EY675585

Overview
NameEY675585
Unique NameEY675585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_BURCJ (Flavoprotein wrbA OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=wrbA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.282e-29
Identity = 75/198 (37.88%), Postives = 105/198 (53.03%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLAAGSQK 595
            A V +++Y  YGHVE +A+ + +        E  L RVPET+  +    + V   D   P  +  +L + D  +FG PTR+G MA QM+ F D TG LW +G LVGK    F S             +  T L HHGM+ V + Y   +G+  M+ I GG+PYGA   AG DG+R+PS  EL +  +QGK +A  + K
Sbjct:    2 AKVLVLYYSSYGHVETMAQHIVEGAKSVPGVEVTLKRVPETIPVDQARAIGVKV-DQAAPVATVDELADYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVNMNEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELANK 197          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_BURCC (Flavoprotein wrbA OS=Burkholderia cenocepacia (strain MC0-3) GN=wrbA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.282e-29
Identity = 75/198 (37.88%), Postives = 105/198 (53.03%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLAAGSQK 595
            A V +++Y  YGHVE +A+ + +        E  L RVPET+  +    + V   D   P  +  +L + D  +FG PTR+G MA QM+ F D TG LW +G LVGK    F S             +  T L HHGM+ V + Y   +G+  M+ I GG+PYGA   AG DG+R+PS  EL +  +QGK +A  + K
Sbjct:    2 AKVLVLYYSSYGHVETMAQHIVEGAKSVPGVEVTLKRVPETIPVDQARAIGVKV-DQAAPVATVDELADYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVNMNEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELASK 197          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_BURCH (Flavoprotein wrbA OS=Burkholderia cenocepacia (strain HI2424) GN=wrbA PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.592e-29
Identity = 75/198 (37.88%), Postives = 104/198 (52.53%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLAAGSQK 595
            A V +++Y  YGHVE +A+ + +        E  L RVPET+  +    + V   D   P  +  +L + D  +FG PTR+G MA QM+ F D TG LW +G LVGK    F S             +  T L HHGM+ V + Y   +G+  M  I GG+PYGA   AG DG+R+PS  EL +  +QGK +A  + K
Sbjct:    2 AKVLVLYYSSYGHVETMAQHIVEGAKSVPGVEVTLKRVPETIPVDQARAIGVKV-DQAAPVATVDELADYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVNMSEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELASK 197          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_TOLAT (Flavoprotein wrbA OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=wrbA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 7.303e-29
Identity = 79/198 (39.90%), Postives = 106/198 (53.54%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETL--TREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQK 595
            V ++++ MYGH+E +A  + +        E  + RVPET+   R A    K    +   P  + A+LV+ D  +FG PTR+G M AQM+ F D TG LW +G L GK A  F S             T  T LAHHGM+ VPIGY   A MF +  + GG+PYGA   A GDG+R+P   EL +   QGK +A  + K
Sbjct:    4 VLVLYHSMYGHIETMANSIAEGAREVSGVEVTIKRVPETMDPARFAAAGGKT---EQSAPVATPAELVDYDAIIFGVPTRFGNMTAQMRNFLDQTGGLWAKGALFGKIASVFASTGVGGGQEMTITST-WTTLAHHGMVIVPIGYG-TAEMFDISHVGGGTPYGATTLAGGDGSRQPDARELAIARFQGKHVATVAAK 196          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_HALHL (Flavoprotein wrbA OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 7.303e-29
