EY675621

Overview
NameEY675621
Unique NameEY675621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: FDH1_YEAST (Formate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=FDH1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.486e-38
Identity = 85/182 (46.70%), Postives = 112/182 (61.54%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEK---ETGAKFE---------EDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            IL+L+RN+  GH Q  +GEW++AGVA   YDLE K + TVG GRIG  +L+RL  FN   LLY+D  ++  +      E    F          E L+ M+ + D+V +N PL + +RG+F+K  I+ MK G  +VN ARGAI   + V +A  SG LAGY GDVW+ QPAPKDHPWR M N
Sbjct:  133 ILVLIRNYNGGHQQAINGEWDIAGVAKNEYDLEDKIISTVGAGRIGYRVLERLVAFNPKKLLYYDYQELPAEAINRLNEASKLFNGRGDIVQRVEKLEDMVAQSDVVTINCPLHKDSRGLFNKKLISHMKDGAYLVNTARGAICVAEDVAEAVKSGKLAGYGGDVWDKQPAPKDHPWRTMDN 314          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.848e-25
Identity = 62/162 (38.27%), Postives = 98/162 (60.49%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP 494
            +L   R  +   H   SGEW   G+A+       YD+ GKT+G VG GRIG+ + +R + F   +LY+ R +  P+ EKE GA+F   L+ +L + D VV+  PLT++T+ M +++R+  MKK  ++VN ARG ++DT+A++ A   G +AG   DV+  +P
Sbjct:  112 LLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQAVARRARGFGMRILYYSRSRK-PEAEKELGAEFRS-LEDLLRESDFVVLAVPLTKETQYMINEERLRLMKKTAILVNIARGKVVDTKALMKALKEGWIAGAGLDVYEEEP 271          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: YN14_YEAST (Putative 2-hydroxyacid dehydrogenase YNL274C OS=Saccharomyces cerevisiae GN=YNL274C PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25
Identity = 68/161 (42.24%), Postives = 97/161 (60.25%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVAGVAYRA---YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP 494
            +L  +RNF  G+ ++  G W  AG A  +   YD EGKTVG +G GRIG+ +L+RLKPF   N +YH+R ++    E+E G ++    +  L + DIV VN PL   T  + + + I KMK GV+IVN ARGA++D QA+ DA  SG +     DV+  +P
Sbjct:  127 LLGALRNFGIGNRRLIEGNWPEAGPACGSPFGYDPEGKTVGILGLGRIGRCILERLKPFGFENFIYHNRHQLPS--EEEHGCEYV-GFEEFLKRSDIVSVNVPLNHNTHHLINAETIEKMKDGVVIVNTARGAVIDEQAMTDALRSGKIRSAGLDVFEYEP 284          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25
Identity = 61/162 (37.65%), Postives = 99/162 (61.11%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP 494
            +L   R+ + G   V SGEW   GVA+       YD+ GKT+G +G GRIG+ + +R K FN  +LY+ R + + ++E+E  A+F+  L+ +L + D VV+  PLT +T  + +++R+  MKK  +++N ARG ++DT A+V A   G +AG   DV+  +P
Sbjct:  112 LLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEFKP-LEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP 271          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.377e-25
Identity = 64/162 (39.51%), Postives = 97/162 (59.88%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP 494
            +L   R  +     V SGEW   GVA+       YD+ G+T+G VG GRIG+ + +R K F   +LY+ R +  P++EKE GA+F   LD +L + D VV+  PLT++T  M +++R+  MK   ++VN ARG ++DT+A+V A   G +AG   DV+  +P
Sbjct:  112 LLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIARRAKGFGMRILYNSRTRK-PEVEKELGAEFMP-LDELLKESDFVVLVVPLTKETYHMINEERLKLMKPTAILVNIARGKVVDTEALVKALREGWIAGAGLDVFEEEP 271          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.023e-25
Identity = 62/162 (38.27%), Postives = 98/162 (60.49%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP 494
            +L   R+ + G   V SGEW   G+A+       Y+L GKT+G VG GRIG+ + +R K FN  +LY+ R +   Q EKE GA++   L+ +L + D V++  PLT++T  M +++R+  MK   ++VN ARG ++DT+A++ A   G +AG   DV+  +P
Sbjct:  112 LLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIARRAKGFNMRILYYSRTRKS-QAEKELGAEYRP-LEEVLKESDFVILAVPLTKETMYMINEERLKLMKPTAILVNIARGKVVDTKALIKALKEGWIAGAGLDVFEEEP 271          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.172e-25
Identity = 59/162 (36.42%), Postives = 99/162 (61.11%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP 494
            +L   R+ + G     SGEW   GVA+       YD+ GKT+G +G GRIG+ + +R + F+  +LY+ R +  P++EKE  A+F+  LD +L + D VV+  PL ++T  M +++R+  MK+  +++N ARG ++DT+A++ A   G +AG   DV+  +P
Sbjct:  113 LLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRK-PEVEKELNAEFKP-LDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEP 272          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.485e-24
