EY675612

Overview
NameEY675612
Unique NameEY675612
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length953
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: ADH1_CAEEL (Alcohol dehydrogenase 1 OS=Caenorhabditis elegans GN=sodh-1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.523e-12
Identity = 49/133 (36.84%), Postives = 74/133 (55.64%), Query Frame = 1
Query:   31 PIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLGHGS 429
            P+V GHE  G+V Q+G NV+ ++ GDK GV ++  +C  CE C++G E  C + I  Y   DR G  T+  Y  +  VD   + +  N   L A AP++CAG+ +Y  +K   +  PG+ + +   GG G GS
Sbjct:   64 PLVGGHEGAGSVVQIGKNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLC-HHIQNY-GFDRSG--TFQEYLTIRGVDAAKINKDTN---LAAAAPILCAGVTVYKALKESNVA-PGQIIVLTGAGG-GLGS 187          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: ADH4_KLULA (Alcohol dehydrogenase 4, mitochondrial OS=Kluyveromyces lactis GN=ADH4 PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.303e-12
Identity = 43/131 (32.82%), Postives = 61/131 (46.56%), Query Frame = 1
Query:   31 PIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVA-RLGGLG 420
            P+V GHE  G V   G NV  F+ GD  G+  L  SC  CE C+QG E+ C          D  G    G +      D     + P    L   AP++CAG+ +Y  +K   + +PG+ + ++   GGLG
Sbjct:   89 PLVGGHEGAGIVVAKGENVKNFEIGDYAGIKWLNGSCMSCELCEQGYESNC-------LQADLSGYTHDGSFQQYATADAVQAAQIPKGTDLAEIAPILCAGVTVYKALKTADL-KPGQWVAISGAAGGLG 211          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: ADH2_CAEEL (Alcohol dehydrogenase 2 OS=Caenorhabditis elegans GN=sodh-2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.620e-12
Identity = 43/133 (32.33%), Postives = 71/133 (53.38%), Query Frame = 1
Query:   31 PIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLGHGS 429
            P++ GHE  GTV  +G+ V  +  GD+ G+ ++ A+C  CE C+ G E  C + I  Y  IDR GT     + + + +     ++  N+  L A AP++C G+  Y  +K   + +PG+ + +   GG G GS
Sbjct:   65 PLIGGHEGAGTVVTIGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLCDH-IQNY-GIDRHGT-----FQEYLTIRDIDAIKVSNDTNLAAAAPVLCGGVTAYKSLKATNV-KPGQIVVLTGAGG-GLGS 188          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: ADH2_CANAL (Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.339e-12
Identity = 46/134 (34.33%), Postives = 60/134 (44.78%), Query Frame = 1
Query:   22 TNSPIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVA-RLGGLG 420
            T  P+V GHE  G V  +G NV  +K GD  GV  L  SC  CE CQ G E  C          D  G    G +      D     R P    L   AP++CAG+ +Y  +K   + E G+ + ++   GGLG
Sbjct:   59 TKLPLVGGHEGAGVVVALGENVKGWKVGDYAGVKWLNGSCLNCEYCQSGAEPNCA-------EADLSGYTHDGSFQQYATADAVQAARIPAGTDLANVAPILCAGVTVYKALKTAEL-EAGQWVAISGAAGGLG 184          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: ADH1_ZYMMO (Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=adhA PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.586e-12
Identity = 39/129 (30.23%), Postives = 60/129 (46.51%), Query Frame = 1
Query:   37 VPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLGH 423
            + GHE +G V QVG  V+  K GD+  V      C  CE C  G E  C N       ++  G    G  ++  +V   Y ++ P+ +     + + CAG+  Y  +K     +PG+ L +  LGGLG+
Sbjct:   55 ITGHEGIGIVKQVGEGVTSLKVGDRASVAWFFKGCGHCEYCVSGNETLCRN-------VENAGYTVDGAMAEECIVVADYSVKVPDGLDPAVASSITCAGVTTYKAVK-VSQIQPGQWLAIYGLGGLGN 175          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: ADH1_PICST (Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.586e-12
Identity = 45/136 (33.09%), Postives = 61/136 (44.85%), Query Frame = 1
Query:   22 TNSPIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLGHGS 429
            T  P+V GHE  G V  +G+NV+ ++ GD  G+  L  SC  CE CQ   E  C          D  G    G +      D     R P    L   AP++CAGI +Y  +K     +PG  + ++  GG G GS
Sbjct:   59 TKLPLVGGHEGAGVVVGIGSNVTGWELGDYAGIKWLNGSCLNCEFCQHSDEPNCA-------KADLSGYTHDGSFQQYATADAVQAARLPKGTDLAQAAPILCAGITVYKALK-TAQIQPGNWVCISGAGG-GLGS 185          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: ADH1_KLUMA (Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus GN=ADH1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.586e-12
Identity = 38/113 (33.63%), Postives = 52/113 (46.02%), Query Frame = 1
Query:   22 TNSPIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMK 360
