EY675627

Overview
NameEY675627
Unique NameEY675627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIG (Glycogen synthase OS=Haemophilus influenzae (strain PittGG) GN=glgA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.879e-20
Identity = 55/121 (45.45%), Postives = 76/121 (62.81%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERA 363
            RLT  KG+ L+  +    + +GGQ+++LGS   P ++     LA     + A +    + YDE LSHL+ AG D ILVPS FEPCGLTQL  ++YG++P+VRKTGGL DTV D   +  +A
Sbjct:  300 RLTEQKGVDLLIESADEIVKQGGQLMILGSGA-PHLEQGIRELAERYPQNIAVK----IGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTVVDSTSESIKA 415          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_CHLFF (Glycogen synthase OS=Chlamydophila felis (strain Fe/C-56) GN=glgA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.879e-20
Identity = 50/111 (45.05%), Postives = 66/111 (59.46%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTV 333
            R+   KG   +K AI   ++ G   +L+G   D   Q  F NL   L  S     R+ L Y+EPL+ L+Y  AD + +PS FEPCGLTQL+ MRYG++P+ R TGGL DTV
Sbjct:  302 RIVEQKGPEFMKAAILHAMENGYAFILVGKCYDEETQRKFSNLQESLTMS--PNVRIILDYNEPLARLLYGAADMLCIPSHFEPCGLTQLIGMRYGTVPLARATGGLADTV 410          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_AERS4 (Glycogen synthase OS=Aeromonas salmonicida (strain A449) GN=glgA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.879e-20
Identity = 55/124 (44.35%), Postives = 79/124 (63.71%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSS---HADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERA 363
            RLT  KG+HL+   + + L    QVV++GS  DP       +LA +L ++   + D+     TYD+ L+HL+ AGADF L+PS+FEPCGL Q+ ++ YG++P+VR  GGL DTV D D + E A
Sbjct:  308 RLTEQKGVHLLLPVLDKFLHHKVQVVIVGSG-DP-------SLAAQLQATAQRYPDKLAFLNTYDDRLAHLVEAGADFFLMPSLFEPCGLNQMYSLAYGTLPLVRAVGGLKDTVVDWDAEPEHA 423          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_YERPY (Glycogen synthase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=glgA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.454e-20
Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L  GGQ+V+LGS  D  +Q  F+  A E    H+ +  + + Y E  SH I AG+D ILVPS FEPCGLTQL  ++YG++P+VR TGGL DTV D
Sbjct:  300 RLTVQKGLDLVLEALPELLALGGQLVVLGSG-DATLQEAFLAAAAE----HSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_YERPS (Glycogen synthase OS=Yersinia pseudotuberculosis GN=glgA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.454e-20
Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L  GGQ+V+LGS  D  +Q  F+  A E    H+ +  + + Y E  SH I AG+D ILVPS FEPCGLTQL  ++YG++P+VR TGGL DTV D
Sbjct:  300 RLTVQKGLDLVLEALPELLALGGQLVVLGSG-DATLQEAFLAAAAE----HSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_YERPP (Glycogen synthase OS=Yersinia pestis (strain Pestoides F) GN=glgA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.454e-20
Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L  GGQ+V+LGS  D  +Q  F+  A E    H+ +  + + Y E  SH I AG+D ILVPS FEPCGLTQL  ++YG++P+VR TGGL DTV D
Sbjct:  300 RLTVQKGLDLVLEALPELLALGGQLVVLGSG-DATLQEAFLAAAAE----HSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_YERPN (Glycogen synthase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=glgA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.454e-20
Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L  GGQ+V+LGS  D  +Q  F+  A E    H+ +  + + Y E  SH I AG+D ILVPS FEPCGLTQL  ++YG++P+VR TGGL DTV D
Sbjct:  300 RLTVQKGLDLVLEALPELLALGGQLVVLGSG-DATLQEAFLAAAAE----HSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_YERPG (Glycogen synthase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=glgA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.454e-20
Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L  GGQ+V+LGS  D  +Q  F+  A E    H+ +  + + Y E  SH I AG+D ILVPS FEPCGLTQL  ++YG++P+VR TGGL DTV D
Sbjct:  300 RLTVQKGLDLVLEALPELLALGGQLVVLGSG-DATLQEAFLAAAAE----HSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_YERPE (Glycogen synthase OS=Yersinia pestis GN=glgA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.454e-20
Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L  GGQ+V+LGS  D  +Q  F+  A E    H+ +  + + Y E  SH I AG+D ILVPS FEPCGLTQL  ++YG++P+VR TGGL DTV D
Sbjct:  300 RLTVQKGLDLVLEALPELLALGGQLVVLGSG-DATLQEAFLAAAAE----HSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
BLAST of EY675627 vs. ExPASy Swiss-Prot
Match: GLGA_YERPB (Glycogen synthase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=glgA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.454e-20
Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 1
Query:    1 RLTHPKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 339
            RLT  KG+ L+  A+   L  GGQ+V+LGS  D  +Q  F+  A E    H+ +  + + Y E  SH I AG+D ILVPS FEPCGLTQL  ++YG++P+VR TGGL DTV D
Sbjct:  300 RLTVQKGLDLVLEALPELLALGGQLVVLGSG-DATLQEAFLAAAAE----HSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVD 407          
The following BLAST results are available for this feature:
BLAST of EY675627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 349
Match NameE-valueIdentityDescription
GLGA_HAEIG1.879e-2045.45Glycogen synthase OS=Haemophilus influenzae (strai... [more]
GLGA_CHLFF1.879e-2045.05Glycogen synthase OS=Chlamydophila felis (strain F... [more]
GLGA_AERS41.879e-2044.35Glycogen synthase OS=Aeromonas salmonicida (strain... [more]
GLGA_YERPY2.454e-2049.56Glycogen synthase OS=Yersinia pseudotuberculosis s... [more]
GLGA_YERPS2.454e-2049.56Glycogen synthase OS=Yersinia pseudotuberculosis G... [more]
GLGA_YERPP2.454e-2049.56Glycogen synthase OS=Yersinia pestis (strain Pesto... [more]
GLGA_YERPN2.454e-2049.56Glycogen synthase OS=Yersinia pestis bv. Antiqua (... [more]
GLGA_YERPG2.454e-2049.56Glycogen synthase OS=Yersinia pestis bv. Antiqua (... [more]
GLGA_YERPE2.454e-2049.56Glycogen synthase OS=Yersinia pestis GN=glgA PE=3 ... [more]
GLGA_YERPB2.454e-2049.56Glycogen synthase OS=Yersinia pseudotuberculosis s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-B04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675627 ID=EY675627; Name=EY675627; organism=Citrus sinensis; type=EST; length=936bp
CGCTTAACACATCCCAAAGGAATCCATCTCATCAAGCATGCAATTTGGCG
AACATTAGATCGCGGTGGTCAGGTTGTGTTGCTTGGTTCAGCTCCGGATC
CCCGAATCCAGAATGATTTTGTGAATTTAGCTAATGAGTTGCATTCTTCT
CATGCGGACCGCGCTCGTCTTTGTTTGACTTATGATGAGCCACTTTCCCA
CCTGATTTATGCTGGGGCCGATTTCATTCTAGTTCCTTCAATCTTTGAGC
CATGTGGACTGACACAACTTGTGGCTATGAGATATGGTTCAATACCAGTG
GTTCGGAAAACTGGAGGACTTTATGACACTGTATTTGATGTTGACCATGA
TAAAGAGAGAGCACAAGCCCTAGATCTTGAAACCAAATGGATTTAATTTT
GATGGAGCTGATATTGCTGGAGTCAATTTATGCTCTTAATAGGGCAATTT
CTGCTTTATTATGATGGTCGAGAGTGGGTTGGAAACTCCATTAATGCAGA
ACAGTGATGGAACAAGAACGGGTCTTGGAATCCCCCCTGCTCTTGACTAA
TATGGAAGCTTTTCCCGTGCACCCCGCAAGTGAAAAAAAAAATATTGATC
GGGGTGGAAAAAACCCCATGGCCACTCCTTTCCCCCTCCCAAGTTTTGGA
ACGGGTTCAAGGGGGAAAAATCTTTGGTTTTGAATATTTACCGCCCTTTT
ATATCACCCCAAATTTGGAATTAAAAAATTTTCCCCCACATTTGGGAATT
TTAAAAATTTTCCCCCCCAGGGGCCCGGGGAACGCTTTAAGAGGGGGGTT
CTCCACAATTTTTTCAGGGAGGGACAAAGAAATTATTAGGGCGCAGTTTT
TAAAATTTTTTTTTTTATTTTTTTTTAATCCGCGGTAGGACATACATGCG
CCCAATACGAGAAAAAAAAAAAACATAAAACTACCT
back to top