EY675590

Overview
NameEY675590
Unique NameEY675590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675590 vs. ExPASy Swiss-Prot
Match: YF51_SCHPO (Uncharacterized protein C3C7.01c OS=Schizosaccharomyces pombe GN=SPAC3C7.01c PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 8.318e-11
Identity = 38/108 (35.19%), Postives = 58/108 (53.70%), Query Frame = 3 
Query:   12 RMWRRGPNLEGDTANFIETDQLLETEG-------FKSSLLQVRGSIPLLWEQIVDLSYKPQLKIINHDQTPKVVERHFRVLLQRYGE-IVAVDLTDKHGDEGQLSAAY 311
            R + RG N +G  ANF E +Q++  E           S  Q+RGSIP+ W ++ DL Y+P L +   D +  V  +HF+ L   YG+ +V V+L D+ G E  L + +
Sbjct:  217 RYFTRGVNAQGSAANFNEIEQIIMIESPITLEEQMVLSFTQIRGSIPMFWAEVNDLHYRPLLSLQPLDYSETVFGKHFQELANDYGDNLVVVNLLDQKGREAPLRSGF 324
The following BLAST results are available for this feature:
BLAST of EY675590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
YF51_SCHPO8.318e-1135.19Uncharacterized protein C3C7.01c OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-F02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675590 ID=EY675590; Name=EY675590; organism=Citrus sinensis; type=EST; length=970bp
CCACGCGTCCGCGAATGTGGAGAAGAGGACCTAATCTTGAAGGTGACACC
GCTAATTTTATAGAAACTGACCAGTTACTAGAGACGGAAGGTTTTAAATC
CTCACTATTGCAGGTTCGGGGCTCAATACCACTCCTCTGGGAGCAGATTG
TTGATTTGAGTTATAAGCCACAGCTTAAAATTATTAATCATGACCAAACA
CCAAAAGTTGTGGAGCGCCATTTCCGTGTTCTATTACAAAGATATGGAGA
AATTGTAGCAGTAGACCTTACCGATAAGCATGGTGATGAAGGTCAATTGA
GTGCAGCATATGCGGCTGAAATGCAGAAGCTTCCAAATATATGTCTCATT
TGACTTTCATCATGTTTGTGGCACTTCAAACTTTTGATAAGCTGCAAGTT
CTGTATGATCAGATTCAACAGGAGTTTTGATAACCAAGGCTGAACAGATA
TCTCCTCATAGACCCAGAAAGAAATATATTTAGAAGGGAGCAGAAAGGAG
TTATCACAATCCAACTGTATTGATTGTCTTTGATCAACAAAATGTCACCC
CAAAAGTAACCTGGGCTCAAAAAGTTTCCTAAATTTTACAGTTGCAAAAG
AATTGGGAATATTGTCTTCCCACATAGTGCATTTCCATTGTTCCAGAGGG
AAAAATGGAAAATTTCAGAATGTTTGTGGGGTTAAACAAGGGCACCAAAA
TAACTCACCCAAATTGCTAGGAACAATTGCGCCCGAAAGGGAAAACCATT
GTTCGAAAAGGGAAAGAGAAACAACAATGGGAGAGGGAGTCTGAAGTGGG
GGAAGGGGATATCTATTACAGAAACAAAATTAAAGGATGTGTTCTCAAGA
ACGGAGTATTAAAAGAAGGAGCCAATGACGAGAAGATAAATTAGAAGATA
TAAATTAATATCTTGTATAGAAATAAACAATATTAGGCTCTCTCGTAATT
TTTTGTGATTTTGATATTGG
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