EY675617

Overview
NameEY675617
Unique NameEY675617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length948
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARL6_BOVIN (ADP-ribosylation factor-like protein 6 OS=Bos taurus GN=ARL6 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.844e-24
Identity = 56/139 (40.29%), Postives = 92/139 (66.19%), Query Frame = 2
Query:   59 EMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQR 463
            E+ +L +GLD +GKTTI+ KLK     +   +PTIGF+++  +  ++SFTV+D+ GQ + R LW HY++  Q +IFV+DS+D+ R+V A++EL  +LN  ++  R   +L FANK DL  A+ + K++  L L  ++ +
Sbjct:   17 EVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIQKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDKLRMVVAKEELRTLLNHPDIKHRRIPILFFANKMDLRDALTSVKVSQLLCLEDIKDK 155          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARL3_PONAB (ADP-ribosylation factor-like protein 3 OS=Pongo abelii GN=ARL3 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.851e-24
Identity = 61/144 (42.36%), Postives = 87/144 (60.42%), Query Frame = 2
Query:   59 EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQRHGYLQSTCA 490
            E+RIL++GLD AGKTT+L +L   +I    PT GFN+++V+ +     VWD+GGQ KIRP W++YF+NT  L                 EL  +L E++L    +L+FANKQDL  A  A++I + L LH++R R   +QS  A
Sbjct:   17 EVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDIL-----------------ELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSA 143          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARL17_HUMAN (ADP-ribosylation factor-like protein 17 OS=Homo sapiens GN=ARL17 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.851e-24
Identity = 51/71 (71.83%), Postives = 60/71 (84.51%), Query Frame = 2
Query:   59 EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQG 271
            +MRIL++ LD AGKTTILYKLKLGE V  +PT+GF VETVEYKN +F VWDVG   KIRPLW+H+FQNT+G
Sbjct:   17 KMRILILSLDTAGKTTILYKLKLGETVPAVPTVGFCVETVEYKNNTFAVWDVGSHFKIRPLWQHFFQNTKG 87          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: AR8BA_DANRE (ADP-ribosylation factor-like protein 8B-A OS=Danio rerio GN=arl8ba PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.851e-24
Identity = 49/140 (35.00%), Postives = 89/140 (63.57%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQR 463
            F   EM + +VGL  +GKTT +  +  G+     IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    ++++VD+ DR++V  +R+ELH +L++ +L+   +LV  NK+DLP A++  ++ +K+ L +++ R
Sbjct:   16 FWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMVDAADREKVEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLAAIQDR 155          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARL8B_RAT (ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.336e-24
Identity = 47/140 (33.57%), Postives = 89/140 (63.57%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQR 463
            F   EM + +VGL  +GKTT +  +  G+     IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++++D+ DR+++  +R+ELH +L++ +L+   +LV  NK+DLP A++  ++ +K+ L +++ R
Sbjct:   16 FWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDR 155          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARL8B_MOUSE (ADP-ribosylation factor-like protein 8B OS=Mus musculus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.336e-24
Identity = 47/140 (33.57%), Postives = 89/140 (63.57%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQR 463
            F   EM + +VGL  +GKTT +  +  G+     IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++++D+ DR+++  +R+ELH +L++ +L+   +LV  NK+DLP A++  ++ +K+ L +++ R
Sbjct:   16 FWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDR 155          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARL8B_HUMAN (ADP-ribosylation factor-like protein 8B OS=Homo sapiens GN=ARL8B PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.336e-24
Identity = 47/140 (33.57%), Postives = 89/140 (63.57%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQR 463
            F   EM + +VGL  +GKTT +  +  G+     IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++++D+ DR+++  +R+ELH +L++ +L+   +LV  NK+DLP A++  ++ +K+ L +++ R
