EY675621

Overview
NameEY675621
Unique NameEY675621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_SALNS (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella newport (strain SL254) GN=ghrB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.732e-18
Identity = 59/171 (34.50%), Postives = 88/171 (51.46%), Query Frame = 3 
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +GEW  + G A+   D+  KT+G VG GRIG  L QR    F   +LYH R +   + E    A++  DLDT+L + D V V  PLT +TR +F   + A+MK   + +N  RG ++D  A++ A  +G +     DV+  +P   D P   M N
Sbjct:  111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSN 279
[Close]
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_SALHS (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella heidelberg (strain SL476) GN=ghrB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.732e-18
Identity = 59/171 (34.50%), Postives = 88/171 (51.46%), Query Frame = 3 
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +GEW  + G A+   D+  KT+G VG GRIG  L QR    F   +LYH R +   + E    A++  DLDT+L + D V V  PLT +TR +F   + A+MK   + +N  RG ++D  A++ A  +G +     DV+  +P   D P   M N
Sbjct:  111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSN 279
[Close]
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_SALEP (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella enteritidis PT4 (strain P125109) GN=ghrB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.732e-18
Identity = 59/171 (34.50%), Postives = 88/171 (51.46%), Query Frame = 3 
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +GEW  + G A+   D+  KT+G VG GRIG  L QR    F   +LYH R +   + E    A++  DLDT+L + D V V  PLT +TR +F   + A+MK   + +N  RG ++D  A++ A  +G +     DV+  +P   D P   M N
Sbjct:  111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSN 279
[Close]
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_SALDC (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella dublin (strain CT_02021853) GN=ghrB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.732e-18
Identity = 59/171 (34.50%), Postives = 88/171 (51.46%), Query Frame = 3 
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +GEW  + G A+   D+  KT+G VG GRIG  L QR    F   +LYH R +   + E    A++  DLDT+L + D V V  PLT +TR +F   + A+MK   + +N  RG ++D  A++ A  +G +     DV+  +P   D P   M N
Sbjct:  111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSN 279
[Close]
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_SALCH (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella choleraesuis GN=ghrB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.732e-18
Identity = 59/171 (34.50%), Postives = 88/171 (51.46%), Query Frame = 3 
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +GEW  + G A+   D+  KT+G VG GRIG  L QR    F   +LYH R +   + E    A++  DLDT+L + D V V  PLT +TR +F   + A+MK   + +N  RG ++D  A++ A  +G +     DV+  +P   D P   M N
Sbjct:  111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSN 279
[Close]
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_SALA4 (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella agona (strain SL483) GN=ghrB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.732e-18
Identity = 59/171 (34.50%), Postives = 88/171 (51.46%), Query Frame = 3 
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +GEW  + G A+   D+  KT+G VG GRIG  L QR    F   +LYH R +   + E    A++  DLDT+L + D V V  PLT +TR +F   + A+MK   + +N  RG ++D  A++ A  +G +     DV+  +P   D P   M N
Sbjct:  111 MLTTARRVVDVAERVKAGEWTESIGPAWFGIDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSN 279
[Close]
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_SHIFL (Glyoxylate/hydroxypyruvate reductase B OS=Shigella flexneri GN=ghrB PE=3 SV=4)

HSP 1 Score: 92.0485 bits (227), Expect = 4.875e-18
Identity = 57/171 (33.33%), Postives = 90/171 (52.63%), Query Frame = 3 
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +GEW  + G  +   D+  KT+G VG GRIG  L QR+   FN  +LY+ R +   + E+   A++  DLDT+L + D V +  PLT++T  +F  ++ AKMK   + +N  RG ++D  A++ A   G +     DV+  +P   D P   M N
Sbjct:  111 VLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRVHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMAN 279
