EY675621

Overview
NameEY675621
Unique NameEY675621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: LDHD_STRP1 (D-lactate dehydrogenase OS=Streptococcus pyogenes serotype M1 GN=ldhD PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 38/130 (29.23%), Postives = 68/130 (52.31%), Query Frame = 3
Query:   93 GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVW 482
            G+  R   L   TV  +G GRIG    +  K F C ++ +D  + D     +    ++E ++  +   D+V ++ P T +   +F+ D     KKG +++N ARGA+++TQ ++DA  +G L+G   D +
Sbjct:  135 GLPIRGRVLGDMTVAIIGTGRIGLATAKIFKGFGCKVVGYDIYQSDAA---KAVLDYKESVEEAIKDADLVSLHMPPTAENTHLFNSDLFKSFKKGAILMNMARGAVIETQDLLDALDAGLLSGAGIDTY 261          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: CTBP2_RAT (C-terminal-binding protein 2 OS=Rattus norvegicus GN=Ctbp2 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 44/155 (28.39%), Postives = 77/155 (49.68%), Query Frame = 3
Query:   96 VAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP-APKDHPWRYMPNPGNDPSCFW 557
            VA  A  + G+T+G +G GR G+ +  R K F  +++++D    D  +E+  G +    L  +L + D V ++  L E    + +   I +M++G  +VN ARG ++D +A+  A   G + G + DV   +P +    P +  PN    P   W
Sbjct:  171 VASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQDG-IERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTAW 324          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: CTBP2_MOUSE (C-terminal-binding protein 2 OS=Mus musculus GN=Ctbp2 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 44/155 (28.39%), Postives = 77/155 (49.68%), Query Frame = 3
Query:   96 VAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP-APKDHPWRYMPNPGNDPSCFW 557
            VA  A  + G+T+G +G GR G+ +  R K F  +++++D    D  +E+  G +    L  +L + D V ++  L E    + +   I +M++G  +VN ARG ++D +A+  A   G + G + DV   +P +    P +  PN    P   W
Sbjct:  171 VASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQDG-IERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTAW 324          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: CTBP2_HUMAN (C-terminal-binding protein 2 OS=Homo sapiens GN=CTBP2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 44/155 (28.39%), Postives = 77/155 (49.68%), Query Frame = 3
Query:   96 VAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP-APKDHPWRYMPNPGNDPSCFW 557
            VA  A  + G+T+G +G GR G+ +  R K F  +++++D    D  +E+  G +    L  +L + D V ++  L E    + +   I +M++G  +VN ARG ++D +A+  A   G + G + DV   +P +    P +  PN    P   W
Sbjct:  171 VASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQDG-IERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTAW 324          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: PDXB_BACFR (Erythronate-4-phosphate dehydrogenase OS=Bacteroides fragilis GN=pdxB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 41/134 (30.60%), Postives = 69/134 (51.49%), Query Frame = 3
Query:  105 RAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE----KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP 494
            R   L   T+G VG G +G  +    +     ++ +D     P+ E+E    F   L ++  KCDI+  + PL +    KT  + DK     +KKG +I+N +RG +++T+A+++A  SG L+    DVW  +P
Sbjct:  111 RGMKLNQMTIGIVGVGNVGSKVADVARKLGIQVMLNDL----PREEREESTMFAS-LKSIAEKCDIITFHVPLYKEGKYKTYHLADKHFFHSLKKGAVIMNTSRGEVIETEALLEALRSGILSDAVIDVWEHEP 239          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: PDXB_BACFN (Erythronate-4-phosphate dehydrogenase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=pdxB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 41/134 (30.60%), Postives = 69/134 (51.49%), Query Frame = 3
Query:  105 RAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE----KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP 494
            R   L   T+G VG G +G  +    +     ++ +D     P+ E+E    F   L ++  KCDI+  + PL +    KT  + DK     +KKG +I+N +RG +++T+A+++A  SG L+    DVW  +P
Sbjct:  111 RGMKLNQMTIGIVGVGNVGSKVADVARKLGIQVMLNDL----PREEREESTMFAS-LKSIAEKCDIITFHVPLYKEGKYKTYHLADKHFFHSLKKGAVIMNTSRGEVIETEALLEALRSGILSDAVIDVWEHEP 239          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: CTBP2_BOVIN (C-terminal-binding protein 2 OS=Bos taurus GN=CTBP2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 45/155 (29.03%), Postives = 76/155 (49.03%), Query Frame = 3
Query:   96 VAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP-APKDHPWRYMPNPGNDPSCFW 557
            VA  A  + G+T+G +G GR G+ +  R K F  ++L++D    D   E+  G +    L  +L + D V ++  L E    + +   I +M++G  +VN ARG ++D +A+  A   G + G + DV   +P +    P +  PN    P   W
