EY675627

Overview
NameEY675627
Unique NameEY675627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECOLU (Glycogen synthase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1 
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407
[Close]
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECOLI (Glycogen synthase OS=Escherichia coli (strain K12) GN=glgA PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1 
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407
[Close]
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECOLC (Glycogen synthase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1 
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407
[Close]
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECOL6 (Glycogen synthase OS=Escherichia coli O6 GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1 
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407
[Close]
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECOL5 (Glycogen synthase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1 
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407
[Close]
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECOK1 (Glycogen synthase OS=Escherichia coli O1:K1 / APEC GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1 
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407
[Close]
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECOHS (Glycogen synthase OS=Escherichia coli O9:H4 (strain HS) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1 
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407
[Close]
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECODH (Glycogen synthase OS=Escherichia coli (strain K12 / DH10B) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1 
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407
[Close]
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECOBW (Glycogen synthase OS=Escherichia coli (strain K12 / BW2952) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1 
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407
[Close]
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECO8A (Glycogen synthase OS=Escherichia coli O8 (strain IAI1) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1 
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407
The following BLAST results are available for this feature:
BLAST of EY675627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 349
Match NameE-valueIdentityDescription
GLGA_ECOLU8.434e-2149.56Glycogen synthase OS=Escherichia coli O17:K52:H18 ... [more]
GLGA_ECOLI8.434e-2149.56Glycogen synthase OS=Escherichia coli (strain K12)... [more]
GLGA_ECOLC8.434e-2149.56Glycogen synthase OS=Escherichia coli (strain ATCC... [more]
GLGA_ECOL68.434e-2149.56Glycogen synthase OS=Escherichia coli O6 GN=glgA P... [more]
GLGA_ECOL58.434e-2149.56Glycogen synthase OS=Escherichia coli O6:K15:H31 (... [more]
GLGA_ECOK18.434e-2149.56Glycogen synthase OS=Escherichia coli O1:K1 / APEC... [more]
GLGA_ECOHS8.434e-2149.56Glycogen synthase OS=Escherichia coli O9:H4 (strai... [more]
GLGA_ECODH8.434e-2149.56Glycogen synthase OS=Escherichia coli (strain K12 ... [more]
GLGA_ECOBW8.434e-2149.56Glycogen synthase OS=Escherichia coli (strain K12 ... [more]
GLGA_ECO8A8.434e-2149.56Glycogen synthase OS=Escherichia coli O8 (strain I... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-B04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675627 ID=EY675627; Name=EY675627; organism=Citrus sinensis; type=EST; length=936bp
CGCTTAACACATCCCAAAGGAATCCATCTCATCAAGCATGCAATTTGGCG
AACATTAGATCGCGGTGGTCAGGTTGTGTTGCTTGGTTCAGCTCCGGATC
CCCGAATCCAGAATGATTTTGTGAATTTAGCTAATGAGTTGCATTCTTCT
CATGCGGACCGCGCTCGTCTTTGTTTGACTTATGATGAGCCACTTTCCCA
CCTGATTTATGCTGGGGCCGATTTCATTCTAGTTCCTTCAATCTTTGAGC
CATGTGGACTGACACAACTTGTGGCTATGAGATATGGTTCAATACCAGTG
GTTCGGAAAACTGGAGGACTTTATGACACTGTATTTGATGTTGACCATGA
TAAAGAGAGAGCACAAGCCCTAGATCTTGAAACCAAATGGATTTAATTTT
GATGGAGCTGATATTGCTGGAGTCAATTTATGCTCTTAATAGGGCAATTT
CTGCTTTATTATGATGGTCGAGAGTGGGTTGGAAACTCCATTAATGCAGA
ACAGTGATGGAACAAGAACGGGTCTTGGAATCCCCCCTGCTCTTGACTAA
TATGGAAGCTTTTCCCGTGCACCCCGCAAGTGAAAAAAAAAATATTGATC
GGGGTGGAAAAAACCCCATGGCCACTCCTTTCCCCCTCCCAAGTTTTGGA
ACGGGTTCAAGGGGGAAAAATCTTTGGTTTTGAATATTTACCGCCCTTTT
ATATCACCCCAAATTTGGAATTAAAAAATTTTCCCCCACATTTGGGAATT
TTAAAAATTTTCCCCCCCAGGGGCCCGGGGAACGCTTTAAGAGGGGGGTT
CTCCACAATTTTTTCAGGGAGGGACAAAGAAATTATTAGGGCGCAGTTTT
TAAAATTTTTTTTTTTATTTTTTTTTAATCCGCGGTAGGACATACATGCG
CCCAATACGAGAAAAAAAAAAAACATAAAACTACCT
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