EY675585

Overview
NameEY675585
Unique NameEY675585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA1_RHIME (Flavoprotein wrbA 1 OS=Rhizobium meliloti GN=wrbA1 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 8.356e-25
Identity = 68/195 (34.87%), Postives = 99/195 (50.77%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAG-VFAGDGTRKPSETELGLPEHQGKFLA 580
            A V +++Y  YGH+E +A  + +        E  + RVPE +  +     H K+   D   P  +  +L + D  +FG  TRYG +A+Q++ F D TG LW +GKLVGK    F S               I  + HHGM+ V + Y F  G   ++ ++GGSPYGA  +  GDG+R+PS  EL     QG  +A
Sbjct:    2 ARVLVLYYSAYGHIETMAHAVAEGARSAGA-EVAVKRVPELVPEDVAKASHFKL---DQPAPVATVEELADYDAIIFGAGTRYGTVASQLRNFIDQTGGLWAKGKLVGKVGSAFTSSATQHGGQESTILGLIPTMMHHGMVVVGLPYAF-QGQMGVEEVKGGSPYGASTITGGDGSRQPSAVELEAARFQGAHVA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_BURP8 (Flavoprotein wrbA OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=wrbA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.091e-24
Identity = 72/200 (36.00%), Postives = 101/200 (50.50%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAG-VFAGDGTRKPSETELGLPEHQGKFLAAGSQKPF 601
            A V +++Y  YGH+E +A+ + +          +  RVPET+  E          D   P  + ADL + D  + G  TRYG +++QM AF D TG LW  G L GK    F S            ++ IT L H GM+ V + Y+   GM  M  I GG+PYGA  + AGDG+R+PS  +L    HQG+ +A  + K F
Sbjct:    2 ARVLVLYYSSYGHIEKMAEAIAEGARGAGAQVDIK-RVPETVPEEIAKKANFK-LDQQAPIATVADLEQYDAIVVGTGTRYGRISSQMAAFLDQTGGLWMRGALNGKVGAAFASTATQHGGQETTLFSIITNLMHLGMIIVGLPYSH-QGMMNMTEIVGGAPYGATTIAAGDGSRQPSAIDLEGARHQGELVAKTAAKLF 198          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_RHOP5 (Flavoprotein wrbA OS=Rhodopseudomonas palustris (strain BisA53) GN=wrbA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.425e-24
Identity = 71/195 (36.41%), Postives = 98/195 (50.26%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAG-VFAGDGTRKPSETELGLPEHQGKFLA 580
            A V +++Y  YGH+E +A+ + +          +  RVPE +  E     H K+   D   P  S  DL   D  + G  TR+G MA+QM  F D  G LW +G L GK  G F S            ++ IT L H GM+ V + Y F AG   +D + GGSPYGA  +  GDG+R+PS  EL    +QG+ +A
Sbjct:    2 AKVLVLYYSAYGHIETMAQAVAEGARAAGATVDIK-RVPELVPAEVAKASHYKL---DQAAPVASIDDLANYDAIIVGTGTRFGRMASQMANFLDQAGGLWAKGALHGKVGGAFTSTATQHGGQETTLFSIITNLLHFGMVVVGLNYGF-AGQMTLDEVTGGSPYGATTITGGDGSRQPSANELAGARYQGQVIA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_BRASB (Flavoprotein wrbA OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=wrbA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.425e-24
Identity = 71/198 (35.86%), Postives = 97/198 (48.99%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAG-VFAGDGTRKPSETELGLPEHQGKFLAAGSQK 595
            V +++Y  YGH+E +A  + +          +  RVPE +  +     H K+   D   P     +L   D  + G  TR+G MA+QM  F D  G LW  G L GK  G F S            +T IT L H GM  V + Y F AG  K+D + GGSPYGA  +  GDG+R PSE EL    +QG+ +A  ++K
Sbjct:    4 VLVLYYSAYGHIEAMANAVAEGAREAGATVDVK-RVPELVPDDVAKASHYKL---DQAAPIAKIEELANYDAIIVGTGTRFGRMASQMANFLDQAGGLWARGALNGKVGGAFTSTATQHGGQETTLFTIITNLLHFGMTIVGLNYGF-AGQMKLDEVTGGSPYGATTITGGDGSRLPSENELAGARYQGRVIAETAKK 196          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_AGRT5 (Flavoprotein wrbA OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=wrbA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.425e-24
