EY675585

Overview
NameEY675585
Unique NameEY675585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_BURA4 (Flavoprotein wrbA OS=Burkholderia ambifaria (strain MC40-6) GN=wrbA PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.734e-28
Identity = 73/193 (37.82%), Postives = 100/193 (51.81%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLA 580
            A V +++Y  YGHVE +A+ + +        E  L RVPET+  +    + V   D   P  +  +L   D  +FG PTR+G MA QM+ F D TG LW +G LVGK    F S             +  T L H GM+ V + Y   +G+  M  I GG+PYGA   AG DG+R+PS  EL +  +QGK +A
Sbjct:    2 AKVLVLYYSSYGHVETMAQHVAEGAKSVPGVEVTLKRVPETIPADQAKAIGVKV-DQAAPVATVDELPNYDAIIFGTPTRFGNMAGQMRTFLDQTGCLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHQGMVIVGVPYAC-SGLVNMSEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVA 192          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_AZOSE (Flavoprotein wrbA OS=Azoarcus sp. (strain EbN1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 6.183e-28
Identity = 77/203 (37.93%), Postives = 102/203 (50.25%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDD---DIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQKPFRG 607
            V I+FY MYGH+  +A+ + +        E  L+RVPE +  E L+             +P      L EAD  +FG PTR+G M AQM+ F D TG LW +G LVGK    F S             +    L H GM+ V + YT    M  MD I GGSPYGA   A GDG+R PS+TE+ + + QG+ +A  +    RG
Sbjct:    3 VQIIFYSMYGHIFRMAEAVAEGARSVAGAEVGLFRVPELVPDEVLEKSGAKTAQQAFAHVPVAKTEQLPEADAIIFGTPTRFGNMCAQMRNFLDQTGGLWMKGSLVGKVGSVFTSTATQHGGQESTILSTHITLLHQGMVLVGLPYTEKRQM-GMDEILGGSPYGAATIAGGDGSRMPSQTEIEMAKFQGRHVAEIASALVRG 204          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_RHOCS (Flavoprotein wrbA OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=wrbA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.075e-28
Identity = 70/198 (35.35%), Postives = 107/198 (54.04%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDH--MKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQK 595
            V +++Y  YGH+E +A+ + +        E  + RVPE +  E   +  MK+   D   P  + A+L E D  + G PTR+G M +QM  F D TG LW +G L GK    F S            ++ +T L HHGM+ V + Y++  G+  ++ ++GG+PYGA   A GDG+R+P+E ELG   +QG  +A  + K
Sbjct:    4 VLVLYYSSYGHIETMAQAVAEGARSVPGTEVAVKRVPELVPEEVARNAGMKL---DQPAPVATVAELAEYDAIIVGSPTRFGRMTSQMANFLDQTGGLWAKGALNGKVGAAFTSTASQHGGQETTLFSILTNLLHHGMVVVGLPYSY-EGLSGVEQVKGGTPYGASTIADGDGSRRPTEVELGGARYQGALVARTAAK 197          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_METEP (Flavoprotein wrbA OS=Methylobacterium extorquens (strain PA1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.075e-28
Identity = 78/200 (39.00%), Postives = 107/200 (53.50%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALD--HMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQK 595
            A V +++Y  +GHVE +AK + +        E  L RVPE +  E     H K+   D + P  +  +L + D  +FG PTRYG MA+QMK F D TG LW +G LVGK    F S             +  T L HHGM+ V + Y+F AG   ++ ++G SPYGA   A GDG+R+PSE EL     QG+ +A  + K
Sbjct:    2 AKVLVLYYSSWGHVEQMAKAVAEGARETGA-EVALKRVPELVPDEVAKQFHYKL---DQEAPIATVEELADYDAIIFGTPTRYGNMASQMKQFIDQTGGLWAKGALVGKVGSAFTSTASQHGGQETTLTSFHTVLFHHGMVVVGLPYSF-AGQNGVEQVKGNSPYGATTIADGDGSRQPSEVELDGARFQGRHVAGIAAK 196          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_METC4 (Flavoprotein wrbA OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=wrbA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.075e-28
