EY675609

Overview
NameEY675609
Unique NameEY675609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1043
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY675609 vs. ExPASy Swiss-Prot
Match: UBIQ_ACECL (Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.200e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 2 
Query:  119 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 346
            MQIFVKTLTGKTITLEVESSDT++NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 69.3218 bits (168), Expect = 4.153e-11
Identity = 37/49 (75.51%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:  347 MQIFVKTLNGKTITLEVESSDTIDNVKAKDQDKGGIPPGQA*GSYFAGK 493
            MQIFVKTL GKTITLEVESSDT++NVK+K QDK GIPP Q     FAGK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQ-RLIFAGK 48
[Close]
BLAST of EY675609 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYCR (Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.567e-34
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:  119 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 346
            MQIFVKTLTGKTI LEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 68.9366 bits (167), Expect = 5.424e-11
Identity = 38/49 (77.55%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:  347 MQIFVKTLNGKTITLEVESSDTIDNVKAKDQDKGGIPPGQA*GSYFAGK 493
            MQIFVKTL GKTI LEVESSDTI+NVKAK QDK GIPP Q     FAGK
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQ-RLIFAGK 48
[Close]
BLAST of EY675609 vs. ExPASy Swiss-Prot
Match: UBIQ_ACACA (Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.567e-34
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:  119 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 346
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 68.9366 bits (167), Expect = 5.424e-11
Identity = 38/49 (77.55%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:  347 MQIFVKTLNGKTITLEVESSDTIDNVKAKDQDKGGIPPGQA*GSYFAGK 493
            MQIFVKTL GKTITLEVESSDTI+NVK K QDK GIPP Q     FAGK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQ-RLIFAGK 48
[Close]
BLAST of EY675609 vs. ExPASy Swiss-Prot
Match: UBIQ_GEOCY (Ubiquitin OS=Geodia cydonium PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.047e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 2 
Query:  119 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 346
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 69.707 bits (169), Expect = 3.180e-11
Identity = 38/49 (77.55%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:  347 MQIFVKTLNGKTITLEVESSDTIDNVKAKDQDKGGIPPGQA*GSYFAGK 493
            MQIFVKTL GKTITLEVE+SDTI+NVKAK QDK GIPP Q     FAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGK 48
[Close]
BLAST of EY675609 vs. ExPASy Swiss-Prot
Match: UBIQ_CAEEL (Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.047e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 2 
Query:  119 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 346
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 69.707 bits (169), Expect = 3.180e-11
Identity = 38/49 (77.55%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:  347 MQIFVKTLNGKTITLEVESSDTIDNVKAKDQDKGGIPPGQA*GSYFAGK 493
            MQIFVKTL GKTITLEVE+SDTI+NVKAK QDK GIPP Q     FAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGK 48
[Close]
BLAST of EY675609 vs. ExPASy Swiss-Prot
Match: UBIQ_EUPEU (Ubiquitin OS=Euplotes eurystomus PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.673e-34
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 2 
Query:  119 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 346
            MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 68.1662 bits (165), Expect = 9.252e-11
Identity = 37/49 (75.51%), Postives = 38/49 (77.55%), Query Frame = 2 
Query:  347 MQIFVKTLNGKTITLEVESSDTIDNVKAKDQDKGGIPPGQA*GSYFAGK 493
            MQIFVKTL GKTITL+VE SDTIDNVK K QDK GIPP Q     FAGK
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQ-RLIFAGK 48
[Close]
BLAST of EY675609 vs. ExPASy Swiss-Prot
Match: UBIQ_AGLNE (Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.673e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:  119 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 346
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 69.3218 bits (168), Expect = 4.153e-11
