EY675617

Overview
NameEY675617
Unique NameEY675617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length948
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: SAR1_PICPG (Small COPII coat GTPase SAR1 OS=Pichia pastoris (strain GS115) GN=SAR1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.862e-18
Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 2
Query:   65 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGL 445
            ++L +GLD AGKTT+L+ LK   + T  PT     E +   N+ FT +D+GG ++ R +W+ YF    G++++VD  D +R  E+R EL  +L  +EL    +LV  NK D   A++  ++   LGL
Sbjct:   22 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELSIGNVRFTTFDLGGHEQARRVWKDYFPEVDGIVYLVDIADPERFEESRVELDALLKIEELSKVPVLVLGNKIDKSTAVSENELRHALGL 148          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: AR13B_MOUSE (ADP-ribosylation factor-like protein 13B OS=Mus musculus GN=Arl13b PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.157e-17
Identity = 45/136 (33.09%), Postives = 76/136 (55.88%), Query Frame = 2
Query:   59 EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQRH 466
            ++ ++MVGLD AGKT     ++        PT+GF+   +       T++D+GG  +IR +W++Y+  + G+IFVVDS+D +R+ E ++ +  +L    +    +LV ANKQD   A+  A + + L L  L   H
Sbjct:   21 KVTLVMVGLDNAGKTATAKGIQGEHPEDVAPTVGFSKIDLRQGKFQVTIFDLGGGKRIRGIWKNYYAESYGVIFVVDSSDEERMEETKETMSEVLRHPRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEH 156          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNG (Small COPII coat GTPase SAR1 OS=Aspergillus niger GN=sar1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.512e-17
Identity = 46/128 (35.94%), Postives = 72/128 (56.25%), Query Frame = 2
Query:   65 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLH 448
            ++L +GLD AGKTT+L+ LK   +    PT     E +   N  FT +D+GG  + R LW+ YF    G++F+VD+ D +   E++ EL  +L  +EL     L+  NK D P A++   +  +LGL+
Sbjct:   22 KLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHECFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDDVRHQLGLY 149          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.578e-17
Identity = 42/130 (32.31%), Postives = 77/130 (59.23%), Query Frame = 2
Query:   65 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSL 454
            +++ +GLD AGKTT+L+ LK   I   +PT+    E +    ISFT +D+GG  + R +W+ YF     ++F++D  D +R+ E+R EL  +L ++++    +L+  NK D P A++  ++  +L +  +
Sbjct:   23 KLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPGALSEDQLKWQLNIQHM 152          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: SAR1A_PONAB (GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.578e-17
Identity = 40/128 (31.25%), Postives = 79/128 (61.72%), Query Frame = 2
Query:   65 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLH 448
            +++ +GLD AGKTT+L+ LK   +   +PT+    E +    ++FT +D+GG ++ R +W++Y     G++F+VD  D  R+VE++ EL+ ++ ++ + +  +L+  NK D   A++  K+ +  GL+
Sbjct:   27 KLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLY 154          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: SAR1A_HUMAN (GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.578e-17
Identity = 40/128 (31.25%), Postives = 79/128 (61.72%), Query Frame = 2
Query:   65 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLH 448
            +++ +GLD AGKTT+L+ LK   +   +PT+    E +    ++FT +D+GG ++ R +W++Y     G++F+VD  D  R+VE++ EL+ ++ ++ + +  +L+  NK D   A++  K+ +  GL+
Sbjct:   27 KLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLY 154          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARL3_YEAST (ADP-ribosylation factor-like protein 3 OS=Saccharomyces cerevisiae GN=ARL3 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.578e-17
Identity = 51/130 (39.23%), Postives = 73/130 (56.15%), Query Frame = 2
Query:   68 ILMVGLDAAGKTTIL------YKLKLGEIVTTIPTIGFNVET--VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITD 433
            IL++GLD AGKTT L      Y L    +    PT+G NV T  V+ K I    WDVGGQ+ +R +W  Y+    G+IF+VDS+DR+R+ E    L  ++ ++E+    +L+ ANKQD    M    I +
