAACAGCCTCTCCTTGGGGCGGGAGCCCGGTGGG
GAAACCCCCCCGGGGAGG
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