Identity = 78/200 (39.00%), Postives = 107/200 (53.50%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALD--HMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQK 595
            A V +++Y  +GHVE +AK + +        E  L RVPE +  E     H K+   D + P  +  +L + D  +FG PTRYG MA+QMK F D TG LW +G LVGK    F S             +  T L HHGM+ V + Y+F AG   ++ ++G SPYGA   A GDG+R+PSE EL     QG+ +A  + K
Sbjct:    2 AKVLVLYYSSWGHVEQMAKAVAEGARETGA-EVALKRVPELVPDEVAKQFHYKL---DQEAPIATVEELADYDAIIFGTPTRYGNMASQMKQFIDQTGGLWAKGALVGKVGSAFTSTASQHGGQETTLTSFHTVLFHHGMVVVGLPYSF-AGQNGVEQVKGNSPYGATTIADGDGSRQPSEVELDGARFQGRHVAGIAAK 196          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_CAUCR (Flavoprotein wrbA OS=Caulobacter crescentus GN=wrbA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.075e-28
Identity = 77/195 (39.49%), Postives = 102/195 (52.31%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALD--HMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLA 580
            A V +++Y  YGH+E +AK + +          +  RVPET+  E     H K+   D D P     DL + D  + G PTR+G MA+QM AFFD+ G LW  G L GK AG F S            ++ IT + H G   V + Y   AG   +D I GGSPYGA   AG DG+R+PSE EL    +QG+ +A
Sbjct:    2 AKVLVLYYSSYGHLEVMAKAIAEGAREAGASVDIK-RVPETVPLEIAKGAHFKL---DQDAPVAKVEDLADYDAIIVGAPTRFGRMASQMAAFFDAAGGLWARGALHGKVAGAFTSTATQHGGQETTLFSIITNMLHFGTTIVGLDYGH-AGQMTLDEITGGSPYGATTIAGGDGSRQPSENELTGARYQGRKIA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_CAUCN (Flavoprotein wrbA OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=wrbA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.075e-28
Identity = 77/195 (39.49%), Postives = 102/195 (52.31%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALD--HMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLA 580
            A V +++Y  YGH+E +AK + +          +  RVPET+  E     H K+   D D P     DL + D  + G PTR+G MA+QM AFFD+ G LW  G L GK AG F S            ++ IT + H G   V + Y   AG   +D I GGSPYGA   AG DG+R+PSE EL    +QG+ +A
Sbjct:    2 AKVLVLYYSSYGHLEVMAKAIAEGAREAGASVDIK-RVPETVPLEIAKGAHFKL---DQDAPVAKVEDLADYDAIIVGAPTRFGRMASQMAAFFDAAGGLWARGALHGKVAGAFTSTATQHGGQETTLFSIITNMLHFGTTIVGLDYGH-AGQMTLDEITGGSPYGATTIAGGDGSRQPSENELTGARYQGRKIA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_BURCM (Flavoprotein wrbA OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=wrbA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.075e-28
Identity = 73/193 (37.82%), Postives = 100/193 (51.81%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLA 580
            A V +++Y  YGHVE +A+ + +        E  L RVPET+  +    + V   D   P  +  +L   D  +FG PTR+G MA QM+ F D TG LW +G LVGK    F S             +  T L H GM+ V + Y   +G+  M  I GG+PYGA   AG DG+R+PS  EL +  +QGK +A
Sbjct:    2 AKVLVLYYSSYGHVETMAQHIAEGAKSVPGVEVTLKRVPETIPADQAKAIGVKV-DQAAPVATVDELPNYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHQGMVIVGVPYAC-SGLVNMSEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVA 192          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_THICR (Flavoprotein wrbA OS=Thiomicrospira crunogena (strain XCL-2) GN=wrbA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.055e-27
Identity = 73/196 (37.24%), Postives = 104/196 (53.06%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQK 595
            V +++Y MYGHVE +AK + +        E  + RVPE +T E      V   D   P  + ++L + D  +FG PTR+G M AQM+ F D TG LW  GKL+ K    F S             +  T L H+GM+ V + Y+    M  M+ I GG+PYGA   A GDG+R+PSE E+ + + QG  +A  ++K
