EY675627

Overview
NameEY675627
Unique NameEY675627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_CHLT2 (Glycogen synthase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 48/111 (43.24%), Postives = 71/111 (63.96%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTV 333
            R+   KG H +K AI   L+    ++++G+    ++  +F NL   L +S     R+ LTY + L+  I+A AD I +PS+FEPCGLTQ++ MRYG++P+VR TGGL DTV
Sbjct:  303 RIAEQKGPHFMKQAILHALENAYTLIIIGTCYGNQLHEEFANLQESLANS--PNVRILLTYSDVLARQIFAAADMICIPSMFEPCGLTQMIGMRYGTVPLVRATGGLADTV 411          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIME (Glycogen synthase 1 OS=Rhizobium meliloti GN=glgA1 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 55/115 (47.83%), Postives = 74/115 (64.35%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVD 345
            RLT  KG+ L+  A    +  GG++V+LGS  DP +++  +  A    S +     +   YDEPLSHL+ AGAD IL+PS FEPCGLTQL  +RYG +PVV +TGGL DT+ D +
Sbjct:  300 RLTWQKGMDLVAEAADDIVALGGKLVVLGSG-DPALESALMAAA----SRNRGHIGMVTGYDEPLSHLMQAGADAILIPSRFEPCGLTQLYGLRYGCVPVVARTGGLTDTIIDAN 409          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_RHOFD (Glycogen synthase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=glgA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.439e-20
Identity = 53/113 (46.90%), Postives = 72/113 (63.72%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+HL+   +   + RGGQ+ LLG   D  ++  FV+ A      +  +  + + YDE  +H + AGAD ILVPS FEPCGLTQL  +RYG++P+VR+ GGL DTV D
Sbjct:  313 RLTEQKGLHLLPQVLADMVQRGGQLALLGQG-DVALERAFVDAAIR----YPGQVGVRIGYDEVTAHAVIAGADVILVPSEFEPCGLTQLYGLRYGTLPLVRRVGGLADTVVD 420          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIN (Glycogen synthase OS=Haemophilus influenzae GN=glgA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.439e-20
Identity = 55/122 (45.08%), Postives = 77/122 (63.11%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQ 366
            RLT  KG+ L+  +    + +GGQ+++LGS   P ++     LA     + A +    + YDE LSHL+ AG D ILVPS FEPCGLTQL  ++YG++P+VRKTGGL DTV D   +  +A+
Sbjct:  300 RLTEQKGVDLLIESADEIVKQGGQLMILGSGA-PHLEQGIRELAERYPQNIAVK----IGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTVVDSTSESIKAR 416          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_ERWT9 (Glycogen synthase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=glgA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.439e-20
Identity = 56/113 (49.56%), Postives = 75/113 (66.37%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L++GGQ+V+LG A D  +Q  F+  A E    +  +  + + Y E  SH I  GAD ILVPS FEPCGLTQL A++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTKQKGLDLVLEALPGLLEQGGQLVVLG-AGDAELQQGFLAAAAE----NPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYALKYGTLPLVRRTGGLADTVND 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTR (Glycogen synthase OS=Chlamydia trachomatis GN=glgA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.439e-20
Identity = 48/111 (43.24%), Postives = 71/111 (63.96%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTV 333
            R+   KG H +K AI   L+    ++++G+    ++  +F NL   L +S     R+ LTY + L+  I+A AD I +PS+FEPCGLTQ++ MRYG++P+VR TGGL DTV
Sbjct:  303 RIAEQKGPHFMKQAILHALENAYTLIIIGTCYGNQLHEEFANLQESLANS--PDVRILLTYSDVLARQIFAAADMICIPSMFEPCGLTQMIGMRYGTVPLVRATGGLADTV 411          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_CHLMU (Glycogen synthase OS=Chlamydia muridarum GN=glgA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.439e-20
Identity = 50/113 (44.25%), Postives = 70/113 (61.95%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            R+   KG   +K AI   L+    ++++G+    +I  +F NL   L  S     R+ LTY + L+  I+A AD I +PS+FEPCGLTQ++ MRYG++PVVR TGGL DTV D
