EY675617

Overview
NameEY675617
Unique NameEY675617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length948
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.863e-16
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 2
Query:   59 EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGL 445
            E +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W+ Y+     ++++VD+ D++R  E++ EL  +L++D L     L+  NK D P A +  ++   LGL
Sbjct:   20 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGL 148          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.294e-16
Identity = 44/129 (34.11%), Postives = 69/129 (53.49%), Query Frame = 2
Query:   68 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSL 454
            I+ VGLD AGK+T+L  LK     T  PT     + +   +I F  +D+GG +  R LW  Y  N+ G++F+VDS D  R  E+R  L  +L+  +L    +L+ +NK D+  A++   +    G+  L
Sbjct:   23 IVFVGLDNAGKSTLLAMLKNSATTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHL 151          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARL10_MOUSE (ADP-ribosylation factor-like protein 10 OS=Mus musculus GN=Arl10 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.083e-15
Identity = 54/148 (36.49%), Postives = 81/148 (54.73%), Query Frame = 2
Query:   41 PAFCHPEMR-ILMVGLDAAGKTTILYKLK-LGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLG-LHSLRQRHGYL 475
            PA    E R +L++GLD +GK+T L  L     +   +PT GFN   +  KN    + ++G    +R  W+ +      L+F+VDS DR R+  AR EL ++L+ D   D  +++ ANKQDL  AMN  ++  +LG L S  QR  +L
Sbjct:   69 PALEELEQREVLVLGLDGSGKSTFLRMLAGKPPVEGHVPTWGFNSVRLPTKNFEVDLLEIGDSQNLRFYWKEFVNEVDVLVFMVDSTDRLRLPWARQELQKLLDRDP--DLPVVIVANKQDLSGAMNMVELQQELGLLASYNQREVFL 214          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARLX_DICDI (ADP-ribosylation factor-like protein DDB_G0292332 OS=Dictyostelium discoideum GN=DDB_G0292332 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.415e-15
Identity = 44/124 (35.48%), Postives = 74/124 (59.68%), Query Frame = 2
Query:   65 RILMVGLDAAGKTTILYKLK--LGEIVTT---------IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF-QNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDL 400
            +++++G++  GKTT+LY +     E +TT         IPT GFNVE++  + + F +WD+GG++  R  +RHY       +IFV DS+D + + E++ E   + N+  L++   L+ ANKQDL
Sbjct:   19 KVMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDL 142          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARL9_HUMAN (ADP-ribosylation factor-like protein 9 OS=Homo sapiens GN=ARL9 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.485e-14
Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = 2
Query:   65 RILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGL 445
            +IL++GLD AGKT++L+ L    +  ++ PT GF+   +  ++      ++GG    R  W  Y      LIFVVDS D  R+ EA+  LH+++  + +    L+VFANKQDL  A +   I + L L
Sbjct:   20 QILVLGLDGAGKTSVLHSLASNRVQHSVAPTQGFHAVCINTEDSQMEFLEIGGSKPFRSYWEMYLSKGLLLIFVVDSADHSRLPEAKKYLHQLIAANPV--LPLVVFANKQDLEAAYHITDIHEALAL 145          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: SAR1_ENCCU (Small COPII coat GTPase SAR1 OS=Encephalitozoon cuniculi GN=SAR1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.260e-12
Identity = 43/133 (32.33%), Postives = 70/133 (52.63%), Query Frame = 2
Query:    2 ITENAAVIYEAF*PAFCHPEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDL 400
            +TE    +++ F  +       IL +G+D AGKTT++ KLK       +PT   +   +E  N+   V D+GG    R  WR YF +  G++F+VD +D +R  E R+    +L+ +  + A ++V  NK DL
Sbjct:   16 LTEFYEKVFQNFVKSLFGKPSSILFLGIDNAGKTTLVNKLKSDSTDVYMPTHHPSTSYIEIGNLKAQVIDLGGHTAARLAWRDYFYDCHGIVFIVDVHDVERFQEVREAYETVLSLE--KRAPVVVLMNKIDL 146          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: SAR1_TOBAC (GTP-binding protein SAR1 OS=Nicotiana tabacum GN=SAR1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.114e-11
Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 2
Query:   59 EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLN 346
            E +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W+ Y+     ++++VDS D++R  E++ EL  +L+
Sbjct:   20 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDSFDKERFAESKKELDALLS 115          
The following BLAST results are available for this feature:
BLAST of EY675617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
SAR1B_BRACM4.863e-1634.88GTP-binding protein SAR1B OS=Brassica campestris G... [more]
SAR1_GIALA8.294e-1634.11GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR... [more]
ARL10_MOUSE1.083e-1536.49ADP-ribosylation factor-like protein 10 OS=Mus mus... [more]
ARLX_DICDI1.415e-1535.48ADP-ribosylation factor-like protein DDB_G0292332 ... [more]
ARL9_HUMAN3.485e-1435.94ADP-ribosylation factor-like protein 9 OS=Homo sap... [more]
SAR1_ENCCU4.260e-1232.33Small COPII coat GTPase SAR1 OS=Encephalitozoon cu... [more]
SAR1_TOBAC2.114e-1136.46GTP-binding protein SAR1 OS=Nicotiana tabacum GN=S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-A03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675617 ID=EY675617; Name=EY675617; organism=Citrus sinensis; type=EST; length=948bp
GATAACAGAAAATGCCGCTGTCATTTACGAAGCTTTTTAGCCGGCTTTTT
GCCACCCAGAGATGCGAATTCTGATGGTGGGTCTCGACGCTGCTGGTAAG
ACCACCATTTTGTACAAGCTCAAGCTCGGTGAGATTGTGACAACCATTCC
TACCATTGGTTTCAACGTGGAGACTGTGGAATATAAGAACATTAGCTTCA
CTGTTTGGGATGTTGGGGGTCAGGATAAGATTCGTCCTTTGTGGAGACAT
TACTTCCAAAACACTCAAGGACTTATCTTTGTGGTTGATAGCAATGATCG
TGACCGTGTGGTTGAAGCTAGAGATGAACTGCACCGGATGCTGAATGAGG
ATGAGTTGAGGGATGCTGTGCTGCTTGTTTTTGCCAACAAGCAAGATCTT
CCAAAGGCCATGAATGCTGCAAAGATCACTGATAAGCTTGGTCTTCACTC
CCTTCGTCAACGCCACGGGTACCTCCAGAGCACATGTGCCACATCTGGGG
AAGGGATCTAAGAAGGGTCTGGAACGGGTCCTCAAACAACATCCCAAAAC
AAAGGCTAATTTAATTGGTCCAAGTCTAAAACGAAATCTTTGCAGGCACA
TCCAAGGAGAAAGGAGGTTACTAGGCCTTTTGGTTTTTTTTGGGCGGGGG
ATTCTTTTTGGGGGTTTTAACAACCCAAAATCAAAAAAAATAGAAATTTG
GTATTGTGATAAAAAATTAAAATTATGGGACCCAAAAAAAAAAAAGTTTT
TTATCGCATAAAGCCTTTTGGAAAAGGATGAAAAATAACACCCCCAATTT
ATTTAGGAAATAATAAAGGGAGAATTTTATTGGGGCGAGTGAGTAATCCA
CCACTAAAAGTCATCACTCCATATAGTGACGGTGGAGAAGAGATGTGGCA
AAGAAAATATATTTTTATTATTAAACCCACCCAAAATAAGAAAATGAT
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