Sbjct:   20 ILILGLDNAGKTTFLETLKKEYSLAFKALEKIQPTVGQNVATIPVDSKQI-LKFWDVGGQESLRSMWSEYYSLCHGIIFIVDSSDRERLDECSTTLQSVVMDEEIEGVPILMLANKQDRQDRMEVQDIKE 148          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARL10_HUMAN (ADP-ribosylation factor-like protein 10 OS=Homo sapiens GN=ARL10 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.578e-17
Identity = 57/148 (38.51%), Postives = 86/148 (58.11%), Query Frame = 2
Query:   41 PAFCHPEMR-ILMVGLDAAGKTTILYKLK-LGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSL-RQRHGYL 475
            PA    E R +L++GLD AGK+T L  L     +   IPT GFN   +  K+    + ++GG   +R  W+ +      L+FVVDS DR R+  AR ELH++L++D   D  ++V ANKQDL +AM+  ++  +LGL ++  QR  +L
Sbjct:   70 PALEELEQREVLVLGLDGAGKSTFLRVLSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWARQELHKLLDKDP--DLPVVVVANKQDLSEAMSMGELQRELGLQAIDNQREVFL 215          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.744e-17
Identity = 46/142 (32.39%), Postives = 77/142 (54.23%), Query Frame = 2
Query:   59 EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQRHGYLQST 484
            E +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W+ Y+     ++++VD+ D++R  E++ EL  +L+++ L     L+  NK D+P A +  ++   LGL +     G +  T
Sbjct:   20 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNLT 161          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: SAR1A_PIG (GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.502e-17
Identity = 39/128 (30.47%), Postives = 79/128 (61.72%), Query Frame = 2
Query:   65 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLH 448
            +++ +GLD AGKTT+L+ LK   +   +PT+    E +    ++FT +D+GG ++ R +W++Y     G++F+VD  D  R++E++ EL+ ++ ++ + +  +L+  NK D   A++  K+ +  GL+
Sbjct:   27 KLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLY 154          
The following BLAST results are available for this feature:
BLAST of EY675617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
SAR1_PICPG8.862e-1837.01Small COPII coat GTPase SAR1 OS=Pichia pastoris (s... [more]
AR13B_MOUSE1.157e-1733.09ADP-ribosylation factor-like protein 13B OS=Mus mu... [more]
SAR1_ASPNG1.512e-1735.94Small COPII coat GTPase SAR1 OS=Aspergillus niger ... [more]
SAR1_CAEEL2.578e-1732.31GTP-binding protein SAR1 OS=Caenorhabditis elegans... [more]
SAR1A_PONAB2.578e-1731.25GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A... [more]
SAR1A_HUMAN2.578e-1731.25GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A... [more]
ARL3_YEAST2.578e-1739.23ADP-ribosylation factor-like protein 3 OS=Saccharo... [more]
ARL10_HUMAN2.578e-1738.51ADP-ribosylation factor-like protein 10 OS=Homo sa... [more]
SAR1A_ARATH5.744e-1732.39GTP-binding protein SAR1A OS=Arabidopsis thaliana ... [more]
SAR1A_PIG7.502e-1730.47GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-A03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675617 ID=EY675617; Name=EY675617; organism=Citrus sinensis; type=EST; length=948bp
GATAACAGAAAATGCCGCTGTCATTTACGAAGCTTTTTAGCCGGCTTTTT
GCCACCCAGAGATGCGAATTCTGATGGTGGGTCTCGACGCTGCTGGTAAG
ACCACCATTTTGTACAAGCTCAAGCTCGGTGAGATTGTGACAACCATTCC
TACCATTGGTTTCAACGTGGAGACTGTGGAATATAAGAACATTAGCTTCA
CTGTTTGGGATGTTGGGGGTCAGGATAAGATTCGTCCTTTGTGGAGACAT
TACTTCCAAAACACTCAAGGACTTATCTTTGTGGTTGATAGCAATGATCG
TGACCGTGTGGTTGAAGCTAGAGATGAACTGCACCGGATGCTGAATGAGG
ATGAGTTGAGGGATGCTGTGCTGCTTGTTTTTGCCAACAAGCAAGATCTT
CCAAAGGCCATGAATGCTGCAAAGATCACTGATAAGCTTGGTCTTCACTC
CCTTCGTCAACGCCACGGGTACCTCCAGAGCACATGTGCCACATCTGGGG
AAGGGATCTAAGAAGGGTCTGGAACGGGTCCTCAAACAACATCCCAAAAC
AAAGGCTAATTTAATTGGTCCAAGTCTAAAACGAAATCTTTGCAGGCACA
TCCAAGGAGAAAGGAGGTTACTAGGCCTTTTGGTTTTTTTTGGGCGGGGG
ATTCTTTTTGGGGGTTTTAACAACCCAAAATCAAAAAAAATAGAAATTTG
GTATTGTGATAAAAAATTAAAATTATGGGACCCAAAAAAAAAAAAGTTTT
TTATCGCATAAAGCCTTTTGGAAAAGGATGAAAAATAACACCCCCAATTT
ATTTAGGAAATAATAAAGGGAGAATTTTATTGGGGCGAGTGAGTAATCCA
CCACTAAAAGTCATCACTCCATATAGTGACGGTGGAGAAGAGATGTGGCA
AAGAAAATATATTTTTATTATTAAACCCACCCAAAATAAGAAAATGAT
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