Identity = 38/49 (77.55%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:  347 MQIFVKTLNGKTITLEVESSDTIDNVKAKDQDKGGIPPGQA*GSYFAGK 493
            MQIFVKTL GKTITLEVESSDTI+NVK K QDK GIPP Q     FAGK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQ-RLIFAGK 48
[Close]
BLAST of EY675609 vs. ExPASy Swiss-Prot
Match: UBIQ_XENLA (Ubiquitin OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.491e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:  119 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 346
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 68.9366 bits (167), Expect = 5.424e-11
Identity = 38/49 (77.55%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:  347 MQIFVKTLNGKTITLEVESSDTIDNVKAKDQDKGGIPPGQA*GSYFAGK 493
            MQIFVKTL GKTITLEVE SDTI+NVKAK QDK GIPP Q     FAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGK 48
[Close]
BLAST of EY675609 vs. ExPASy Swiss-Prot
Match: UBIQ_SPOFR (Ubiquitin OS=Spodoptera frugiperda PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.491e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:  119 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 346
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 68.9366 bits (167), Expect = 5.424e-11
Identity = 38/49 (77.55%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:  347 MQIFVKTLNGKTITLEVESSDTIDNVKAKDQDKGGIPPGQA*GSYFAGK 493
            MQIFVKTL GKTITLEVE SDTI+NVKAK QDK GIPP Q     FAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGK 48
[Close]
BLAST of EY675609 vs. ExPASy Swiss-Prot
Match: UBIQ_RAT (Ubiquitin OS=Rattus norvegicus GN=Rps27a PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.491e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:  119 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 346
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 68.9366 bits (167), Expect = 5.424e-11
Identity = 38/49 (77.55%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:  347 MQIFVKTLNGKTITLEVESSDTIDNVKAKDQDKGGIPPGQA*GSYFAGK 493
            MQIFVKTL GKTITLEVE SDTI+NVKAK QDK GIPP Q     FAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGK 48
The following BLAST results are available for this feature:
BLAST of EY675609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
UBIQ_ACECL1.200e-3496.05Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1[more]
UBIQ_TRYCR1.567e-3497.37Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1[more]
UBIQ_ACACA1.567e-3497.37Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1[more]
UBIQ_GEOCY2.047e-3496.05Ubiquitin OS=Geodia cydonium PE=3 SV=1[more]
UBIQ_CAEEL2.047e-3496.05Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 ... [more]
UBIQ_EUPEU2.673e-3496.05Ubiquitin OS=Euplotes eurystomus PE=3 SV=1[more]
UBIQ_AGLNE2.673e-3496.05Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1[more]
UBIQ_XENLA3.491e-3496.05Ubiquitin OS=Xenopus laevis PE=1 SV=1[more]
UBIQ_SPOFR3.491e-3496.05Ubiquitin OS=Spodoptera frugiperda PE=3 SV=1[more]
UBIQ_RAT3.491e-3496.05Ubiquitin OS=Rattus norvegicus GN=Rps27a PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-H04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675609 ID=EY675609; Name=EY675609; organism=Citrus sinensis; type=EST; length=1043bp
CCACGCGTCCGCCCACGCGTCCGCCCACCCCTTTGATTAAACCAATAAAA
AAAAAAAGAAAAAGAAACACCCCCATACTTAGTTTAGATACCAAGGCTCC
CAATCTCAGCCTTCCAACATGCAGATCTTTGTGAAAACTTTGACCGGCAA
GACCATCACTCTCGAGGTGGAGAGCTCCGACACGATCGACAACGTCAAGG
CTAAGATCCAGGACAAGGAAGGGATTCCACCGGACCAGCAGCGGCTGATC
TTCGCCGGAAAGCAGCTCGAGGACGGGCGCACCTTGGCGGATTACAACAT
CCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCGCGGCGGCATGC
AGATCTTCGTCAAGACTCTGAACGGGAAGACAATCACCCTGGAGGTGGAG
AGCTCCGACACGATCGACAACGTGAAGGCGAAGGATCAGGACAAGGGAGG
GATCCCCCCCGGACAAGCATAAGGCTCATACTTCGCCGGCAAGACAACTG
GAGGACGGGCACACCCCTGGCCCAAATAAAAAACACAGAAAGGAAACCCA
CGCCCCACCTAGAGGTTGGGCCCGAAAGGGGAGGAAAGGCATATTTTCCC
TCTAAGAACTATAACGGGGGAATAACAATATACACTTGAAAGTTGGGAAA
GTATCTCAAAACAGATTATAAAAAACTATGAAAAGAGCAAAAGATTTAGG
GGAAAAAAGAGAGGGAAATGCCGCCACAGAATCAGAAGGAGGATTACCTA
ACATTGGTCGAGACGAGGAACATACAAGAAGAAGTAGATAGGGAGAAATA
ATGAAAAAGAATAAAATAATTAGAAATATGGAGGAAGTACACCCAACTAG
CTACAAATGAGATGAAACGTGGCAGGTTAAACAGTGATGGGAAGGGGGGT
TAGCAAATTTAGCAAAAAATGTATTACAATATTGTAAGGAGGATGGTATG
TGCCCCGACTGGTGGTAATGAGGTAGATGATAAAGTGGAAGTAAATGATA
AACTAAAAATTATAAATTAATCCAATTAAATAAATACANGTGT
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