Sbjct:  171 VASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSVLFYDPYLQDGT-ERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTAW 324          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: PDXB_SHELP (Erythronate-4-phosphate dehydrogenase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=pdxB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11
Identity = 46/158 (29.11%), Postives = 79/158 (50.00%), Query Frame = 3
Query:   51 PGHHQVTSGEWN---VAGVAYRAYD-LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLT----EKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAP 500
            PG + V  GE+    +  +A R ++ L+GKTVG VG G  G  L + L+ +    L +     DP LE+    +    LD ++ +CD++ ++ PLT      T  +FDK R+  + +   ++N  RG ++D +A+++            DVW  +P P
Sbjct:   89 PGCNAVAVGEYAFNAMLELARRFHNPLKGKTVGIVGAGNTGTALQKCLEAYGVKTLLN-----DPLLEQSGDEREFVSLDELIERCDVISLHVPLTRDGEHPTHYLFDKRRLNALAEDTWLLNCCRGEVIDNRALIEVKQQRSDLKLVLDVWEGEPLP 241          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: PDXB_KLEP3 (Erythronate-4-phosphate dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=pdxB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.845e-11
Identity = 39/132 (29.55%), Postives = 68/132 (51.52%), Query Frame = 3
Query:  111 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE----KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP 494
            + L  +TVG VG G +G  L +RL+      L  D     P+ E+     F   LD ++ + D++  +TPL +    KT+ + D+  I+++K G +++N  RG ++D  A++    +G       DVW P+P
Sbjct:  112 FALRDRTVGIVGVGNVGGRLQKRLEALGIKTLLCD----PPRAERGDEGDFRS-LDALVQEADVLTFHTPLYKEGPYKTQHLADESLISRLKPGTILINACRGPVVDNAALLKRLEAGQPLSVVLDVWEPEP 238          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: PDXB_AZOVD (Erythronate-4-phosphate dehydrogenase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=pdxB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.845e-11
Identity = 41/131 (31.30%), Postives = 73/131 (55.73%), Query Frame = 3
Query:  114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEK----TRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP 494
            DL  +  G VG G++G  L++ L+     +L  D     P+   E G     DL T+L +CD++ V+TPLT +    TR +F ++++A+++ G  ++N +RGA++D +A+ +A +         DVW  +P
Sbjct:  113 DLASRCYGVVGAGQVGGRLVEVLRGLGWRVLVCD----PPRQALERGDFV--DLPTLLRECDVLSVHTPLTHEGAHPTRHLFGREQLARLRPGTWLINASRGAVVDNRALREALAGRTDLQAVLDVWEGEP 237          
The following BLAST results are available for this feature:
BLAST of EY675621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
LDHD_STRP14.419e-1129.23D-lactate dehydrogenase OS=Streptococcus pyogenes ... [more]
CTBP2_RAT4.419e-1128.39C-terminal-binding protein 2 OS=Rattus norvegicus ... [more]
CTBP2_MOUSE4.419e-1128.39C-terminal-binding protein 2 OS=Mus musculus GN=Ct... [more]
CTBP2_HUMAN4.419e-1128.39C-terminal-binding protein 2 OS=Homo sapiens GN=CT... [more]
PDXB_BACFR5.772e-1130.60Erythronate-4-phosphate dehydrogenase OS=Bacteroid... [more]
PDXB_BACFN5.772e-1130.60Erythronate-4-phosphate dehydrogenase OS=Bacteroid... [more]
CTBP2_BOVIN5.772e-1129.03C-terminal-binding protein 2 OS=Bos taurus GN=CTBP... [more]
PDXB_SHELP7.538e-1129.11Erythronate-4-phosphate dehydrogenase OS=Shewanell... [more]
PDXB_KLEP39.845e-1129.55Erythronate-4-phosphate dehydrogenase OS=Klebsiell... [more]
PDXB_AZOVD9.845e-1131.30Erythronate-4-phosphate dehydrogenase OS=Azotobact... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-A08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675621 ID=EY675621; Name=EY675621; organism=Citrus sinensis; type=EST; length=906bp
CCACGCGTCCGGAGCTTATGAGAATCCTCCTTCTTGTCCGTAATTTCTTA
CCTGGACACCATCAAGTTACCAGTGGGGAATGGAATGTTGCAGGTGTTGC
TTATAGAGCTTATGATCTTGAAGGAAAGACAGTGGGAACTGTTGGTTGTG
GACGCATTGGCAAGCTGTTGCTCCAACGACTTAAACCTTTCAATTGTAAT
CTCCTTTATCATGACCGGGTGAAGATGGATCCTCAATTGGAGAAAGAGAC
TGGAGCAAAATTTGAGGAGGATCTAGATACTATGCTTCCCAAATGTGACA
TAGTTGTTGTCAACACCCCTCTAACAGAAAAGACGAGAGGGATGTTTGAC
AAAGATAGGATTGCAAAGATGAAGAAGGGCGTCTTGATTGTCAACAATGC
TCGAGGAGCAATCATGGACACACAAGCTGTTGTTGACGCTTGCTCTAGTG
GACACCTTGCAGGTTATAGTGGTGATGTTTGGAATCCACAACCAGCTCCA
AAGGACCATCCCTGGCGTTACATGCCCAATCCAGGCAATGACCCCTCTTG
TTTCTGGGACCACTTTTATTCCCACCTACGCTATGGCTGCGGGGAATCAA
GGAATATCCTTGGACAGAAACCTCANGGGGAAAAAAAATTTCCTGGTTCA
AATTTACATATTGGAGGGCGGGGGAAACTGGGCCCCCCAATATCAAAAAA
TTTACAATTGTGGAAAAAACGAGTGTGTTGGGAATTAATTCTCCATGTTA
AAACAGGGAACTTTCAGAAATATAAGGGTCCACTGTTTTTTGGTACCCTT
CCGGGCCCTTAGGGGGAAAAAACGTTTATGATAAATTTTGTTGAAATCCA
CCCACTATTAAAACAAAGGGGAAATAATAGAAAACCCCCCACGAAAAAAG
GGAAAA
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