EY675624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675624 vs. ExPASy Swiss-Prot
Match: DCEB_SHIFL (Glutamate decarboxylase beta OS=Shigella flexneri GN=gadB PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.023e-18 Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 4 TFTLTFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK--RHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLD 375 TF + FS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LKD + + ++++E LR GW VPA+T+ +A I V+R++ R F AE L+ D Sbjct: 312 TFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLED 440
BLAST of EY675624 vs. ExPASy Swiss-Prot
Match: DCEB_ECOLI (Glutamate decarboxylase beta OS=Escherichia coli (strain K12) GN=gadB PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.023e-18 Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 4 TFTLTFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK--RHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLD 375 TF + FS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LKD + + ++++E LR GW VPA+T+ +A I V+R++ R F AE L+ D Sbjct: 312 TFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLED 440
BLAST of EY675624 vs. ExPASy Swiss-Prot
Match: DCEB_ECOL6 (Glutamate decarboxylase beta OS=Escherichia coli O6 GN=gadB PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 2.023e-18 Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 4 TFTLTFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK--RHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLD 375 TF + FS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LKD + + ++++E LR GW VPA+T+ +A I V+R++ R F AE L+ D Sbjct: 312 TFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLED 440
BLAST of EY675624 vs. ExPASy Swiss-Prot
Match: DCEB_ECO57 (Glutamate decarboxylase beta OS=Escherichia coli O157:H7 GN=gadB PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.023e-18 Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 4 TFTLTFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK--RHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLD 375 TF + FS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LKD + + ++++E LR GW VPA+T+ +A I V+R++ R F AE L+ D Sbjct: 312 TFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLED 440
BLAST of EY675624 vs. ExPASy Swiss-Prot
Match: DCEA_SHIFL (Glutamate decarboxylase alpha OS=Shigella flexneri GN=gadA PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 2.023e-18 Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 4 TFTLTFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK--RHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLD 375 TF + FS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LKD + + ++++E LR GW VPA+T+ +A I V+R++ R F AE L+ D Sbjct: 312 TFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKQGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLED 440
BLAST of EY675624 vs. ExPASy Swiss-Prot
Match: DCEA_ECOLI (Glutamate decarboxylase alpha OS=Escherichia coli (strain K12) GN=gadA PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.023e-18 Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 4 TFTLTFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK--RHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLD 375 TF + FS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LKD + + ++++E LR GW VPA+T+ +A I V+R++ R F AE L+ D Sbjct: 312 TFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLED 440
BLAST of EY675624 vs. ExPASy Swiss-Prot
Match: DCEA_ECOL6 (Glutamate decarboxylase alpha OS=Escherichia coli O6 GN=gadA PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.023e-18 Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 4 TFTLTFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK--RHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLD 375 TF + FS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LKD + + ++++E LR GW VPA+T+ +A I V+R++ R F AE L+ D Sbjct: 312 TFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLED 440
BLAST of EY675624 vs. ExPASy Swiss-Prot
Match: DCEA_ECO57 (Glutamate decarboxylase alpha OS=Escherichia coli O157:H7 GN=gadA PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.885e-18 Identity = 49/129 (37.98%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 4 TFTLTFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK--RHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLD 375 TF + FS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LK+ + + ++++E LR GW VPA+T+ +A I V+R++ R F AE L+ D Sbjct: 312 TFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKEGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLED 440
BLAST of EY675624 vs. ExPASy Swiss-Prot
Match: DCEA_LISMO (Glutamate decarboxylase alpha OS=Listeria monocytogenes GN=gadA PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 1.004e-17 Identity = 43/134 (32.09%), Postives = 74/134 (55.22%), Query Frame = 1 Query: 1 PTFTLTFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKD--NKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHE 396 PT + FS+ +SQ+I QYY +R G+EGYR + + A+ L + + +TG F I + +P+V + LKD N +++A+ L+ GW VPAY +P + + + R V R D + + D+++ + E Sbjct: 308 PTMAINFSRSASQIIGQYYNFLRFGYEGYRQIHMRTRDGALQLSQAVAETGLFEIYNDGANLPIVCYKLKDDANVAWTLYDLADRLQMKGWQVPAYPLPKEMGNTIIQRYVCRGDLGQNMVTAFKNDLSESIEE 441
BLAST of EY675624 vs. ExPASy Swiss-Prot
Match: GADB_DICDI (Glutamate decarboxylase B OS=Dictyostelium discoideum GN=gadB PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.734e-15 Identity = 44/134 (32.84%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 4 TFTLTFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEG-VPLVAFSLKDNKRHDE----FEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 390 TF+L FS+ Q+IAQYY +R G GY + + C + + + + L+K G F+++ G +P V +++ N + ++++E LR GW V +Y++P+ + V RVVIR FSR L+ V D+ + Sbjct: 308 TFSLNFSRPGGQIIAQYYNFLRHGRNGYTLIQDACAQQGIFIGKELKKMGIFDLIYDGTGALPGVCWTISKNLPSEPLFNLYDLSEKLRSRGWQVASYSLPSSMNDVVVSRVVIRHGFSRDLSSLFVKDVQNAI 441 The following BLAST results are available for this feature:
BLAST of EY675624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675624 ID=EY675624; Name=EY675624; organism=Citrus sinensis; type=EST; length=863bpback to top |