[Close]
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_SALPK (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella paratyphi A (strain AKU_12601) GN=ghrB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.875e-18
Identity = 59/171 (34.50%), Postives = 88/171 (51.46%), Query Frame = 3 
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +GEW  + G A+   D+  KT+G VG GRIG  L QR    F   +LYH R +   + E    A++  DLDT+L + D V V  PLT +TR +F   + A+MK   + +N  RG ++D  A++ A  +G +     DV+  +P   D P   M N
Sbjct:  111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTTETRHLFGTTQFARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEHEPLSVDSPLLNMSN 279
[Close]
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_SALPB (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=ghrB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.875e-18
Identity = 59/171 (34.50%), Postives = 88/171 (51.46%), Query Frame = 3 
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +GEW  + G A+   D+  KT+G VG GRIG  L QR    F   +LYH R +   + E    A++  DLDT+L + D V V  PLT +TR +F   + A+MK   + +N  RG ++D  A++ A  +G +     DV+  +P   D P   M N
Sbjct:  111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTTETRHLFGTTQFARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEHEPLSVDSPLLNMSN 279
[Close]
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_SALPA (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella paratyphi A GN=ghrB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.875e-18
Identity = 59/171 (34.50%), Postives = 88/171 (51.46%), Query Frame = 3 
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +GEW  + G A+   D+  KT+G VG GRIG  L QR    F   +LYH R +   + E    A++  DLDT+L + D V V  PLT +TR +F   + A+MK   + +N  RG ++D  A++ A  +G +     DV+  +P   D P   M N
Sbjct:  111 MLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTTETRHLFGTTQFARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEHEPLSVDSPLLNMSN 279
The following BLAST results are available for this feature:
BLAST of EY675621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
GHRB_SALNS3.732e-1834.50Glyoxylate/hydroxypyruvate reductase B OS=Salmonel... [more]
GHRB_SALHS3.732e-1834.50Glyoxylate/hydroxypyruvate reductase B OS=Salmonel... [more]
GHRB_SALEP3.732e-1834.50Glyoxylate/hydroxypyruvate reductase B OS=Salmonel... [more]
GHRB_SALDC3.732e-1834.50Glyoxylate/hydroxypyruvate reductase B OS=Salmonel... [more]
GHRB_SALCH3.732e-1834.50Glyoxylate/hydroxypyruvate reductase B OS=Salmonel... [more]
GHRB_SALA43.732e-1834.50Glyoxylate/hydroxypyruvate reductase B OS=Salmonel... [more]
GHRB_SHIFL4.875e-1833.33Glyoxylate/hydroxypyruvate reductase B OS=Shigella... [more]
GHRB_SALPK4.875e-1834.50Glyoxylate/hydroxypyruvate reductase B OS=Salmonel... [more]
GHRB_SALPB4.875e-1834.50Glyoxylate/hydroxypyruvate reductase B OS=Salmonel... [more]
GHRB_SALPA4.875e-1834.50Glyoxylate/hydroxypyruvate reductase B OS=Salmonel... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-A08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675621 ID=EY675621; Name=EY675621; organism=Citrus sinensis; type=EST; length=906bp
CCACGCGTCCGGAGCTTATGAGAATCCTCCTTCTTGTCCGTAATTTCTTA
CCTGGACACCATCAAGTTACCAGTGGGGAATGGAATGTTGCAGGTGTTGC
TTATAGAGCTTATGATCTTGAAGGAAAGACAGTGGGAACTGTTGGTTGTG
GACGCATTGGCAAGCTGTTGCTCCAACGACTTAAACCTTTCAATTGTAAT
CTCCTTTATCATGACCGGGTGAAGATGGATCCTCAATTGGAGAAAGAGAC
TGGAGCAAAATTTGAGGAGGATCTAGATACTATGCTTCCCAAATGTGACA
TAGTTGTTGTCAACACCCCTCTAACAGAAAAGACGAGAGGGATGTTTGAC
AAAGATAGGATTGCAAAGATGAAGAAGGGCGTCTTGATTGTCAACAATGC
TCGAGGAGCAATCATGGACACACAAGCTGTTGTTGACGCTTGCTCTAGTG
GACACCTTGCAGGTTATAGTGGTGATGTTTGGAATCCACAACCAGCTCCA
AAGGACCATCCCTGGCGTTACATGCCCAATCCAGGCAATGACCCCTCTTG
TTTCTGGGACCACTTTTATTCCCACCTACGCTATGGCTGCGGGGAATCAA
GGAATATCCTTGGACAGAAACCTCANGGGGAAAAAAAATTTCCTGGTTCA
AATTTACATATTGGAGGGCGGGGGAAACTGGGCCCCCCAATATCAAAAAA
TTTACAATTGTGGAAAAAACGAGTGTGTTGGGAATTAATTCTCCATGTTA
AAACAGGGAACTTTCAGAAATATAAGGGTCCACTGTTTTTTGGTACCCTT
CCGGGCCCTTAGGGGGAAAAAACGTTTATGATAAATTTTGTTGAAATCCA
CCCACTATTAAAACAAAGGGGAAATAATAGAAAACCCCCCACGAAAAAAG
GGAAAA
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