Identity = 62/167 (37.13%), Postives = 100/167 (59.88%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVAGVAY--RAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEE--DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHP 512
            IL + R  +     + +G+W+     Y     +L+GKT+G VG GRIG    +RL  F+  +LY+D   ++ + + ET     E  DLDT+L K DIV ++ PLT++T  + +++R+ KMKK   ++N ARG ++DT+A+V A   G +AG + DV+  +P P +HP
Sbjct:  114 ILAVTRRIVEADKIIRTGQWDKPWNPYFLTGPELKGKTIGLVGLGRIGVATAKRLSSFDVKILYYD---IERRWDVETVIPNMEFTDLDTLLEKSDIVSIHVPLTKETYHLINEERLRKMKKTAYLINTARGPVVDTEALVKALKEGWIAGAALDVFEQEPLPPNHP 277          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.912e-22
Identity = 56/162 (34.57%), Postives = 94/162 (58.02%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP 494
            +L + R  +     V SGEW  + V +       Y L+GKT+G VG GRIG+ L +R K F   ++Y+ R +  P+ E+E GA++  D +T+L + D + ++ PLT++T  M  +  +  MK   +++N +RGA++DT A++ A   G +AG   DV+  +P
Sbjct:  112 LLAVARRIVEADAFVRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAKRAKGFGMKIIYYSRTRK-PEAEEEIGAEYV-DFETLLKESDFISLHVPLTKETYHMIGEKELKLMKPNAILINTSRGAVVDTNALIKALKEGWIAGAGLDVFEEEP 271          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: SERA_BACSU (D-3-phosphoglycerate dehydrogenase OS=Bacillus subtilis GN=serA PE=3 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 4.261e-22
Identity = 64/167 (38.32%), Postives = 94/167 (56.29%), Query Frame = 3
Query:   33 LVRNFLPGHHQVTSGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF---EEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPK----DHP 512
            L+R+    +  V S EWN    AY   +L GKT+G VG GRIG  + QR + F   +        DP L +E   K        + +L   DI+ V+TPLT++T+G+ +K+ IAK KKGV ++N ARG I+D  A+++A  +GH+AG + DV+  +P       DHP
Sbjct:  110 LMRHIPQANISVKSREWN--RTAYVGSELYGKTLGIVGLGRIGSEIAQRARAFGMTVHV-----FDPFLTEERAKKIGVNSRTFEEVLESADIITVHTPLTKETKGLLNKETIAKTKKGVRLINCARGGIIDEAALLEALENGHVAGAALDVFEVEPPVDNKLVDHP 269          
The following BLAST results are available for this feature:
BLAST of EY675621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
FDH1_YEAST2.486e-3846.70Formate dehydrogenase 1 OS=Saccharomyces cerevisia... [more]
GYAR_PYRKO1.848e-2538.27Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
YN14_YEAST4.117e-2542.24Putative 2-hydroxyacid dehydrogenase YNL274C OS=Sa... [more]
GYAR_PYRHO4.117e-2537.65Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
GYAR_THEON5.377e-2539.51Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_PYRFU7.023e-2538.27Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GYAR_PYRAB9.172e-2536.42Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_THEPD3.485e-2437.13Glyoxylate reductase OS=Thermofilum pendens (strai... [more]
GYAR_THELI1.912e-2234.57Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
SERA_BACSU4.261e-2238.32D-3-phosphoglycerate dehydrogenase OS=Bacillus sub... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-A08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675621 ID=EY675621; Name=EY675621; organism=Citrus sinensis; type=EST; length=906bp
CCACGCGTCCGGAGCTTATGAGAATCCTCCTTCTTGTCCGTAATTTCTTA
CCTGGACACCATCAAGTTACCAGTGGGGAATGGAATGTTGCAGGTGTTGC
TTATAGAGCTTATGATCTTGAAGGAAAGACAGTGGGAACTGTTGGTTGTG
GACGCATTGGCAAGCTGTTGCTCCAACGACTTAAACCTTTCAATTGTAAT
CTCCTTTATCATGACCGGGTGAAGATGGATCCTCAATTGGAGAAAGAGAC
TGGAGCAAAATTTGAGGAGGATCTAGATACTATGCTTCCCAAATGTGACA
TAGTTGTTGTCAACACCCCTCTAACAGAAAAGACGAGAGGGATGTTTGAC
AAAGATAGGATTGCAAAGATGAAGAAGGGCGTCTTGATTGTCAACAATGC
TCGAGGAGCAATCATGGACACACAAGCTGTTGTTGACGCTTGCTCTAGTG
GACACCTTGCAGGTTATAGTGGTGATGTTTGGAATCCACAACCAGCTCCA
AAGGACCATCCCTGGCGTTACATGCCCAATCCAGGCAATGACCCCTCTTG
TTTCTGGGACCACTTTTATTCCCACCTACGCTATGGCTGCGGGGAATCAA
GGAATATCCTTGGACAGAAACCTCANGGGGAAAAAAAATTTCCTGGTTCA
AATTTACATATTGGAGGGCGGGGGAAACTGGGCCCCCCAATATCAAAAAA
TTTACAATTGTGGAAAAAACGAGTGTGTTGGGAATTAATTCTCCATGTTA
AAACAGGGAACTTTCAGAAATATAAGGGTCCACTGTTTTTTGGTACCCTT
CCGGGCCCTTAGGGGGAAAAAACGTTTATGATAAATTTTGTTGAAATCCA
CCCACTATTAAAACAAAGGGGAAATAATAGAAAACCCCCCACGAAAAAAG
GGAAAA
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