Identity = 70/193 (36.27%), Postives = 96/193 (49.74%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLA 580
            V +++Y  YGH+E +A  + +        E ++ RVPE +  E     H K+   D   P  +  +L E D  + G  TR+G +A+QM+ F+D TG LW  GKLVGK    F S               I    HHGM  V + Y F  G   +D I+GGSPYGA     GDG+R+PS  EL    +QG  +A
Sbjct:    4 VLVLYYSSYGHIETMAYAVAEGVESTGA-EAVVKRVPELVPEEVAKSSHFKM---DQPAPVATVDELAEYDAIIVGAGTRFGTVASQMRNFWDQTGGLWFSGKLVGKVGSAFTSSATQHGGQESTILGFIPTFLHHGMAVVGLPYAF-QGQMGVDEIKGGSPYGASTITDGDGSRQPSAIELDAARYQGAHVA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_RALME (Flavoprotein wrbA OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=wrbA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.862e-24
Identity = 73/202 (36.14%), Postives = 98/202 (48.51%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALD--HMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQKPF 601
            + V +++Y  YGHVE LA+ + +          +  RVPET+     +  H KV   D   P  +  DL   D  + G PTR+G +++QM AF D  G LW  G L GK  G F S            ++ I  L H GM  V + Y+   G   +D I GGSPYGA   A G G R+PS  EL    HQG+ +A  + K F
Sbjct:    2 SKVLVLYYSTYGHVEALAEAVAEGARATGATVDVK-RVPETVPAAVAEASHFKV---DQKAPVATVEDLANYDAIVVGTPTRFGRISSQMAAFLDQAGGLWMRGVLNGKVGGAFTSTATQHGGQEATLFSIIANLLHFGMTIVGLPYSH-QGQMTLDEIVGGSPYGATTIAGGQGQRQPSAIELEGARHQGELIAKTANKLF 198          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_PARDP (Flavoprotein wrbA OS=Paracoccus denitrificans (strain Pd 1222) GN=wrbA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.862e-24
Identity = 72/193 (37.31%), Postives = 96/193 (49.74%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAGD---GTRKPSETELGLPEHQGKFLA 580
            V +++Y  YGHVE +A  + +          +  RVPE L  EA+       +D   P  +  +L + D  + G PTR+G MA+QMK F D TG LW E +LVGK    F S             +  T L H GM+ V + Y+F  G  +MD I GGSPYGA   A D   G R+PS  EL     QG+ +A
Sbjct:    4 VLVLYYSSYGHVETMAAAVAQGAREAGARVAVR-RVPE-LVPEAVAERAGYKQDQRAPVATVGELADYDAIIIGTPTRFGNMASQMKNFLDQTGGLWAEDRLVGKVGSVFTSTGSQHGGQETTIQSTHTVLLHLGMIVVGLPYSF-KGQMRMDEITGGSPYGASTLADDGDGGDRQPSANELDGARFQGRHVA 193          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_MARMS (Flavoprotein wrbA OS=Marinomonas sp. (strain MWYL1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.862e-24
Identity = 69/191 (36.13%), Postives = 98/191 (51.31%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLA 580
            V +++Y  YGH+E +A  + +          +  RVPE +  +   +  V   D D P     DLV  D  +FG PTR+G MA+QM+ F D TG LW +GKLVGK    F S             +  T L HHG + V + Y+    +  +  ++GGSP GAG  AG DG+R PS+ E+ +   QGK +A
Sbjct:    4 VLVLYYSSYGHIEAMANEIAQGARSTGAQVDIK-RVPELMPEDVAKNSGVK-LDQDAPVAKPDDLVNYDAVIFGSPTRFGNMASQMRNFLDMTGGLWAQGKLVGKIGSVFTSTGTGGGNETTIQ-SFHTTLFHHGFVVVGLPYSC-PELADISEVKGGSPLGAGTIAGADGSRMPSDKEIAMARFQGKHVA 190          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA2_RHIME (Flavoprotein wrbA 2 OS=Rhizobium meliloti GN=wrbA2 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.431e-24
Identity = 70/193 (36.27%), Postives = 101/193 (52.33%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALD--HMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLA 580
            V +++Y  YGH+E +A  + +        E  + RVPET+  E  D  H K+   +   P  + A+L + D  + G  TR+G M++QM  F D  G LW  G L GK  G FVS            ++ IT L H GM+ V + Y+   G   +D I GG+PYGA   AG DG+R+PS+ +L    HQG+ +A
