EY675585

Overview
NameEY675585
Unique NameEY675585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_METRJ (Flavoprotein wrbA OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=wrbA PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 4.007e-27
Identity = 75/200 (37.50%), Postives = 107/200 (53.50%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQK 595
            A V +++Y  YGHVE +A  + +        E ++ RVPE +  E    +H K+   D   P  + A+L + D  +FG PTRYG MA+QMK F D TG LW +G LVGK    F S             +  T L HHGM+ V + Y+F  G   +++++G +PYGA   A GDG+R+PS  EL     QG+ +A  + K
Sbjct:    2 AKVLVLYYSTYGHVEQMAYAVAEGARETGA-EVVVKRVPELVPEEVARQNHFKL---DQAAPVATVAELADYDAIIFGTPTRYGNMASQMKQFIDQTGGLWMKGALVGKVGSVFTSTASQHGGQETTLTSFHTVLFHHGMVVVGLPYSF-QGQAGVEAVKGNTPYGASTIADGDGSRQPSAVELEGARFQGRHVAGIAAK 196          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_ACIF5 (Flavoprotein wrbA OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=wrbA PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 4.007e-27
Identity = 72/198 (36.36%), Postives = 104/198 (52.53%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQKPF 601
            + ++++ ++GHVE +A+   +        +  + RVPET+  E L  +         PE    DL   DG +FG PTR+G M  QM+ F D TG LW+EG+LVGK    FVS             +  T L H GML V + Y+    +  MD I GG+PYGA   + GDG+R+PS  EL +   QG+ +A  ++K F
Sbjct:    4 ILVLYHSLWGHVEQMAEAEAEGARSVSGIQVDVRRVPETMPAETLAAVHAKTHQA-APEAHPDDLANYDGIIFGTPTRFGNMTGQMRNFLDRTGNLWQEGRLVGKVGSVFVSTATQHGGQETTLTSFHTFLFHQGMLVVGVPYSC-TELMNMDEISGGTPYGASTMSKGDGSRQPSANELTIARFQGRHVAEITRKLF 199          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_ACIF2 (Flavoprotein wrbA OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=wrbA PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 4.007e-27
Identity = 72/198 (36.36%), Postives = 104/198 (52.53%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQKPF 601
            + ++++ ++GHVE +A+   +        +  + RVPET+  E L  +         PE    DL   DG +FG PTR+G M  QM+ F D TG LW+EG+LVGK    FVS             +  T L H GML V + Y+    +  MD I GG+PYGA   + GDG+R+PS  EL +   QG+ +A  ++K F
Sbjct:    4 ILVLYHSLWGHVEQMAEAEAEGARSVSGIQVDVRRVPETMPAETLAAVHAKTHQA-APEAHPDDLANYDGIIFGTPTRFGNMTGQMRNFLDRTGNLWQEGRLVGKVGSVFVSTATQHGGQETTLTSFHTFLFHQGMLVVGVPYSC-TELMNMDEISGGTPYGASTMSKGDGSRQPSANELTIARFQGRHVAEITRKLF 199          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_SYNAS (Flavoprotein wrbA OS=Syntrophus aciditrophicus (strain SB) GN=wrbA PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 6.836e-27
Identity = 75/202 (37.13%), Postives = 100/202 (49.50%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDD---DIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAGDGT-RKPSETELGLPEHQGKFLAAGSQKPFR 604
            + +V+Y  YGHV  LA+ + +        E ++ RVPETL    L  + V         +P    A+L  AD  LFG P R+G M  QM++F D+TG LW +G LVGK    F S             +  T L HHGM+ V + YTF  G  + D I G SPYGA   AG    R P+E EL     QG+ +A  + K F+
Sbjct:    3 IMVVYYSAYGHVHRLAEAVAEGASEIVDVEVVMRRVPETLPEALLKKIGVFEAQQAFAHVPVCEVAELETADAILFGTPARFGNMCGQMRSFLDATGGLWAKGALVGKVGSVFTSTGTQHGGQESTILSFHTTLLHHGMIIVGLPYTF-QGQSRNDEITGCSPYGASTIAGSANDRWPTENELAGANFQGRHVACIAGKLFQ 203          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_BURPP (Flavoprotein wrbA OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=wrbA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 8.928e-27
