EY675612

Overview
NameEY675612
Unique NameEY675612
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length953
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 6.843e-39
Identity = 69/143 (48.25%), Postives = 96/143 (67.13%), Query Frame = 1
Query:   13 WGVTNSPIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNN------MPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLGH 423
            WG    P+VPGHEIVG V +VG++V++F  GD VGVG + ++C+ C +C+ G ENYC  ++ ++N+   DG   +GG+S+L VV+Q YV+R P         PLD  APL+CAG+ +Y PM+  G+  PG  LGVA LGGLGH
Sbjct:   56 WGNAKYPVVPGHEIVGVVAEVGSSVARFAAGDTVGVGYIASTCRACANCRDGFENYCAGLVPSFNAALPDGATVHGGFSELAVVNQRYVVRIPGGGGGASPAPLDRLAPLLCAGVTVYCPMRRLGLDRPGVHLGVAGLGGLGH 198          

HSP 2 Score: 29.6462 bits (65), Expect = 6.843e-39
Identity = 14/37 (37.84%), Postives = 22/37 (59.46%), Query Frame = 2
Query:  407 LVGLDMVVRKIDKVFGLKDTILDTTPKNKNETI*KLG 517
            L GL  +  K  K FG+K T++ T+P  + E + +LG
Sbjct:  193 LGGLGHLAVKFGKAFGVKVTVISTSPWKEAEAVERLG 229          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.962e-38
Identity = 75/144 (52.08%), Postives = 98/144 (68.06%), Query Frame = 1
Query:    4 RVRWGVTNSPIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLGHGSEK 435
            R + G +  P+VPGHEI G VT+VG NV +FK GD VGVG  V SC++CE C +G E  C   + T+N ID DG+ T GGYS  IVV + Y  + P + PL++ APL+CAGI +Y+PM  + M +PGK+LGV  LGGLGH + K
Sbjct:   56 RNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLGHMAVK 199          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 6.170e-35
Identity = 63/136 (46.32%), Postives = 97/136 (71.32%), Query Frame = 1
Query:   16 GVTNSPIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLGH 423
            G+++ P+VPGHE+VG V +VG++V++FK GD VGVGV+V SC+ C  C+  +E YC   I +YN +  DG  T GG+++ +VV Q +V+R P+ M  +  APL+CAG+ +YSP+K++G+ + G   G+  LGG+GH
Sbjct:   59 GMSHYPMVPGHEVVGEVVEVGSDVTRFKVGDVVGVGVIVGSCKNCHPCKSEIEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVHQKFVVRIPDGMSPEQAAPLLCAGLTVYSPLKHFGLKQSGLRGGILGLGGVGH 194          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.052e-34
Identity = 64/136 (47.06%), Postives = 93/136 (68.38%), Query Frame = 1
Query:   16 GVTNSPIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLGH 423
            G++N P+VPGHE+VG V +VG++VSKF  GD VGVG LV  C  C  C++ LE YCP  I +YN +  +G  T GG++   VV Q +V++ P  M ++  APL+CAG+ +YSP+ ++G+ +PG   G+  LGG+GH
Sbjct:   59 GMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGH 194          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.795e-34
Identity = 63/136 (46.32%), Postives = 93/136 (68.38%), Query Frame = 1
Query:   16 GVTNSPIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLGH 423
            G++N P+VPGHE+VG V +VG++VSKF  GD VGVGV+V  C  C+ C   LE YC   I +YN +  DG  T GG++D ++V+Q +V++ P  M ++  APL+CAG+ +YSP+ ++G+   G   G+  LGG+GH
Sbjct:   60 GMSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIWSYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMASGLKGGILGLGGVGH 195          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.345e-34
Identity = 65/136 (47.79%), Postives = 93/136 (68.38%), Query Frame = 1
Query:   16 GVTNSPIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLGH 423
            G++N P+VPGHE+VG V +VG +VSKFK GD VGVG+LV SC+ C  C++ +E YC   I   N +  DG  T GG+++ +VVDQ++V++ P  M  +  APL+CAGI +YSP  ++G  + G   G+  LGG+GH
Sbjct:   59 GMSNYPLVPGHEVVGKVVEVGADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFGFNQSGFRGGILGLGGVGH 194          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.062e-34
Identity = 65/136 (47.79%), Postives = 92/136 (67.65%), Query Frame = 1
Query:   16 GVTNSPIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLGH 423
            G++N P+VPGHE+VG V +VG +VSKFK GD VGVG+LV SC+ C  C++ +E YC   I   N +  DG  T GG++  +VVDQ +V++ P  M  +  APL+CAGI +YSP+ ++G  + G   G+  LGG+GH