Sbjct:   16 FWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDR 155          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARL8B_MACFA (ADP-ribosylation factor-like protein 8B OS=Macaca fascicularis GN=ARL8B PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 8.275e-24
Identity = 47/140 (33.57%), Postives = 89/140 (63.57%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQR 463
            F   EM + +VGL  +GKTT +  +  G+     IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++++D+ DR+++  +R+ELH +L++ +L+   +LV  NK+DLP A++  ++ +K+ L +++ R
Sbjct:   16 FWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRYRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDR 155          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARL8_DROME (ADP-ribosylation factor-like protein 8 OS=Drosophila melanogaster GN=Gie PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.843e-23
Identity = 51/148 (34.46%), Postives = 89/148 (60.14%), Query Frame = 2
Query:   23 IYEAF*PAFCHPEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQR 463
            I E F   F   EM + +VGL  +GKTT +  +  G+     IPT+GFN+  +   N++  VWD+GGQ + R +W  Y +    ++++VD+ D D++  +R+ELH +L++ +L    +LV  NK+DLP A++   + +++ L S++ R
Sbjct:    8 ILEWFKSIFWKEEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKITRGNVTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDLPGALDETGLIERMNLSSIQDR 155          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARL8B_BOVIN (ADP-ribosylation factor-like protein 8B OS=Bos taurus GN=ARL8B PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.843e-23
Identity = 46/140 (32.86%), Postives = 89/140 (63.57%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQR 463
            F   EM + +VGL  +GKTT +  +  G+     IPT+GFN+  V   N++  +WD+GGQ + + +W  Y +    +++++D+ DR+++  +R+ELH +L++ +L+   +LV  NK+DLP A++  ++ +K+ L +++ R
Sbjct:   16 FWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFQSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDR 155          
The following BLAST results are available for this feature:
BLAST of EY675617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARL6_BOVIN2.844e-2440.29ADP-ribosylation factor-like protein 6 OS=Bos taur... [more]
ARL3_PONAB4.851e-2442.36ADP-ribosylation factor-like protein 3 OS=Pongo ab... [more]
ARL17_HUMAN4.851e-2471.83ADP-ribosylation factor-like protein 17 OS=Homo sa... [more]
AR8BA_DANRE4.851e-2435.00ADP-ribosylation factor-like protein 8B-A OS=Danio... [more]
ARL8B_RAT6.336e-2433.57ADP-ribosylation factor-like protein 8B OS=Rattus ... [more]
ARL8B_MOUSE6.336e-2433.57ADP-ribosylation factor-like protein 8B OS=Mus mus... [more]
ARL8B_HUMAN6.336e-2433.57ADP-ribosylation factor-like protein 8B OS=Homo sa... [more]
ARL8B_MACFA8.275e-2433.57ADP-ribosylation factor-like protein 8B OS=Macaca ... [more]
ARL8_DROME1.843e-2334.46ADP-ribosylation factor-like protein 8 OS=Drosophi... [more]
ARL8B_BOVIN1.843e-2332.86ADP-ribosylation factor-like protein 8B OS=Bos tau... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-A03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675617 ID=EY675617; Name=EY675617; organism=Citrus sinensis; type=EST; length=948bp
GATAACAGAAAATGCCGCTGTCATTTACGAAGCTTTTTAGCCGGCTTTTT
GCCACCCAGAGATGCGAATTCTGATGGTGGGTCTCGACGCTGCTGGTAAG
ACCACCATTTTGTACAAGCTCAAGCTCGGTGAGATTGTGACAACCATTCC
TACCATTGGTTTCAACGTGGAGACTGTGGAATATAAGAACATTAGCTTCA
CTGTTTGGGATGTTGGGGGTCAGGATAAGATTCGTCCTTTGTGGAGACAT
TACTTCCAAAACACTCAAGGACTTATCTTTGTGGTTGATAGCAATGATCG
TGACCGTGTGGTTGAAGCTAGAGATGAACTGCACCGGATGCTGAATGAGG
ATGAGTTGAGGGATGCTGTGCTGCTTGTTTTTGCCAACAAGCAAGATCTT
CCAAAGGCCATGAATGCTGCAAAGATCACTGATAAGCTTGGTCTTCACTC
CCTTCGTCAACGCCACGGGTACCTCCAGAGCACATGTGCCACATCTGGGG
AAGGGATCTAAGAAGGGTCTGGAACGGGTCCTCAAACAACATCCCAAAAC
AAAGGCTAATTTAATTGGTCCAAGTCTAAAACGAAATCTTTGCAGGCACA
TCCAAGGAGAAAGGAGGTTACTAGGCCTTTTGGTTTTTTTTGGGCGGGGG
ATTCTTTTTGGGGGTTTTAACAACCCAAAATCAAAAAAAATAGAAATTTG
GTATTGTGATAAAAAATTAAAATTATGGGACCCAAAAAAAAAAAAGTTTT
TTATCGCATAAAGCCTTTTGGAAAAGGATGAAAAATAACACCCCCAATTT
ATTTAGGAAATAATAAAGGGAGAATTTTATTGGGGCGAGTGAGTAATCCA
CCACTAAAAGTCATCACTCCATATAGTGACGGTGGAGAAGAGATGTGGCA
AAGAAAATATATTTTTATTATTAAACCCACCCAAAATAAGAAAATGAT
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