EY675621

Overview
NameEY675621
Unique NameEY675621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_YERE8 (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ghrB PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.419e-17
Identity = 56/171 (32.75%), Postives = 90/171 (52.63%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +GEW  + G  +   D+  KT+G +G GRIG  L QR    F+  +LY  R +     EK  GA+    LDT+L + D + +  P+TE+T  M   +++AKMK   +++N  RG ++D QA++ A   G +     DV+  +P P + P   +PN
Sbjct:  111 VLSSARRVVELAERVKAGEWQDSIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSR-RPHEAAEKRFGAR-RCSLDTLLAEVDFLCITLPMTEQTYHMIGPEQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFAQEPLPVESPLLKLPN 279          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_SHIDS (Glyoxylate/hydroxypyruvate reductase B OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ghrB PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.419e-17
Identity = 57/171 (33.33%), Postives = 89/171 (52.05%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +GEW  + G  +   D+  KT+G VG GRIG  L QR    FN  +LY+ R +   + E+   A++  DLDT+L + D V +  PLT++T  +F  ++ AKMK   + +N  RG ++D  A++ A   G +     DV+  +P   D P   M N
Sbjct:  111 VLSTARRVVEVAERVKAGEWTASIGPDWYGTDVYHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETYHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMAN 279          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: SERA_MYCLE (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium leprae GN=serA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.160e-17
Identity = 48/132 (36.36%), Postives = 77/132 (58.33%), Query Frame = 3
Query:   99 AYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQP 494
            ++   ++ GKTVG VG GRIG+L+  R+  F  +++ +D   + P    + G +     D +L + D + V+ P T +T G+ DK+ +AK K GV+IVN ARG ++D  A+ DA  SGH+     DV+  +P
Sbjct:  133 SFSGTEIFGKTVGVVGLGRIGQLVAARIAAFGAHVIAYDPY-VAPARAAQLGIELMS-FDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEVALADAVRSGHVRAAGLDVFATEP 262          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_ECOL6 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O6 GN=ghrB PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.160e-17
Identity = 56/171 (32.75%), Postives = 89/171 (52.05%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +GEW  + G  +   D+  KT+G VG GRIG  L QR    FN  +LY+ R +   + E+   A++  +LDT+L + D V +  PLT++T  +F  ++ AKMK   + +N  RG ++D  A++ A   G +     DV+  +P   D P   M N
Sbjct:  111 VLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-NLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMAN 279          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: SERA_RAT (D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus GN=Phgdh PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 4.127e-17
Identity = 52/161 (32.30%), Postives = 88/161 (54.66%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKD 506
            ++ L R        +  G+W+     +   +L GKT+G +G GRIG+ +  R++ F    + +D + + P++    G + +  L+ + P CD + V+TPL   T G+ +    A+ KKGV +VN ARG I+D  A++ A  SG  AG + DV+  +P P+D
Sbjct:  114 LMCLARQIPQATASMKDGKWDRK--KFMGTELNGKTLGILGLGRIGREVAARMQAFGMKTVGYDPI-ISPEVAASFGVQ-QLPLEEIWPLCDFITVHTPLLPSTTGLLNDSTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRD 269          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_ECOL5 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ghrB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.127e-17
Identity = 56/171 (32.75%), Postives = 88/171 (51.46%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +GEW  + G  +   D+  KT+G VG GRIG  L QR    FN  +LY+ R +   + E+   A++  DLDT+L + D V +  PLT++T  +F  ++  KMK   + +N  RG ++D  A++ A   G +     DV+  +P   D P   M N
Sbjct:  111 VLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETYHLFGAEQFGKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMAN 279          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_YERPS (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis GN=ghrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.390e-17
Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = 3
Query:   63 QVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHP 512