            T  P+V GHE  G V  +G NV+ ++ GD  G+  L  SC  CE C+   E  CP         D  G    G +      D     R P N+ L   AP++CAG+ +Y  +K
Sbjct:   59 TKLPLVGGHEGAGIVVAMGENVTGWEIGDYAGIKWLNGSCMSCEECELSNEPNCP-------KADLSGYTHDGSFQQYATADAVQAARIPKNVDLAEVAPILCAGVTVYKALK 164          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: ADH1_CANAL (Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.586e-12
Identity = 45/136 (33.09%), Postives = 61/136 (44.85%), Query Frame = 1
Query:   22 TNSPIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLGHGS 429
            T  P+V GHE  G V  +G NV  +K GD  G+  L  SC  CE CQQG E  C          D  G    G +      D     + P    L   AP++CAG+ +Y  +K   +   G+ + ++  GG G GS
Sbjct:   61 TKLPLVGGHEGAGVVVGMGENVKGWKIGDFAGIKWLNGSCMSCEFCQQGAEPNC-------GEADLSGYTHDGSFEQYATADAVQAAKIPAGTDLANVAPILCAGVTVYKALKTADLA-AGQWVAISGAGG-GLGS 187          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: ADH3_YEAST (Alcohol dehydrogenase 3, mitochondrial OS=Saccharomyces cerevisiae GN=ADH3 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.635e-11
Identity = 40/130 (30.77%), Postives = 57/130 (43.85%), Query Frame = 1
Query:   31 PIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLG 420
            P+V GHE  G V ++G+NV  +K GD  G+  L  SC  CE C+ G E+ CP+        D  G    G +      D     +      L   AP++CAG+ +Y  +K   +            GGLG
Sbjct:   89 PLVGGHEGAGVVVKLGSNVKGWKVGDLAGIKWLNGSCMTCEFCESGHESNCPD-------ADLSGYTHDGSFQQFATADAIQAAKIQQGTDLAEVAPILCAGVTVYKALKEADLKAGDWVAISGAAGGLG 211          
BLAST of EY675612 vs. ExPASy Swiss-Prot
Match: ADH2_KLUMA (Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus GN=ADH2 PE=3 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.635e-11
Identity = 42/133 (31.58%), Postives = 56/133 (42.11%), Query Frame = 1
Query:   22 TNSPIVPGHEIVGTVTQVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPNNMPLDAGAPLMCAGIKMYSPMKYYGMTEPGKALGVARLGGLG 420
            T  P+V GHE  G V  +G+NV  +K GD  G+  L  SC  CE C+   E+ CP+        D  G    G +      D       P    L   AP++CAG+ +Y  +K   M            GGLG
Sbjct:   59 TKLPLVGGHEGAGVVVAMGDNVKGWKIGDLAGIKWLNGSCMNCEECELSNESNCPD-------ADLSGYTHDGSFQQYATADAVQAAHIPAGTDLAQVAPILCAGVTVYKALKTAEMKAGDWVAISGAAGGLG 184          
The following BLAST results are available for this feature:
BLAST of EY675612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
ADH1_CAEEL2.523e-1236.84Alcohol dehydrogenase 1 OS=Caenorhabditis elegans ... [more]
ADH4_KLULA4.303e-1232.82Alcohol dehydrogenase 4, mitochondrial OS=Kluyvero... [more]
ADH2_CAEEL5.620e-1232.33Alcohol dehydrogenase 2 OS=Caenorhabditis elegans ... [more]
ADH2_CANAL7.339e-1234.33Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH... [more]
ADH1_ZYMMO9.586e-1230.23Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=ad... [more]
ADH1_PICST9.586e-1233.09Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1... [more]
ADH1_KLUMA9.586e-1233.63Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus... [more]
ADH1_CANAL9.586e-1233.09Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH... [more]
ADH3_YEAST1.635e-1130.77Alcohol dehydrogenase 3, mitochondrial OS=Saccharo... [more]
ADH2_KLUMA1.635e-1131.58Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-H08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675612 ID=EY675612; Name=EY675612; organism=Citrus sinensis; type=EST; length=953bp
CCACGCGTCCGATGGGGTGTCACCAATTCCCCAATTGTTCCCGGGCATGA
AATTGTTGGTACTGTGACCCAAGTTGGAAATAACGTGTCAAAATTCAAAG
AGGGTGACAAGGTTGGAGTTGGGGTCTTGGTAGCCTCCTGCCAAAAATGT
GAAAGCTGTCAGCAGGGCTTGGAGAATTACTGTCCTAATATGATACTTAC
ATATAACTCCATTGATCGTGATGGAACAAAAACTTATGGTGGTTACTCAG
ATCTGATTGTTGTTGATCAGCATTATGTGCTCCGCTTTCCAAACAACATG
CCTCTTGATGCGGGTGCACCACTTATGTGTGCGGGGATCAAAATGTACAG
CCCAATGAAATATTATGGAATGACTGAACCCGGTAAAGCTTTGGGTGTAG
CAAGACTTGGTGGGCTTGGACATGGTAGTGAGAAAAATTGACAAAGTCTT
TGGATTGAAAGACACCATCCTCGATACTACTCCAAAAAATAAAAATGAAA
CGATATAAAAACTTGGACGCAGAAACAATCCCCTAGATTTCATATGAATC
AGACAAAATTTAAAGGTGACATTGGGGCCCCAATAAATTAAGATAATAAG
AAAATAATACCACCAATGCATGACCATGTGATCTAAAAAAAGAACTACGA
GAAAAGTAAAGAAGCAAAACTAGTGTCCCAGTGGGCGATGACGTAGAAAG
GGCCAGTAAAAGTACCAAAAAGTTTGGTAATAGCAAAAGAGAACCGAGAA
ACCAACTATTCAAATAAAAACAAATAACTATAATTACACAAGACTTAAAA
AACAACAAAGAGGAATGAGATGAAGCAAAGGAGTTGAGAGGATAACTAGT
AACGGGAACACGGTGGTGAAACAGATAGAGGGGGGCCTGAAAGCGAAGCG
AGATTAGAACGTGATGATATAAATGAACAAAGAGAATACAAAGAATGAGT
GCC
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