EY675621

Overview
NameEY675621
Unique NameEY675621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_YERPB (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ghrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.390e-17
Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = 3
Query:   63 QVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHP 512
            +V +GEW  + G  +   D+  KT+G +G GRIG  L QR    F+  +LY  R +     E+  GA+    LDT+L + D + +  P+TE+T  M  ++++AKMK   +++N  RG ++D QA++ A   G +     DV+  +P P D P
Sbjct:  124 RVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSR-RPHEAAEQRFGAR-HCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSP 273          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_YERPA (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=ghrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.390e-17
Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = 3
Query:   63 QVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHP 512
            +V +GEW  + G  +   D+  KT+G +G GRIG  L QR    F+  +LY  R +     E+  GA+    LDT+L + D + +  P+TE+T  M  ++++AKMK   +++N  RG ++D QA++ A   G +     DV+  +P P D P
Sbjct:  124 RVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSR-RPHEAAEQRFGAR-HCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSP 273          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_YERP3 (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=ghrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.390e-17
Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = 3
Query:   63 QVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHP 512
            +V +GEW  + G  +   D+  KT+G +G GRIG  L QR    F+  +LY  R +     E+  GA+    LDT+L + D + +  P+TE+T  M  ++++AKMK   +++N  RG ++D QA++ A   G +     DV+  +P P D P
Sbjct:  124 RVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSR-RPHEAAEQRFGAR-HCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSP 273          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_ECOHS (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O9:H4 (strain HS) GN=ghrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.390e-17
Identity = 56/171 (32.75%), Postives = 88/171 (51.46%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +G W  + G  +   D+  KT+G VG GRIG  L QR    FN  +LY+ R +   + E+   A++  DLDT+L + D V +  PLT++T  +F  ++ AKMK   + +N  RG ++D  A++ A   G +     DV+  +P   D P   M N
Sbjct:  111 VLSTARRVVEVAERVKAGGWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMAN 279          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_PECCP (Glyoxylate/hydroxypyruvate reductase B OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=ghrB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.039e-17
Identity = 57/175 (32.57%), Postives = 94/175 (53.71%), Query Frame = 3
Query:   15 LMRILLLVRNFLPGHHQVTSGEWNVAGVA--YRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            L  +L   R  +    +V +GEW   GV   +   D+  KT+G +G GRIG  + QR    F+  +LY+ R +   + E+   A+   DLDT+L + D + +  PLT +T  +  ++++AKMK   +++N  RGA++D  A+ +A   G + G   DV+  +P P D P   +PN
Sbjct:  104 LALMLASARRVVEVAERVKAGEWK-GGVDSDWFGTDVHHKTIGILGMGRIGLAVAQRAHFGFSMPVLYNAR-RHHAEAEQRFNAR-HCDLDTLLAESDFLCITLPLTTETHHLIGREQLAKMKPSAILINIGRGAVVDEDALTEALVKGTIQGAGLDVFVKEPLPVDSPLLDLPN 275          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_ECOLU (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ghrB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.201e-16
Identity = 55/171 (32.16%), Postives = 88/171 (51.46%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            +L   R  +    +V +GEW  + G  +   D+  KT+G VG GRIG  L QR    FN  +LY+ R +   + E+   A++  DLD++L + D V +  PLT++T  +F  ++  KMK   + +N  RG ++D  A++ A   G +     DV+  +P   D P   M N
Sbjct:  111 VLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDSLLQESDFVCLILPLTDETYHLFGAEQFGKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMAN 279          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: TKRA_BACSU (Probable 2-ketogluconate reductase OS=Bacillus subtilis GN=yvcT PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.568e-16
Identity = 52/157 (33.12%), Postives = 86/157 (54.78%), Query Frame = 3
Query:   66 VTSGEWN-VAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHPWRYMPN 530
            V +G+W  V   A    D+  +T+G +G GRIG+   +R K  F+  +LYH+R +   + E   G K+ E LDT+L + D +++ TPLT++T  M  +     MK   + VN +RG  +D +A++ A   G + G   DV+  +P  +D+P   + N