Identity = 78/202 (38.61%), Postives = 110/202 (54.46%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQ----LAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQK 595
            + V +++Y MYGHVE LA+ + +        E ++ RVPET+  E +        D + P  S  +L + D  LFG PTR+G MA QM+ F D TG LW  G+L+GK    F S             T IT     LAHHGM+ V + Y     +  +  ++GGSPYGAG  A GDG+R+P+E EL L  +QG+ +A  +Q+
Sbjct:    2 SKVLVLYYSMYGHVETLAQAVAEGARGAGS-EVVIKRVPETMP-EDVARQAGAKLDQEAPVASLEELADYDAILFGTPTRFGNMAGQMRNFLDQTGSLWFNGQLIGKVGSVFTSTGTGGGNE-----TTITSFWHTLAHHGMVIVGLSYA-APELADLSVVKGGSPYGAGTIAGGDGSRQPNEQELALARYQGRHVAEIAQR 195          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_GEOLS (Flavoprotein wrbA OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=wrbA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 7.303e-29
Identity = 76/196 (38.78%), Postives = 99/196 (50.51%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDD---DIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLA 580
            + + IVFY MYGH+  +A+ +             L +VPE ++ E L+             IP  +   L EAD  +FG PTR+G MAAQM+ F D TG LW  G LVGK    F S             +  + L HHGM+ V + YT    +  MD I GGSPYGA   A GDG+R+PSE EL +   QG  +A
Sbjct:    2 SKIQIVFYSMYGHIHTMAEAVADGVRSVGGCSAELLQVPELISEEVLEKYGAKAARAAFAHIPTATVERLAEADAIIFGTPTRFGNMAAQMRNFLDQTGKLWLSGGLVGKVGSVFASTATQHGGQETTITSFHSTLLHHGMIIVGVPYT-EQRLLTMDEISGGSPYGATTLAGGDGSRRPSENELAIARFQGAHVA 196          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_BURS3 (Flavoprotein wrbA OS=Burkholderia sp. (strain 383) GN=wrbA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 7.303e-29
Identity = 75/198 (37.88%), Postives = 105/198 (53.03%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLAAGSQK 595
            A V +++Y  YGHVE +A+ + +        E  L RVPET+  +    + V   D   P  +  +L + D  +FG PTR+G MA QM+ F D TG LW +G LVGK    F S             +  T L HHGM+ V + Y   +G+  M+ I GG+PYGA   AG DG+R+PS  EL +  +QGK +A  + K
Sbjct:    2 AKVLVLYYSSYGHVETMAQHIAEGAKSVAGVEVTLKRVPETIPVDQARAIGVKV-DQAAPVATVDELADYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVNMNEITGGTPYGATTLAGADGSRQPSANELDIARYQGKRVAELASK 197          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_BURCA (Flavoprotein wrbA OS=Burkholderia cenocepacia (strain AU 1054) GN=wrbA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 7.303e-29
Identity = 74/198 (37.37%), Postives = 104/198 (52.53%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLAAGSQK 595
            A V +++Y  YGH+E +A+ + +        E  L RVPET+  +    + V   D   P  +  +L + D  +FG PTR+G MA QM+ F D TG LW +G LVGK    F S             +  T L HHGM+ V + Y   +G+  M  I GG+PYGA   AG DG+R+PS  EL +  +QGK +A  + K
Sbjct:    2 AKVLVLYYSSYGHIETMAQHIVEGAKSVPGVEVTLKRVPETIPVDQARAIGVKV-DQAAPVATVDELADYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVNMSEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELASK 197          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_YERPY (Flavoprotein wrbA OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=wrbA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 9.538e-29
Identity = 74/193 (38.34%), Postives = 101/193 (52.33%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLA 580
