EY675627

Overview
NameEY675627
Unique NameEY675627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECO81 (Glycogen synthase OS=Escherichia coli O81 (strain ED1a) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECO7I (Glycogen synthase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECO5E (Glycogen synthase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECO57 (Glycogen synthase OS=Escherichia coli O157:H7 GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECO55 (Glycogen synthase OS=Escherichia coli (strain 55989 / EAEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECO45 (Glycogen synthase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECO27 (Glycogen synthase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ECO24 (Glycogen synthase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+ LLG A DP +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDLVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAAAE----YPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTB (Glycogen synthase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 48/111 (43.24%), Postives = 71/111 (63.96%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTV 333
            R+   KG H +K AI   L+    ++++G+    ++  +F NL   L +S     R+ LTY + L+  I+A AD I +PS+FEPCGLTQ++ MRYG++P+VR TGGL DTV
Sbjct:  303 RIAEQKGPHFMKQAILHALENAYTLIIIGTCYGNQLHEEFANLQESLANS--PNVRILLTYSDVLARQIFAAADMICIPSMFEPCGLTQMIGMRYGTVPLVRATGGLADTV 411          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTA (Glycogen synthase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 48/111 (43.24%), Postives = 71/111 (63.96%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTV 333
            R+   KG H +K AI   L+    ++++G+    ++  +F NL   L +S     R+ LTY + L+  I+A AD I +PS+FEPCGLTQ++ MRYG++P+VR TGGL DTV
Sbjct:  303 RIAEQKGPHFMKQAILHALENAYTLIIIGTCYGNQLHEEFANLQESLANS--PNVRILLTYSDVLARQIFAAADMICIPSMFEPCGLTQMIGMRYGTVPLVRATGGLADTV 411          
The following BLAST results are available for this feature:
BLAST of EY675627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 349
Match NameE-valueIdentityDescription
GLGA_ECO818.434e-2149.56Glycogen synthase OS=Escherichia coli O81 (strain ... [more]
GLGA_ECO7I8.434e-2149.56Glycogen synthase OS=Escherichia coli O7:K1 (strai... [more]
GLGA_ECO5E8.434e-2149.56Glycogen synthase OS=Escherichia coli O157:H7 (str... [more]
GLGA_ECO578.434e-2149.56Glycogen synthase OS=Escherichia coli O157:H7 GN=g... [more]
GLGA_ECO558.434e-2149.56Glycogen synthase OS=Escherichia coli (strain 5598... [more]
GLGA_ECO458.434e-2149.56Glycogen synthase OS=Escherichia coli O45:K1 (stra... [more]
GLGA_ECO278.434e-2149.56Glycogen synthase OS=Escherichia coli O127:H6 (str... [more]
GLGA_ECO248.434e-2149.56Glycogen synthase OS=Escherichia coli O139:H28 (st... [more]
GLGA_CHLTB8.434e-2143.24Glycogen synthase OS=Chlamydia trachomatis (strain... [more]
GLGA_CHLTA8.434e-2143.24Glycogen synthase OS=Chlamydia trachomatis (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-B04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675627 ID=EY675627; Name=EY675627; organism=Citrus sinensis; type=EST; length=936bp
CGCTTAACACATCCCAAAGGAATCCATCTCATCAAGCATGCAATTTGGCG
AACATTAGATCGCGGTGGTCAGGTTGTGTTGCTTGGTTCAGCTCCGGATC
CCCGAATCCAGAATGATTTTGTGAATTTAGCTAATGAGTTGCATTCTTCT
CATGCGGACCGCGCTCGTCTTTGTTTGACTTATGATGAGCCACTTTCCCA
CCTGATTTATGCTGGGGCCGATTTCATTCTAGTTCCTTCAATCTTTGAGC
CATGTGGACTGACACAACTTGTGGCTATGAGATATGGTTCAATACCAGTG
GTTCGGAAAACTGGAGGACTTTATGACACTGTATTTGATGTTGACCATGA
TAAAGAGAGAGCACAAGCCCTAGATCTTGAAACCAAATGGATTTAATTTT
GATGGAGCTGATATTGCTGGAGTCAATTTATGCTCTTAATAGGGCAATTT
CTGCTTTATTATGATGGTCGAGAGTGGGTTGGAAACTCCATTAATGCAGA
ACAGTGATGGAACAAGAACGGGTCTTGGAATCCCCCCTGCTCTTGACTAA
TATGGAAGCTTTTCCCGTGCACCCCGCAAGTGAAAAAAAAAATATTGATC
GGGGTGGAAAAAACCCCATGGCCACTCCTTTCCCCCTCCCAAGTTTTGGA
ACGGGTTCAAGGGGGAAAAATCTTTGGTTTTGAATATTTACCGCCCTTTT
ATATCACCCCAAATTTGGAATTAAAAAATTTTCCCCCACATTTGGGAATT
TTAAAAATTTTCCCCCCCAGGGGCCCGGGGAACGCTTTAAGAGGGGGGTT
CTCCACAATTTTTTCAGGGAGGGACAAAGAAATTATTAGGGCGCAGTTTT
TAAAATTTTTTTTTTTATTTTTTTTTAATCCGCGGTAGGACATACATGCG
CCCAATACGAGAAAAAAAAAAAACATAAAACTACCT
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