Sbjct:  128 VRAGKWGTVEEEALFGIDVHHQTLGIIGMGRIGEQAARRAKFGFDMEVLYHNRHRKQ-ETEDSIGVKYAE-LDTLLEQSDFILLITPLTDETYHMIGEREFKLMKNSAIFVNISRGKTVDEKALIRALQEGWIRGAGLDVYEKEPVTQDNPLLQLDN 282          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: SERA_PIG (D-3-phosphoglycerate dehydrogenase OS=Sus scrofa GN=PHGDH PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.568e-16
Identity = 53/161 (32.92%), Postives = 85/161 (52.80%), Query Frame = 3
Query:   24 ILLLVRNFLPGHHQVTSGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKD 506
            IL L R        +  G+W      +   +L GK +G +G GRIG+ +  R++ F    + +D + + P++    G + +  L+ + P CD + V+TPL   T G+ +    A  KKGV +VN ARG I+D  A++ A  SG  AG + DV+  +P P+D
Sbjct:  114 ILCLARQIPQATASMKDGKWERK--KFMGTELNGKVLGILGLGRIGREVATRMQSFGMKTIGYDPI-IAPEVSASFGVQ-QLPLEEIWPLCDFITVHTPLLPSTTGLLNDSTFALCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRD 269          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_YERPY (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=ghrB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.568e-16
Identity = 51/152 (33.55%), Postives = 84/152 (55.26%), Query Frame = 3
Query:   63 QVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHP 512
            +V +GEW  + G  +   D+  KT+G +G GRIG  L QR    F+  +LY  R +     E+  GA+    LDT+L + D + +  P+TE+T  M  ++++AK+K   +++N  RG ++D QA++ A   G +     DV+  +P P D P
Sbjct:  124 RVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSR-RPHEAAEQRFGAR-HCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKIKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSP 273          
BLAST of EY675621 vs. ExPASy Swiss-Prot
Match: GHRB_YERPN (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=ghrB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.568e-16
Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = 3
Query:   63 QVTSGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHLAGYSGDVWNPQPAPKDHP 512
            +V +GEW  + G  +   D+  KT+G +G GRIG  L QR    F+  +LY  R +     E+  GA+    LDT+L + D + +  P+TE+T  M  ++++AKMK   +++N  RG ++D Q ++ A   G +     DV+  +P P D P
Sbjct:  124 RVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSR-RPHEAAEQRFGAR-HCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQTLIAALQDGTIHAAGLDVFEQEPLPVDSP 273          
The following BLAST results are available for this feature:
BLAST of EY675621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
GHRB_YERPB5.390e-1734.21Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPA5.390e-1734.21Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERP35.390e-1734.21Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_ECOHS5.390e-1732.75Glyoxylate/hydroxypyruvate reductase B OS=Escheric... [more]
GHRB_PECCP7.039e-1732.57Glyoxylate/hydroxypyruvate reductase B OS=Pectobac... [more]
GHRB_ECOLU1.201e-1632.16Glyoxylate/hydroxypyruvate reductase B OS=Escheric... [more]
TKRA_BACSU1.568e-1633.12Probable 2-ketogluconate reductase OS=Bacillus sub... [more]
SERA_PIG1.568e-1632.92D-3-phosphoglycerate dehydrogenase OS=Sus scrofa G... [more]
GHRB_YERPY1.568e-1633.55Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPN1.568e-1633.55Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-A08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675621 ID=EY675621; Name=EY675621; organism=Citrus sinensis; type=EST; length=906bp
CCACGCGTCCGGAGCTTATGAGAATCCTCCTTCTTGTCCGTAATTTCTTA
CCTGGACACCATCAAGTTACCAGTGGGGAATGGAATGTTGCAGGTGTTGC
TTATAGAGCTTATGATCTTGAAGGAAAGACAGTGGGAACTGTTGGTTGTG
GACGCATTGGCAAGCTGTTGCTCCAACGACTTAAACCTTTCAATTGTAAT
CTCCTTTATCATGACCGGGTGAAGATGGATCCTCAATTGGAGAAAGAGAC
TGGAGCAAAATTTGAGGAGGATCTAGATACTATGCTTCCCAAATGTGACA
TAGTTGTTGTCAACACCCCTCTAACAGAAAAGACGAGAGGGATGTTTGAC
AAAGATAGGATTGCAAAGATGAAGAAGGGCGTCTTGATTGTCAACAATGC
TCGAGGAGCAATCATGGACACACAAGCTGTTGTTGACGCTTGCTCTAGTG
GACACCTTGCAGGTTATAGTGGTGATGTTTGGAATCCACAACCAGCTCCA
AAGGACCATCCCTGGCGTTACATGCCCAATCCAGGCAATGACCCCTCTTG
TTTCTGGGACCACTTTTATTCCCACCTACGCTATGGCTGCGGGGAATCAA
GGAATATCCTTGGACAGAAACCTCANGGGGAAAAAAAATTTCCTGGTTCA
AATTTACATATTGGAGGGCGGGGGAAACTGGGCCCCCCAATATCAAAAAA
TTTACAATTGTGGAAAAAACGAGTGTGTTGGGAATTAATTCTCCATGTTA
AAACAGGGAACTTTCAGAAATATAAGGGTCCACTGTTTTTTGGTACCCTT
CCGGGCCCTTAGGGGGAAAAAACGTTTATGATAAATTTTGTTGAAATCCA
CCCACTATTAAAACAAAGGGGAAATAATAGAAAACCCCCCACGAAAAAAG
GGAAAA
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