EY675585

Overview
NameEY675585
Unique NameEY675585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_OCHA4 (Flavoprotein wrbA OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=wrbA PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.684e-25
Identity = 72/193 (37.31%), Postives = 98/193 (50.78%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLA 580
            V +++Y  YGH+E +AK   +        E  + RVPE +  +     H K+   D D P  + A+L + D  + G  TRYG MAAQMK F D TG LW +G L+ K     VS             +   Q+ H GM+ VP+ Y +  G    D +RGG+PYG    A GDG+R+PSE EL     QGK +A
Sbjct:    4 VLVLYYSAYGHMEKMAKAAAEGAREGGA-EVTIKRVPELVPPDVAKASHYKI---DQDAPIATPAELADYDAIIIGTATRYGMMAAQMKNFLDQTGGLWAKGALINKVGSVMVSTATQHGGAELALISTQWQMQHQGMIIVPLSYAY-QGQMGNDVVRGGAPYGMTTTADGDGSRQPSEQELDGARFQGKRVA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_ZYMMO (Flavoprotein wrbA OS=Zymomonas mobilis GN=wrbA PE=3 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.872e-25
Identity = 67/198 (33.84%), Postives = 107/198 (54.04%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGA-GVFAGDGTRKPSETELGLPEHQGKFLAAGSQK 595
            + +++Y  YGHVE +A  + +        E  + RVPE +  EA   +H K+   D   P     DL+E DG + G PTR+G + +QM  F+D TG +W +G L+GK    F S            ++ ++ L HHG++   + Y+F  G  ++D + GG+PYGA  + A DG+R+PS+ EL   +  GK +A  ++K
Sbjct:    4 ILVLYYSTYGHVESMAYAVAEGARAAGA-EADVKRVPELVPEEAAKKNHFKI---DQKAPIAEPKDLLEYDGIIVGAPTRFGRLPSQMANFWDRTGGIWAQGALIGKVGAVFTSTATQHGGQETTLYSLMSSLLHHGLVISGLPYSF-QGQGRLDEVTGGAPYGATTIAASDGSRQPSKNELDGAKFLGKHVAELAKK 196          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_RHOPT (Flavoprotein wrbA OS=Rhodopseudomonas palustris (strain TIE-1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.872e-25
Identity = 71/195 (36.41%), Postives = 99/195 (50.77%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGA-GVFAGDGTRKPSETELGLPEHQGKFLA 580
            A V +++Y  YGH+E +A  + +          +  RVPE +  +     H K+   D   P  +  DL   D  + G  TR+G MA+QM  F D  G LW  G L GK  G F S            ++ IT L H GM+ V + Y FG  M ++D + GG+PYGA  +  GDG+R+PSETEL    +QGK +A
Sbjct:    2 AKVLVLYYSAYGHIEAMANAVAEGAREAGAQVDIK-RVPELVPPDVAKASHYKL---DQAAPVATIEDLANYDAIVIGTGTRFGRMASQMSNFLDQAGGLWARGALNGKVGGAFTSTATQHGGQETTLFSIITNLLHFGMVVVGLNYGFGDQM-RLDQVTGGAPYGATTITGGDGSRQPSETELAGARYQGKTIA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_RHOPA (Flavoprotein wrbA OS=Rhodopseudomonas palustris GN=wrbA PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.872e-25
Identity = 71/195 (36.41%), Postives = 99/195 (50.77%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGA-GVFAGDGTRKPSETELGLPEHQGKFLA 580
            A V +++Y  YGH+E +A  + +          +  RVPE +  +     H K+   D   P  +  DL   D  + G  TR+G MA+QM  F D  G LW  G L GK  G F S            ++ IT L H GM+ V + Y FG  M ++D + GG+PYGA  +  GDG+R+PSETEL    +QGK +A
Sbjct:    2 AKVLVLYYSAYGHIEAMANAVAEGAREAGATVDIK-RVPELVPPDVAKASHYKL---DQAAPVATIEDLANYDAIVIGTGTRFGRMASQMSNFLDQAGGLWARGALNGKVGGAFTSTATQHGGQETTLFSIITNLLHFGMVVVGLNYGFGDQM-RLDQVTGGAPYGATTITGGDGSRQPSETELAGARYQGKTIA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_NITOC (Flavoprotein wrbA OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=wrbA PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.899e-25
Identity = 69/196 (35.20%), Postives = 99/196 (50.51%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQK 595