            A + +++Y MYGH+E LA  + +        +  + RVPET+  EA         +   P  +  +L + DG +FG PTR+G M+ QM+ F D TG LW  G L GK A  F S             T  T LAHHG + VPIGY     +F +   RGG+PYGA   A GDG+R+PS  EL +   QG+ +A
Sbjct:    2 AKILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAG-GKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_YERPS (Flavoprotein wrbA OS=Yersinia pseudotuberculosis GN=wrbA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 9.538e-29
Identity = 74/193 (38.34%), Postives = 101/193 (52.33%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLA 580
            A + +++Y MYGH+E LA  + +        +  + RVPET+  EA         +   P  +  +L + DG +FG PTR+G M+ QM+ F D TG LW  G L GK A  F S             T  T LAHHG + VPIGY     +F +   RGG+PYGA   A GDG+R+PS  EL +   QG+ +A
Sbjct:    2 AKILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAG-GKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVA 191          
The following BLAST results are available for this feature:
BLAST of EY675585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_BURCJ4.282e-2937.88Flavoprotein wrbA OS=Burkholderia cepacia (strain ... [more]
WRBA_BURCC4.282e-2937.88Flavoprotein wrbA OS=Burkholderia cenocepacia (str... [more]
WRBA_BURCH5.592e-2937.88Flavoprotein wrbA OS=Burkholderia cenocepacia (str... [more]
WRBA_TOLAT7.303e-2939.90Flavoprotein wrbA OS=Tolumonas auensis (strain DSM... [more]
WRBA_HALHL7.303e-2938.61Flavoprotein wrbA OS=Halorhodospira halophila (str... [more]
WRBA_GEOLS7.303e-2938.78Flavoprotein wrbA OS=Geobacter lovleyi (strain ATC... [more]
WRBA_BURS37.303e-2937.88Flavoprotein wrbA OS=Burkholderia sp. (strain 383)... [more]
WRBA_BURCA7.303e-2937.37Flavoprotein wrbA OS=Burkholderia cenocepacia (str... [more]
WRBA_YERPY9.538e-2938.34Flavoprotein wrbA OS=Yersinia pseudotuberculosis s... [more]
WRBA_YERPS9.538e-2938.34Flavoprotein wrbA OS=Yersinia pseudotuberculosis G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-E08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675585 ID=EY675585; Name=EY675585; organism=Citrus sinensis; type=EST; length=1023bp
CCACGCGTCCGTATTCATCGTGTTCTACCCCATGTATGGCCACGTGGAGG
GGTTGGCAAAGAGGATGACCAAGGGCGTTGATGGCGTTGACGGTGTGGAG
GGCCTGCTGTATCGGGTGCCCGAGACGTTGACGAGGGAGGCCTTGGACCA
CATGAAAGTGCCGCCGAGAGATGATGACATCCCGGAGATTTCGGCGGCGG
ATTTAGTGGAGGCTGACGGGTTCTTGTTTGGGTTTCCGACGAGGTATGGG
TGCATGGCGGCCCAAATGAAGGCTTTTTTCGACTCGACTGGCATGTTGTG
GAAAGAGGGTAAACTTGTCGGTAAACCCGCCGGTTTTTTTGTCAGCACTG
GCACTCAAGGTGGCGGTCAGGAAACCACTGCTTGGACTGCAATTACCCAG
TTGGCCCACCATGGAATGCTATTTGTTCCTATTGGGTACACCTTTGGAGC
CGGTATGTTCAAGATGGACTCTATTCGGGGAGGCTCTCCATATGGTGCTG
GTGTTTTCGCTGGTGATGGCACCAGAAAGCCAAGTGAAACAGAACTGGGA
CTACCAGAACATCAGGGCAAGTTTTTGGCAGCCGGTAGTCAAAAACCTTT
TCGAGGCTTTATCTTTTTAGGTCTTTCTTCCAACCCCCTCTCTTGTGGTT
GGAGTTTGGGTTTGCTTTTGTGATGAATTTTGGGGTTTTATGGGGTTGCC
GGCCACCCATTCCTTTTCTTCTTTTTTTTTTTCCCCAAAATTTCCTTTCC
TGGTTGAAAAAGGTGGTAAATGGAAATGGAAAATTTCTTTTCCCTTTTTT
GGCCCCCCCCACAATTAAAATTTTGGGTGAGAACCACCCGAGGAGATGGT
TTTCTTTTTGTAAAAACTTTTTTTTTTTTCTTTAACACGGTGGGGAAATT
TTTTATCAAGTTAATTATTTTTTTTAAGTGGGTGAAAAAAAATTTTTTCT
TTTAGTCGTTGGGGTGCGCCGAAAAAAGACAAAAAAAAAAAAAATAAATA
AAAAAAGAACATAAAAAAATAAC
back to top