Sbjct:  303 RIAEQKGPEFMKQAILHALENAYTLIIIGTCYGGQIHKEFSNLQESLADS--PNVRILLTYSDVLARQIFAAADMICIPSMFEPCGLTQMIGMRYGTVPVVRATGGLADTVTD 413          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_CHLAB (Glycogen synthase OS=Chlamydophila abortus GN=glgA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.439e-20
Identity = 51/111 (45.95%), Postives = 67/111 (60.36%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTV 333
            R+   KG   +K AI   ++    +V+ G+  D   Q  F NL   L +S     R+ L Y++PL  LIY  AD I +PS FEPCGLTQL+ MRYG++P+VR TGGL DTV
Sbjct:  302 RIVEQKGPEFMKAAILHAMENSYALVIAGTCYDQETQRQFTNLQESLTTS--PNIRIILDYNDPLVRLIYGAADMICIPSHFEPCGLTQLIGMRYGTVPLVRSTGGLADTV 410          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_YERP3 (Glycogen synthase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=glgA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.879e-20
Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L  GGQ+V+LGS  D  +Q  F+  A E    H+ +  + + Y E  SH I AG+D ILVPS FEPCGLTQL  ++YG++P+VR TGGL DTV D
Sbjct:  300 RLTAQKGLDLVLEALPELLALGGQLVVLGSG-DTTLQEAFLAAAAE----HSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_PECCP (Glycogen synthase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=glgA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.879e-20
Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ +   AI   L++GGQVV+LG A D  +Q  F+  A E H     +  + + Y E  SH I  GAD I+VPS FEPCGLTQL  ++YG++P+VR+TGGL DTV D
Sbjct:  300 RLTSQKGLDIALSAIPDLLEQGGQVVVLG-AGDADLQEGFLAAAAEYHG----QVGVQIGYHEAFSHRIIGGADVIMVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
The following BLAST results are available for this feature:
BLAST of EY675627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 349
Match NameE-valueIdentityDescription
GLGA_CHLT28.434e-2143.24Glycogen synthase OS=Chlamydia trachomatis (strain... [more]
GLGA1_RHIME8.434e-2147.83Glycogen synthase 1 OS=Rhizobium meliloti GN=glgA1... [more]
GLGA_RHOFD1.439e-2046.90Glycogen synthase OS=Rhodoferax ferrireducens (str... [more]
GLGA_HAEIN1.439e-2045.08Glycogen synthase OS=Haemophilus influenzae GN=glg... [more]
GLGA_ERWT91.439e-2049.56Glycogen synthase OS=Erwinia tasmaniensis (strain ... [more]
GLGA_CHLTR1.439e-2043.24Glycogen synthase OS=Chlamydia trachomatis GN=glgA... [more]
GLGA_CHLMU1.439e-2044.25Glycogen synthase OS=Chlamydia muridarum GN=glgA P... [more]
GLGA_CHLAB1.439e-2045.95Glycogen synthase OS=Chlamydophila abortus GN=glgA... [more]
GLGA_YERP31.879e-2049.56Glycogen synthase OS=Yersinia pseudotuberculosis s... [more]
GLGA_PECCP1.879e-2049.56Glycogen synthase OS=Pectobacterium carotovorum su... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-B04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675627 ID=EY675627; Name=EY675627; organism=Citrus sinensis; type=EST; length=936bp
CGCTTAACACATCCCAAAGGAATCCATCTCATCAAGCATGCAATTTGGCG
AACATTAGATCGCGGTGGTCAGGTTGTGTTGCTTGGTTCAGCTCCGGATC
CCCGAATCCAGAATGATTTTGTGAATTTAGCTAATGAGTTGCATTCTTCT
CATGCGGACCGCGCTCGTCTTTGTTTGACTTATGATGAGCCACTTTCCCA
CCTGATTTATGCTGGGGCCGATTTCATTCTAGTTCCTTCAATCTTTGAGC
CATGTGGACTGACACAACTTGTGGCTATGAGATATGGTTCAATACCAGTG
GTTCGGAAAACTGGAGGACTTTATGACACTGTATTTGATGTTGACCATGA
TAAAGAGAGAGCACAAGCCCTAGATCTTGAAACCAAATGGATTTAATTTT
GATGGAGCTGATATTGCTGGAGTCAATTTATGCTCTTAATAGGGCAATTT
CTGCTTTATTATGATGGTCGAGAGTGGGTTGGAAACTCCATTAATGCAGA
ACAGTGATGGAACAAGAACGGGTCTTGGAATCCCCCCTGCTCTTGACTAA
TATGGAAGCTTTTCCCGTGCACCCCGCAAGTGAAAAAAAAAATATTGATC
GGGGTGGAAAAAACCCCATGGCCACTCCTTTCCCCCTCCCAAGTTTTGGA
ACGGGTTCAAGGGGGAAAAATCTTTGGTTTTGAATATTTACCGCCCTTTT
ATATCACCCCAAATTTGGAATTAAAAAATTTTCCCCCACATTTGGGAATT
TTAAAAATTTTCCCCCCCAGGGGCCCGGGGAACGCTTTAAGAGGGGGGTT
CTCCACAATTTTTTCAGGGAGGGACAAAGAAATTATTAGGGCGCAGTTTT
TAAAATTTTTTTTTTTATTTTTTTTTAATCCGCGGTAGGACATACATGCG
CCCAATACGAGAAAAAAAAAAAACATAAAACTACCT
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