EY675585

Overview
NameEY675585
Unique NameEY675585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_METBF (Flavoprotein wrbA OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=wrbA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.821e-23
Identity = 69/203 (33.99%), Postives = 100/203 (49.26%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDD---DIPEISAADLVE----ADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLAAGSQK 595
            V ++F+ ++GH   +A+ + +        E  +Y+VPETL  E L+ M      +    IP ++ +   +    AD  +FG PTRYG M AQM+  FD  G LW    LVGK    F S             T    L H GM+ V + Y+      +MD I GGSPYGA   AG +  R+PSE EL +  +QG+ +   ++K
Sbjct:    4 VNVIFHSIHGHTYKMAEAIAEGAREVEGAEVEIYQVPETLPYEVLEKMGAIETKNLFAHIPVVTRSMYEDVFAGADALIFGTPTRYGNMTAQMRTVFDGLGGLWSRDALVGKVGSVFTSSGTQHGGQESTILTTHVTLLHLGMIIVGLPYS-ETRQRRMDEITGGSPYGASTIAGAEENRQPSENELAMARYQGRHVTQIAKK 205          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_BRUMB (Flavoprotein wrbA OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=wrbA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.821e-23
Identity = 68/193 (35.23%), Postives = 96/193 (49.74%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLA 580
            + +++Y  YG++E +AK   +        E  L RVPE +  E     H K+   D + P  +  +L + D  + G  TRYG MA+QMK F D TG LW +G L+ K     VS             +   Q+ HHGM+ VP+ Y     M   D +RGG+PYG    A GDG+R+PS  EL     QG+ +A
Sbjct:    4 MLVLYYSAYGYMEQMAKAAAEGAREGGA-EVTLKRVPELVPEEVAKASHYKI---DQEAPIATPGELADYDAIIIGTATRYGMMASQMKNFLDQTGGLWAKGALINKVGSVMVSTATQHGGAELALISTQWQMQHHGMIIVPLSYACREQMGN-DVVRGGAPYGMTTTADGDGSRQPSAQELDGARFQGRRVA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_METMA (Flavoprotein wrbA OS=Methanosarcina mazei GN=wrbA PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.881e-22
Identity = 71/210 (33.81%), Postives = 100/210 (47.62%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALD------------HMKVPPRD--DDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQK 595
            V I+F+ ++ H+  +A+ +          E  +Y+VPETL  + L+            H+ V  RD  +D+       L  AD  +FG PTRYG M AQM+A  D  G LW E   VGK    F S             +    L H GM+ V + Y        M+ I GGSPYGA   A GDG+R+PSE EL +  +QG+ +   ++K
Sbjct:    4 VNIIFHSVHAHIYRMAEAVAAGAREVEGAEVGIYQVPETLPEDVLEKMGAIETKKLFAHIPVVTRDMYEDV-------LAGADALIFGTPTRYGMMTAQMRAVLDGLGKLWSEDAFVGKVGSVFTSSGTQHGGQESTILSFHVTLLHLGMVIVGLPYAEKRQTI-MNEITGGSPYGASTIAGGDGSRQPSENELEMARYQGRHVTQIAKK 205          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_RHOP2 (Flavoprotein wrbA OS=Rhodopseudomonas palustris (strain HaA2) GN=wrbA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.926e-21
Identity = 67/195 (34.36%), Postives = 93/195 (47.69%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLA 580
            A V +++Y  YGH+E +A  + +          +  RVPE +  +     + K+   D   P  +  DL   D  + G  TR+G MA+QM  F D  G LW +G L GK  G F S            ++ IT L H GM+ V + Y F  G   +  I GG+PYGA    G DG R+PS  EL    +QGK +A
Sbjct:    2 AKVLVLYYSAYGHIETMANAVAEGAREAGATVDIK-RVPELVPPDVAKASYYKL---DQAAPVATIDDLANYDAIIVGTGTRFGRMASQMANFLDQAGGLWAKGALNGKVGGAFTSTATQHGGQETTLFSIITNLLHFGMVVVGLNYGF-QGQMTLGEITGGAPYGATTLTGGDGARQPSANELAGARYQGKTIA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_RHIL3 (Flavoprotein wrbA OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=wrbA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.516e-21