            + +++Y MYGHVE +A  + +        E  L RVPE +  E   +       +  P  +  +L E D  +FG PTR+G M AQM+ F D TG  W  G L+GK    F S             +  + L H GM+ V + Y+  A +  M+ I GGSPYGA   A  DG+R+PSE EL +   QG+ +A  ++K
Sbjct:    4 LLVLYYSMYGHVETMAHAVAEGARSVEEVEVTLKRVPELMPEEIARNAGAKLAQE-APIATVDELPEYDAIIFGTPTRFGNMCAQMRNFLDQTGKHWMSGALIGKVGSVFTSTASQHGGQETTITSFHSTLLHQGMVIVGVPYSCQA-LLNMNEITGGSPYGASTLADADGSRQPSENELTIARFQGEHVAKFTKK 197          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_METS4 (Flavoprotein wrbA OS=Methylobacterium sp. (strain 4-46) GN=wrbA PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.899e-25
Identity = 73/200 (36.50%), Postives = 99/200 (49.50%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQK 595
            A V +++Y  YGH+E +A  + +        E  + RVPE +  +     H K+   D   P     +L   D  +FG PTRYG MA+QMK F D TG LW +G LVGK    F S             +  T L HHGM+ V + Y F  G   +  + G SPYGA   A GDG+R+PS  EL    +QG+ +A  + K
Sbjct:    2 AKVLVLYYSTYGHIEQMAHAVAEGAREAGA-EVDVKRVPELVPEDVARKSHFKL---DQSAPLARVDELPNYDAIIFGTPTRYGNMASQMKNFLDQTGGLWMKGALVGKVGSVFTSSASQHGGQESTILSFHTVLLHHGMVLVGLPYAF-QGQLGVSQVMGNSPYGASTIADGDGSRQPSPIELDGARYQGRHVAGIAAK 196          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_RHOPS (Flavoprotein wrbA OS=Rhodopseudomonas palustris (strain BisB5) GN=wrbA PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.398e-25
Identity = 70/195 (35.90%), Postives = 99/195 (50.77%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAG-VFAGDGTRKPSETELGLPEHQGKFLA 580
            A V +++Y  YGH+E +A  + +          +  RVPE +  +     H K+   D   P  +  DL + D  + G  TR+G MA+QM  F D  G LW +G L GK  G F S            ++ IT L H GM+ V + Y F AG  K+D + GG+PYGA  +  GDG+R+PS  EL    +QGK +A
Sbjct:    2 AKVLVLYYSAYGHIEAMANAVAEGAREAGATVDIK-RVPELVPPDVAKASHYKL---DQAAPVATIGDLADYDAIVVGTGTRFGRMASQMANFLDQAGGLWAKGALHGKVGGAFTSTATQHGGQETTLFSIITNLLHFGMVVVGLNYGF-AGQMKLDEVTGGAPYGATTITGGDGSRQPSANELAGARYQGKTIA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_BRASO (Flavoprotein wrbA OS=Bradyrhizobium sp. (strain ORS278) GN=wrbA PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.398e-25
Identity = 70/196 (35.71%), Postives = 98/196 (50.00%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAG-VFAGDGTRKPSETELGLPEHQGKFLAAGSQK 595
            V +++Y  YGH+E +A  + +          +  RVPE L  + +        D   P     +L + D  + G  TR+G MA+QM  F D  G LW +G L GK  G F S            +T IT L H GM  V + Y F AG  K+D + GGSPYGA  +  GDG+R+PSE EL    +QG+ +A  ++K
Sbjct:    4 VLVLYYSAYGHIEAMANAVAEGAREAGATVDIK-RVPE-LVPDDVAKASYYKLDQAAPIAKIEELADYDAIIVGTGTRFGRMASQMANFLDQAGGLWAKGALNGKVGGAFTSTATQHGGQETTLFTIITNLLHFGMTIVGLNYGF-AGQMKLDEVTGGSPYGATTITGGDGSRQPSENELAGARYQGRVIAETAKK 196          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_AGRRK (Flavoprotein wrbA OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=wrbA PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.398e-25
Identity = 71/195 (36.41%), Postives = 100/195 (51.28%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLA 580
            A V +++Y  YGH+E +A  + +        E  + RVPE +  E     + K+   D + P  +  +L E D  + G  TR+G +A+QM+ F+D TG LW  GKLVGK    F S               I  L HHGM  V + Y F AG    + ++GGSPYGA     GDG+R+PSE EL   ++QG  +A