            +V +GEW  + G  +   D+  KT+G +G GRIG  L QR    F+  +LY  R +     E+  GA+    LDT+L + D + +  P+TE+T  M  ++++AKMK   +++N  RG ++D QA++ A   G +     DV+  +P P D P
Sbjct:  124 RVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSR-RPHEAAEQRFGAR-HCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSP 273          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_YERPP (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis (strain Pestoides F) GN=ghrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.390e-17
Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = 3
Query:   63 QVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHP 512
            +V +GEW  + G  +   D+  KT+G +G GRIG  L QR    F+  +LY  R +     E+  GA+    LDT+L + D + +  P+TE+T  M  ++++AKMK   +++N  RG ++D QA++ A   G +     DV+  +P P D P
Sbjct:  124 RVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSR-RPHEAAEQRFGAR-HCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSP 273          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_YERPG (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Angola) GN=ghrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.390e-17
Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = 3
Query:   63 QVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHP 512
            +V +GEW  + G  +   D+  KT+G +G GRIG  L QR    F+  +LY  R +     E+  GA+    LDT+L + D + +  P+TE+T  M  ++++AKMK   +++N  RG ++D QA++ A   G +     DV+  +P P D P
Sbjct:  124 RVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSR-RPHEAAEQRFGAR-HCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSP 273          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_YERPE (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis GN=ghrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.390e-17
Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = 3
Query:   63 QVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHP 512
            +V +GEW  + G  +   D+  KT+G +G GRIG  L QR    F+  +LY  R +     E+  GA+    LDT+L + D + +  P+TE+T  M  ++++AKMK   +++N  RG ++D QA++ A   G +     DV+  +P P D P
Sbjct:  124 RVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSR-RPHEAAEQRFGAR-HCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSP 273          
The following BLAST results are available for this feature:
BLAST of EY675621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
GHRB_YERE82.419e-1732.75Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_SHIDS2.419e-1733.33Glyoxylate/hydroxypyruvate reductase B OS=Shigella... [more]
SERA_MYCLE3.160e-1736.36D-3-phosphoglycerate dehydrogenase OS=Mycobacteriu... [more]
GHRB_ECOL63.160e-1732.75Glyoxylate/hydroxypyruvate reductase B OS=Escheric... [more]
SERA_RAT4.127e-1732.30D-3-phosphoglycerate dehydrogenase OS=Rattus norve... [more]
GHRB_ECOL54.127e-1732.75Glyoxylate/hydroxypyruvate reductase B OS=Escheric... [more]
GHRB_YERPS5.390e-1734.21Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPP5.390e-1734.21Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPG5.390e-1734.21Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPE5.390e-1734.21Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-A08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675621 ID=EY675621; Name=EY675621; organism=Citrus sinensis; type=EST; length=906bp
CCACGCGTCCGGAGCTTATGAGAATCCTCCTTCTTGTCCGTAATTTCTTA
CCTGGACACCATCAAGTTACCAGTGGGGAATGGAATGTTGCAGGTGTTGC
TTATAGAGCTTATGATCTTGAAGGAAAGACAGTGGGAACTGTTGGTTGTG
GACGCATTGGCAAGCTGTTGCTCCAACGACTTAAACCTTTCAATTGTAAT
CTCCTTTATCATGACCGGGTGAAGATGGATCCTCAATTGGAGAAAGAGAC
TGGAGCAAAATTTGAGGAGGATCTAGATACTATGCTTCCCAAATGTGACA
TAGTTGTTGTCAACACCCCTCTAACAGAAAAGACGAGAGGGATGTTTGAC
AAAGATAGGATTGCAAAGATGAAGAAGGGCGTCTTGATTGTCAACAATGC
TCGAGGAGCAATCATGGACACACAAGCTGTTGTTGACGCTTGCTCTAGTG
GACACCTTGCAGGTTATAGTGGTGATGTTTGGAATCCACAACCAGCTCCA
AAGGACCATCCCTGGCGTTACATGCCCAATCCAGGCAATGACCCCTCTTG
TTTCTGGGACCACTTTTATTCCCACCTACGCTATGGCTGCGGGGAATCAA
GGAATATCCTTGGACAGAAACCTCANGGGGAAAAAAAATTTCCTGGTTCA
AATTTACATATTGGAGGGCGGGGGAAACTGGGCCCCCCAATATCAAAAAA
TTTACAATTGTGGAAAAAACGAGTGTGTTGGGAATTAATTCTCCATGTTA
AAACAGGGAACTTTCAGAAATATAAGGGTCCACTGTTTTTTGGTACCCTT
CCGGGCCCTTAGGGGGAAAAAACGTTTATGATAAATTTTGTTGAAATCCA
CCCACTATTAAAACAAAGGGGAAATAATAGAAAACCCCCCACGAAAAAAG
GGAAAA
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