Identity = 66/195 (33.85%), Postives = 96/195 (49.23%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLA 580
            A V +++Y  YGH+E +A  + +        E  + RVPE +  +     + KV   D   P  +  +L + D  + G  TR+G +A+QM+ F+D TG LW  GKLVGK    F S               I    H GM+   + Y F  G    + ++GGSPYGA     GDG+R+PSE EL   ++QG  +A
Sbjct:    2 AKVLVLYYSAYGHIETMAYAVAEGAKSAGA-EVTVKRVPELVPEDVAKASYYKV---DQAAPIATVDELADYDAIIVGAGTRFGTVASQMRNFWDQTGGLWFAGKLVGKLGSVFTSSATQHGGQESTILGFIPTFLHQGMVVAGLPYAF-QGQMGTEEVKGGSPYGASTITNGDGSRQPSEIELEGAKYQGAHVA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: RFS1_YEAST (Protein RFS1 OS=Saccharomyces cerevisiae GN=RFS1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.759e-17
Identity = 61/170 (35.88%), Postives = 90/170 (52.94%), Query Frame = 2
Query:   98 EGLLYRVP------ETLTREALDHMKVPPRDDDIPE--ISAADLVEADGFLFGFPTRYGCMAAQMKAFFDS-TGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXA-WTAITQLAHHGMLFVPIGYTFG-AGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGK 571
            E  +++VP      E  T E  +  KV   + D     ++   LVE D +LFG PT++G   A+ K+F+DS TG LW +G L GK AG FVS               A++ L HHG+++VP+GY      +  ++ + G   +GAG  +G DG R PS +EL + + QGK
Sbjct:   32 EAEIFQVPDVSYKTEYATEEGKEAAKVAKTNADFSYKILTRETLVEYDYYLFGIPTKFGNFPAEWKSFWDSNTGGLWAKGSLHGKIAGLFVSGAISGKGDTEMCIMNAMSTLVHHGVIYVPLGYKNAYKELTDVEDVNGSCAWGAGCVSGIDGGRPPSLSELRVHQLQGK 201          
The following BLAST results are available for this feature:
BLAST of EY675585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_METBF7.821e-2333.99Flavoprotein wrbA OS=Methanosarcina barkeri (strai... [more]
WRBA_BRUMB7.821e-2335.23Flavoprotein wrbA OS=Brucella melitensis biotype 2... [more]
WRBA_METMA3.881e-2233.81Flavoprotein wrbA OS=Methanosarcina mazei GN=wrbA ... [more]
WRBA_RHOP21.926e-2134.36Flavoprotein wrbA OS=Rhodopseudomonas palustris (s... [more]
WRBA_RHIL32.516e-2133.85Flavoprotein wrbA OS=Rhizobium leguminosarum bv. v... [more]
RFS1_YEAST3.759e-1735.88Protein RFS1 OS=Saccharomyces cerevisiae GN=RFS1 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-E08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675585 ID=EY675585; Name=EY675585; organism=Citrus sinensis; type=EST; length=1023bp
CCACGCGTCCGTATTCATCGTGTTCTACCCCATGTATGGCCACGTGGAGG
GGTTGGCAAAGAGGATGACCAAGGGCGTTGATGGCGTTGACGGTGTGGAG
GGCCTGCTGTATCGGGTGCCCGAGACGTTGACGAGGGAGGCCTTGGACCA
CATGAAAGTGCCGCCGAGAGATGATGACATCCCGGAGATTTCGGCGGCGG
ATTTAGTGGAGGCTGACGGGTTCTTGTTTGGGTTTCCGACGAGGTATGGG
TGCATGGCGGCCCAAATGAAGGCTTTTTTCGACTCGACTGGCATGTTGTG
GAAAGAGGGTAAACTTGTCGGTAAACCCGCCGGTTTTTTTGTCAGCACTG
GCACTCAAGGTGGCGGTCAGGAAACCACTGCTTGGACTGCAATTACCCAG
TTGGCCCACCATGGAATGCTATTTGTTCCTATTGGGTACACCTTTGGAGC
CGGTATGTTCAAGATGGACTCTATTCGGGGAGGCTCTCCATATGGTGCTG
GTGTTTTCGCTGGTGATGGCACCAGAAAGCCAAGTGAAACAGAACTGGGA
CTACCAGAACATCAGGGCAAGTTTTTGGCAGCCGGTAGTCAAAAACCTTT
TCGAGGCTTTATCTTTTTAGGTCTTTCTTCCAACCCCCTCTCTTGTGGTT
GGAGTTTGGGTTTGCTTTTGTGATGAATTTTGGGGTTTTATGGGGTTGCC
GGCCACCCATTCCTTTTCTTCTTTTTTTTTTTCCCCAAAATTTCCTTTCC
TGGTTGAAAAAGGTGGTAAATGGAAATGGAAAATTTCTTTTCCCTTTTTT
GGCCCCCCCCACAATTAAAATTTTGGGTGAGAACCACCCGAGGAGATGGT
TTTCTTTTTGTAAAAACTTTTTTTTTTTTCTTTAACACGGTGGGGAAATT
TTTTATCAAGTTAATTATTTTTTTTAAGTGGGTGAAAAAAAATTTTTTCT
TTTAGTCGTTGGGGTGCGCCGAAAAAAGACAAAAAAAAAAAAAATAAATA
AAAAAAGAACATAAAAAAATAAC
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