Sbjct:    4 VLVLYYSSYGHIETMAGAVAEGARSTGA-EVTIKRVPETVPIEVADKAHFKL---NQAAPVATVAELADYDAIIVGTGTRFGRMSSQMAVFLDQAGGLWARGALNGKVGGAFVSTGTQHGGQETTLFSIITNLMHFGMVIVGLPYSH-QGQMSVDEIVGGAPYGATTVAGGDGSRQPSQIDLAGAFHQGEIVA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_METSB (Flavoprotein wrbA OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=wrbA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.175e-24
Identity = 72/195 (36.92%), Postives = 101/195 (51.79%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALD--HMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGA-GVFAGDGTRKPSETELGLPEHQGKFLA 580
            A V +++Y  YGH+E +A+ + +        E  + RVPE +  E     H K+   D   P  + ADL   D  + G  TR+G M++QM  F D  G LW  G L GK    F S            ++ IT L H G++ V + Y F AG  ++D I GGSPYGA  + A DG+R+PSETEL    +QG+ +A
Sbjct:    2 AKVLVLYYSAYGHIEKMAEAVAEGAREAGA-EVDIKRVPELVPLEIAQKSHFKL---DQAAPVATIADLEHYDAIIVGTGTRFGRMSSQMANFLDQAGGLWMRGALNGKVGAAFTSTATQHGGQEVTLFSIITNLLHFGLVIVGLDYGF-AGQGRLDEITGGSPYGATTIAASDGSRQPSETELAGARYQGRRVA 191          
The following BLAST results are available for this feature:
BLAST of EY675585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA1_RHIME8.356e-2534.87Flavoprotein wrbA 1 OS=Rhizobium meliloti GN=wrbA1... [more]
WRBA_BURP81.091e-2436.00Flavoprotein wrbA OS=Burkholderia phymatum (strain... [more]
WRBA_RHOP51.425e-2436.41Flavoprotein wrbA OS=Rhodopseudomonas palustris (s... [more]
WRBA_BRASB1.425e-2435.86Flavoprotein wrbA OS=Bradyrhizobium sp. (strain BT... [more]
WRBA_AGRT51.425e-2436.27Flavoprotein wrbA OS=Agrobacterium tumefaciens (st... [more]
WRBA_RALME1.862e-2436.14Flavoprotein wrbA OS=Ralstonia metallidurans (stra... [more]
WRBA_PARDP1.862e-2437.31Flavoprotein wrbA OS=Paracoccus denitrificans (str... [more]
WRBA_MARMS1.862e-2436.13Flavoprotein wrbA OS=Marinomonas sp. (strain MWYL1... [more]
WRBA2_RHIME2.431e-2436.27Flavoprotein wrbA 2 OS=Rhizobium meliloti GN=wrbA2... [more]
WRBA_METSB3.175e-2436.92Flavoprotein wrbA OS=Methylocella silvestris (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-E08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675585 ID=EY675585; Name=EY675585; organism=Citrus sinensis; type=EST; length=1023bp
CCACGCGTCCGTATTCATCGTGTTCTACCCCATGTATGGCCACGTGGAGG
GGTTGGCAAAGAGGATGACCAAGGGCGTTGATGGCGTTGACGGTGTGGAG
GGCCTGCTGTATCGGGTGCCCGAGACGTTGACGAGGGAGGCCTTGGACCA
CATGAAAGTGCCGCCGAGAGATGATGACATCCCGGAGATTTCGGCGGCGG
ATTTAGTGGAGGCTGACGGGTTCTTGTTTGGGTTTCCGACGAGGTATGGG
TGCATGGCGGCCCAAATGAAGGCTTTTTTCGACTCGACTGGCATGTTGTG
GAAAGAGGGTAAACTTGTCGGTAAACCCGCCGGTTTTTTTGTCAGCACTG
GCACTCAAGGTGGCGGTCAGGAAACCACTGCTTGGACTGCAATTACCCAG
TTGGCCCACCATGGAATGCTATTTGTTCCTATTGGGTACACCTTTGGAGC
CGGTATGTTCAAGATGGACTCTATTCGGGGAGGCTCTCCATATGGTGCTG
GTGTTTTCGCTGGTGATGGCACCAGAAAGCCAAGTGAAACAGAACTGGGA
CTACCAGAACATCAGGGCAAGTTTTTGGCAGCCGGTAGTCAAAAACCTTT
TCGAGGCTTTATCTTTTTAGGTCTTTCTTCCAACCCCCTCTCTTGTGGTT
GGAGTTTGGGTTTGCTTTTGTGATGAATTTTGGGGTTTTATGGGGTTGCC
GGCCACCCATTCCTTTTCTTCTTTTTTTTTTTCCCCAAAATTTCCTTTCC
TGGTTGAAAAAGGTGGTAAATGGAAATGGAAAATTTCTTTTCCCTTTTTT
GGCCCCCCCCACAATTAAAATTTTGGGTGAGAACCACCCGAGGAGATGGT
TTTCTTTTTGTAAAAACTTTTTTTTTTTTCTTTAACACGGTGGGGAAATT
TTTTATCAAGTTAATTATTTTTTTTAAGTGGGTGAAAAAAAATTTTTTCT
TTTAGTCGTTGGGGTGCGCCGAAAAAAGACAAAAAAAAAAAAAATAAATA
AAAAAAGAACATAAAAAAATAAC
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