Identity = 72/196 (36.73%), Postives = 103/196 (52.55%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTRE--ALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLAA 583
            A V +++Y MYGH+E +A  + +        E  + RV ET+  +  A   +K+   D   P  +  +L   D  +FG PTR+G MA QM+ F D TG LW +G LVGK    F S             +  + L H GM+ V + Y+  AG+  M  I GG+PYGA   AG DG+R+PS+ EL +   QGK +A+
Sbjct:    2 AKVLVLYYSMYGHIETMADAVAEGARSVPGTEVTIKRVAETIPADQAAAHGVKL---DQKAPVATPDELANYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHSTLLHQGMVIVGVPYSC-AGLVNMTEITGGTPYGATTLAGADGSRQPSQNELDIARFQGKHVAS 193          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_AZOVD (Flavoprotein wrbA OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=wrbA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.166e-26
Identity = 77/195 (39.49%), Postives = 99/195 (50.77%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQ----LAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTRKPSETELGLPEHQGKFLA 580
            + +++Y MYGH+E +A+ + +        E  L RVPET+  E          D   P     +L + D  LFG PTR+G MA QM+ F D TG LW  G LVGK A  F S           + T IT     LAHHGM+ V + Y     +  +   RGGSPYGA   AG DG+R+PSE EL L   QG  +A
Sbjct:    4 ILVLYYSMYGHIERMAEAVAEGARSVPGVEVTLKRVPETMPEEVARKAGAK-LDQAAPPAEPKELADYDAILFGTPTRFGNMAGQMRNFLDQTGGLWVSGALVGKFASVFTS-----TGTGGGSETTITSFWHTLAHHGMVIVGLPYVL-PELSDVSEPRGGSPYGAATIAGADGSRRPSEKELILASFQGAHVA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_RHISN (Flavoprotein wrbA OS=Rhizobium sp. (strain NGR234) GN=wrbA PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.523e-26
Identity = 72/195 (36.92%), Postives = 101/195 (51.79%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREAL--DHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAG-VFAGDGTRKPSETELGLPEHQGKFLA 580
            A V +++Y  YGH+E +A  + +        E  + RVPE ++ E     H K+   D   P  +  +L + D  +FG  TRYG +A+Q++ F D TG LW +GKLVGK    F S               I  + HHGM+ V + Y F  G   +D I+GGSPYGA  +  GDG+R+PSE EL     QG  +A
Sbjct:    2 AKVLVLYYSAYGHIEKMAYAVAEGAESAGA-EVSVKRVPELVSEEVAKASHYKI---DQPAPVATVEELGDYDAIIFGAGTRYGTVASQLRNFIDQTGSLWAKGKLVGKVGSAFTSSATQHGGQESTILGLIPTMLHHGMVVVGLPYAF-QGQMGIDEIKGGSPYGASTITGGDGSRQPSEIELDAARFQGAHVA 191          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_CHRSD (Flavoprotein wrbA OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=wrbA PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.392e-26
Identity = 73/200 (36.50%), Postives = 106/200 (53.00%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEI--SAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQK 595
            + V +++Y  YGHVE LA  + +        +  LYRV E +  E     K   ++D    +    + L E D  + G PTR+G MA+QM+ F+D TG LW +GKL+GK  G F S             +  T L HHGM  V + Y+  A + ++D + GG+PYGA   A GDG+R+PSE EL +   QG+ +A  + K
Sbjct:    2 SKVLVLYYSSYGHVETLANAVAEGVRGVAGTQVDLYRVAELVPDEVA--AKSGYKEDTTAAVLDDPSVLAEYDAIVVGTPTRFGNMASQMRNFWDKTGGLWAQGKLIGKLGGAFTSTASQHGGQETTLTSIHTTLLHHGMAVVGVPYSCPA-LTELDEVSGGTPYGATTIAGGDGSRQPSENELTIARFQGQHIAEMAAK 198          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_METPB (Flavoprotein wrbA OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=wrbA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.787e-26