Sbjct:   59 GMSNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWNCNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFGFKQSGLRGGILGLGGVGH 194          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.062e-34
Identity = 62/136 (45.59%), Postives = 92/136 (67.65%), Query Frame = 1
Query:   16 GVTNSPIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLGH 423
            G++N P+VPGHE+VG V +VG+ V+KF+ GD VGVG +V SC  C  C   +E YC   I +YN +  DG  T GG++  +VVDQ +V++ P+ M  +  APL+CAG+ +YSP+ ++G+ + G   G+  LGG+GH
Sbjct:   59 GMSNYPMVPGHEVVGEVVEVGSEVTKFRAGDVVGVGCIVGSCGNCRPCNSDIEQYCNKKIWSYNDVYPDGKPTQGGFAGAMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLNHFGLKQSGLRGGILGLGGVGH 194          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.999e-34
Identity = 62/136 (45.59%), Postives = 92/136 (67.65%), Query Frame = 1
Query:   16 GVTNSPIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLGH 423
            G +  P+VPGHE+VG V +VG  V+K+  GD VGVGV+V  C++C  C+  +E YC   I +YN +  DG  T GG++  +VVDQ +V++ P  +  +  APL+CAG+ +YSP+K++G+T PG   G+  LGG+GH
Sbjct:   59 GASKYPMVPGHEVVGEVVEVGPEVAKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNPGLRGGILGLGGVGH 194          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.822e-34
Identity = 68/138 (49.28%), Postives = 90/138 (65.22%), Query Frame = 1
Query:   13 WGVTNSPIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPN-MILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLGH 423
            WG    P+VPGHEI G VT VG  V+K   GD+VGVG  V SC +CE C    E +C   ++ TYNS+D DG  TYGGYS  IVV   +V+R P+ + +D  +PL+CAGI  YSP+K++ +  PGK + +  +GGLGH
Sbjct:   55 WGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNV-GPGKKVAIVGVGGLGH 191          
The following BLAST results are available for this feature:
BLAST of EY675612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
CADH9_ORYSJ6.843e-3948.25Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CADH1_ARATH5.962e-3852.08Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
CADH_POPDE6.170e-3546.32Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH5_ARATH1.052e-3447.06Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH4_ARATH1.795e-3446.32Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH2_TOBAC2.345e-3447.79Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH1_TOBAC3.062e-3447.79Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH1_OCIBA3.062e-3445.59Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH_MAIZE3.999e-3445.59Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
ADHA_BACSU6.822e-3449.28Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-H08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675612 ID=EY675612; Name=EY675612; organism=Citrus sinensis; type=EST; length=953bp
CCACGCGTCCGATGGGGTGTCACCAATTCCCCAATTGTTCCCGGGCATGA
AATTGTTGGTACTGTGACCCAAGTTGGAAATAACGTGTCAAAATTCAAAG
AGGGTGACAAGGTTGGAGTTGGGGTCTTGGTAGCCTCCTGCCAAAAATGT
GAAAGCTGTCAGCAGGGCTTGGAGAATTACTGTCCTAATATGATACTTAC
ATATAACTCCATTGATCGTGATGGAACAAAAACTTATGGTGGTTACTCAG
ATCTGATTGTTGTTGATCAGCATTATGTGCTCCGCTTTCCAAACAACATG
CCTCTTGATGCGGGTGCACCACTTATGTGTGCGGGGATCAAAATGTACAG
CCCAATGAAATATTATGGAATGACTGAACCCGGTAAAGCTTTGGGTGTAG
CAAGACTTGGTGGGCTTGGACATGGTAGTGAGAAAAATTGACAAAGTCTT
TGGATTGAAAGACACCATCCTCGATACTACTCCAAAAAATAAAAATGAAA
CGATATAAAAACTTGGACGCAGAAACAATCCCCTAGATTTCATATGAATC
AGACAAAATTTAAAGGTGACATTGGGGCCCCAATAAATTAAGATAATAAG
AAAATAATACCACCAATGCATGACCATGTGATCTAAAAAAAGAACTACGA
GAAAAGTAAAGAAGCAAAACTAGTGTCCCAGTGGGCGATGACGTAGAAAG
GGCCAGTAAAAGTACCAAAAAGTTTGGTAATAGCAAAAGAGAACCGAGAA
ACCAACTATTCAAATAAAAACAAATAACTATAATTACACAAGACTTAAAA
AACAACAAAGAGGAATGAGATGAAGCAAAGGAGTTGAGAGGATAACTAGT
AACGGGAACACGGTGGTGAAACAGATAGAGGGGGGCCTGAAAGCGAAGCG
AGATTAGAACGTGATGATATAAATGAACAAAGAGAATACAAAGAATGAGT
GCC
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