Sbjct:    4 VLVLYYSMYGHVETMAKAIAEGAGSVEGVEVTIKRVPELMTDEQAKKAGVK-LDQSAPIATPSELADYDAIIFGTPTRFGNMCAQMRNFLDQTGGLWAGGKLINKVGSVFTSTGTQHGGQETTITSFHTNLFHYGMIVVGVPYSC-QEMTNMNEITGGTPYGASTLAGGDGSRQPSENEIKIAKCQGVHVAKVAKK 197          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_ACICJ (Flavoprotein wrbA OS=Acidiphilium cryptum (strain JF-5) GN=wrbA PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.799e-27
Identity = 75/200 (37.50%), Postives = 104/200 (52.00%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALD--HMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLAAGSQK 595
            A V +++Y  +GHVE +AK + +        E  L RVPET+  +     H K    D D P  + A+L + D  +FG PTR+G M  QM+ F D TG LW +G L+GK    F S             +  T L HHGM+ V + Y+    +  M+ I GG+PYGA   AG DG+R+PS  EL +   QGK +A  + K
Sbjct:    2 AKVLVLYYSTWGHVETMAKAVAEGAKAAGA-EVTLKRVPETMPEDTAKAIHAKT---DQDAPVATPAELADYDAIIFGTPTRFGNMCGQMRNFLDQTGGLWAKGALIGKVGSVFASTGTQHGGQETTITSFHTTLFHHGMIVVGVPYS-NPELTNMNEITGGTPYGATTLAGADGSRQPSANELAIARAQGKHVAGIAAK 196          
The following BLAST results are available for this feature:
BLAST of EY675585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_BURA44.734e-2837.82Flavoprotein wrbA OS=Burkholderia ambifaria (strai... [more]
WRBA_AZOSE6.183e-2837.93Flavoprotein wrbA OS=Azoarcus sp. (strain EbN1) GN... [more]
WRBA_RHOCS8.075e-2835.35Flavoprotein wrbA OS=Rhodospirillum centenum (stra... [more]
WRBA_METEP8.075e-2839.00Flavoprotein wrbA OS=Methylobacterium extorquens (... [more]
WRBA_METC48.075e-2839.00Flavoprotein wrbA OS=Methylobacterium chloromethan... [more]
WRBA_CAUCR8.075e-2839.49Flavoprotein wrbA OS=Caulobacter crescentus GN=wrb... [more]
WRBA_CAUCN8.075e-2839.49Flavoprotein wrbA OS=Caulobacter crescentus (strai... [more]
WRBA_BURCM8.075e-2837.82Flavoprotein wrbA OS=Burkholderia ambifaria (strai... [more]
WRBA_THICR1.055e-2737.24Flavoprotein wrbA OS=Thiomicrospira crunogena (str... [more]
WRBA_ACICJ1.799e-2737.50Flavoprotein wrbA OS=Acidiphilium cryptum (strain ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-E08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675585 ID=EY675585; Name=EY675585; organism=Citrus sinensis; type=EST; length=1023bp
CCACGCGTCCGTATTCATCGTGTTCTACCCCATGTATGGCCACGTGGAGG
GGTTGGCAAAGAGGATGACCAAGGGCGTTGATGGCGTTGACGGTGTGGAG
GGCCTGCTGTATCGGGTGCCCGAGACGTTGACGAGGGAGGCCTTGGACCA
CATGAAAGTGCCGCCGAGAGATGATGACATCCCGGAGATTTCGGCGGCGG
ATTTAGTGGAGGCTGACGGGTTCTTGTTTGGGTTTCCGACGAGGTATGGG
TGCATGGCGGCCCAAATGAAGGCTTTTTTCGACTCGACTGGCATGTTGTG
GAAAGAGGGTAAACTTGTCGGTAAACCCGCCGGTTTTTTTGTCAGCACTG
GCACTCAAGGTGGCGGTCAGGAAACCACTGCTTGGACTGCAATTACCCAG
TTGGCCCACCATGGAATGCTATTTGTTCCTATTGGGTACACCTTTGGAGC
CGGTATGTTCAAGATGGACTCTATTCGGGGAGGCTCTCCATATGGTGCTG
GTGTTTTCGCTGGTGATGGCACCAGAAAGCCAAGTGAAACAGAACTGGGA
CTACCAGAACATCAGGGCAAGTTTTTGGCAGCCGGTAGTCAAAAACCTTT
TCGAGGCTTTATCTTTTTAGGTCTTTCTTCCAACCCCCTCTCTTGTGGTT
GGAGTTTGGGTTTGCTTTTGTGATGAATTTTGGGGTTTTATGGGGTTGCC
GGCCACCCATTCCTTTTCTTCTTTTTTTTTTTCCCCAAAATTTCCTTTCC
TGGTTGAAAAAGGTGGTAAATGGAAATGGAAAATTTCTTTTCCCTTTTTT
GGCCCCCCCCACAATTAAAATTTTGGGTGAGAACCACCCGAGGAGATGGT
TTTCTTTTTGTAAAAACTTTTTTTTTTTTCTTTAACACGGTGGGGAAATT
TTTTATCAAGTTAATTATTTTTTTTAAGTGGGTGAAAAAAAATTTTTTCT
TTTAGTCGTTGGGGTGCGCCGAAAAAAGACAAAAAAAAAAAAAATAAATA
AAAAAAGAACATAAAAAAATAAC
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