Sbjct:    2 AKVLVLYYSAYGHIEKMAYAVAEGAKSAGA-EVTVKRVPELVPEEVAKASYFKL---DQEAPIATPDELAEYDAIIVGAGTRFGTVASQMRNFWDQTGGLWFSGKLVGKVGSVFTSSATQHGGQESTILGFIPTLLHHGMAVVGLPYAF-AGQMGTEEVKGGSPYGASTITNGDGSRQPSEIELEAAKYQGAHVA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_AZOC5 (Flavoprotein wrbA OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=wrbA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 8.356e-25
Identity = 74/202 (36.63%), Postives = 100/202 (49.50%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALD--HMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQKPF 601
            A V +++Y  YGH+E +A  + +          +  RVPET   E     H K+   D   P  + ADL   D  + G PTR+G +A+QM AF D  G LW  G L GK    F S            ++ IT L H GM+ V + Y+   G   M  I GG+PYGA   A GDG+R+PSE +L    HQG+ +A  + K F
Sbjct:    2 AKVLVLYYSTYGHLETMANAVAEGARAAGATVDVK-RVPETAPDEVAKAAHFKL---DQAAPVATIADLEHYDAIIVGAPTRFGRIASQMAAFLDQAGGLWFRGALNGKVGAAFTSTATQHGGQETTLFSIITNLLHFGMVIVGLPYSH-QGQMSMSEIVGGAPYGATTLAAGDGSRQPSEIDLAGARHQGELVAKTAAKLF 198          
The following BLAST results are available for this feature:
BLAST of EY675585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_OCHA41.684e-2537.31Flavoprotein wrbA OS=Ochrobactrum anthropi (strain... [more]
WRBA_ZYMMO2.872e-2533.84Flavoprotein wrbA OS=Zymomonas mobilis GN=wrbA PE=... [more]
WRBA_RHOPT2.872e-2536.41Flavoprotein wrbA OS=Rhodopseudomonas palustris (s... [more]
WRBA_RHOPA2.872e-2536.41Flavoprotein wrbA OS=Rhodopseudomonas palustris GN... [more]
WRBA_NITOC4.899e-2535.20Flavoprotein wrbA OS=Nitrosococcus oceani (strain ... [more]
WRBA_METS44.899e-2536.50Flavoprotein wrbA OS=Methylobacterium sp. (strain ... [more]
WRBA_RHOPS6.398e-2535.90Flavoprotein wrbA OS=Rhodopseudomonas palustris (s... [more]
WRBA_BRASO6.398e-2535.71Flavoprotein wrbA OS=Bradyrhizobium sp. (strain OR... [more]
WRBA_AGRRK6.398e-2536.41Flavoprotein wrbA OS=Agrobacterium radiobacter (st... [more]
WRBA_AZOC58.356e-2536.63Flavoprotein wrbA OS=Azorhizobium caulinodans (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-E08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675585 ID=EY675585; Name=EY675585; organism=Citrus sinensis; type=EST; length=1023bp
CCACGCGTCCGTATTCATCGTGTTCTACCCCATGTATGGCCACGTGGAGG
GGTTGGCAAAGAGGATGACCAAGGGCGTTGATGGCGTTGACGGTGTGGAG
GGCCTGCTGTATCGGGTGCCCGAGACGTTGACGAGGGAGGCCTTGGACCA
CATGAAAGTGCCGCCGAGAGATGATGACATCCCGGAGATTTCGGCGGCGG
ATTTAGTGGAGGCTGACGGGTTCTTGTTTGGGTTTCCGACGAGGTATGGG
TGCATGGCGGCCCAAATGAAGGCTTTTTTCGACTCGACTGGCATGTTGTG
GAAAGAGGGTAAACTTGTCGGTAAACCCGCCGGTTTTTTTGTCAGCACTG
GCACTCAAGGTGGCGGTCAGGAAACCACTGCTTGGACTGCAATTACCCAG
TTGGCCCACCATGGAATGCTATTTGTTCCTATTGGGTACACCTTTGGAGC
CGGTATGTTCAAGATGGACTCTATTCGGGGAGGCTCTCCATATGGTGCTG
GTGTTTTCGCTGGTGATGGCACCAGAAAGCCAAGTGAAACAGAACTGGGA
CTACCAGAACATCAGGGCAAGTTTTTGGCAGCCGGTAGTCAAAAACCTTT
TCGAGGCTTTATCTTTTTAGGTCTTTCTTCCAACCCCCTCTCTTGTGGTT
GGAGTTTGGGTTTGCTTTTGTGATGAATTTTGGGGTTTTATGGGGTTGCC
GGCCACCCATTCCTTTTCTTCTTTTTTTTTTTCCCCAAAATTTCCTTTCC
TGGTTGAAAAAGGTGGTAAATGGAAATGGAAAATTTCTTTTCCCTTTTTT
GGCCCCCCCCACAATTAAAATTTTGGGTGAGAACCACCCGAGGAGATGGT
TTTCTTTTTGTAAAAACTTTTTTTTTTTTCTTTAACACGGTGGGGAAATT
TTTTATCAAGTTAATTATTTTTTTTAAGTGGGTGAAAAAAAATTTTTTCT
TTTAGTCGTTGGGGTGCGCCGAAAAAAGACAAAAAAAAAAAAAATAAATA
AAAAAAGAACATAAAAAAATAAC
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