Identity = 74/200 (37.00%), Postives = 105/200 (52.50%), Query Frame = 2
Query:    5 ASVFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALD--HMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQK 595
            A V +++Y  +GHVE +A  + +        E  + RVPE +  E     H K+   D   P  +  +L + D  +FG PTRYG MA+QMK F D TG LW +G LVGK    F S             +  T + HHGM+ V + Y+F AG   ++ ++G SPYGA   A GDG+R+PS+ EL     QG+ +A  + K
Sbjct:    2 AKVLVLYYSSWGHVEQMANAVAEGAREAGA-EVAVKRVPELVPEEVARQFHYKL---DQAAPIATVEELADYDAIIFGTPTRYGNMASQMKQFIDQTGGLWAKGALVGKVGSAFTSTASQHGGQETTLTSFHTVMFHHGMVVVGLPYSF-AGQNGVEQVKGNSPYGATTIADGDGSRQPSQVELDGARFQGRHVAGIAAK 196          
BLAST of EY675585 vs. ExPASy Swiss-Prot
Match: WRBA_METAC (Flavoprotein wrbA OS=Methanosarcina acetivorans GN=wrbA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.289e-25
Identity = 76/203 (37.44%), Postives = 100/203 (49.26%), Query Frame = 2
Query:   11 VFIVFYPMYGHVEGLAKRMTKXXXXXXXXEGLLYRVPETLTREALDHM---KVPPRDDDIP----EISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTRKPSETELGLPEHQGKFLAAGSQK 595
            V I+FY MYGHV  +A+ +          E  +Y+VPETL  E L+ M   +       IP    E++   L  AD  +FG PTRYG M AQM+A  D  G LW     VGK    F S             T    L H GM+ V + Y+      +MD I GGSPYG    A GDG+R+PSE EL +  +QG+ +   ++K
Sbjct:    4 VNIIFYSMYGHVYRMAEAVAAGAREVEGAEVGIYQVPETLPEEVLEKMGAIETKKLFAHIPVLTREMNEEVLAGADALIFGTPTRYGNMTAQMRAVLDGLGGLWNRDAFVGKVGSVFTSSGTQHGGQESTILTFHVTLLHLGMILVGLPYS-EKRQTRMDEITGGSPYGVSTIAGGDGSRQPSENELAMARYQGRHVTLIAKK 205          
The following BLAST results are available for this feature:
BLAST of EY675585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_METRJ4.007e-2737.50Flavoprotein wrbA OS=Methylobacterium radiotoleran... [more]
WRBA_ACIF54.007e-2736.36Flavoprotein wrbA OS=Acidithiobacillus ferrooxidan... [more]
WRBA_ACIF24.007e-2736.36Flavoprotein wrbA OS=Acidithiobacillus ferrooxidan... [more]
WRBA_SYNAS6.836e-2737.13Flavoprotein wrbA OS=Syntrophus aciditrophicus (st... [more]
WRBA_BURPP8.928e-2736.73Flavoprotein wrbA OS=Burkholderia phytofirmans (st... [more]
WRBA_AZOVD1.166e-2639.49Flavoprotein wrbA OS=Azotobacter vinelandii (strai... [more]
WRBA_RHISN1.523e-2636.92Flavoprotein wrbA OS=Rhizobium sp. (strain NGR234)... [more]
WRBA_CHRSD3.392e-2636.50Flavoprotein wrbA OS=Chromohalobacter salexigens (... [more]
WRBA_METPB5.787e-2637.00Flavoprotein wrbA OS=Methylobacterium populi (stra... [more]
WRBA_METAC1.289e-2537.44Flavoprotein wrbA OS=Methanosarcina acetivorans GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-E08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675585 ID=EY675585; Name=EY675585; organism=Citrus sinensis; type=EST; length=1023bp
CCACGCGTCCGTATTCATCGTGTTCTACCCCATGTATGGCCACGTGGAGG
GGTTGGCAAAGAGGATGACCAAGGGCGTTGATGGCGTTGACGGTGTGGAG
GGCCTGCTGTATCGGGTGCCCGAGACGTTGACGAGGGAGGCCTTGGACCA
CATGAAAGTGCCGCCGAGAGATGATGACATCCCGGAGATTTCGGCGGCGG
ATTTAGTGGAGGCTGACGGGTTCTTGTTTGGGTTTCCGACGAGGTATGGG
TGCATGGCGGCCCAAATGAAGGCTTTTTTCGACTCGACTGGCATGTTGTG
GAAAGAGGGTAAACTTGTCGGTAAACCCGCCGGTTTTTTTGTCAGCACTG
GCACTCAAGGTGGCGGTCAGGAAACCACTGCTTGGACTGCAATTACCCAG
TTGGCCCACCATGGAATGCTATTTGTTCCTATTGGGTACACCTTTGGAGC
CGGTATGTTCAAGATGGACTCTATTCGGGGAGGCTCTCCATATGGTGCTG
GTGTTTTCGCTGGTGATGGCACCAGAAAGCCAAGTGAAACAGAACTGGGA
CTACCAGAACATCAGGGCAAGTTTTTGGCAGCCGGTAGTCAAAAACCTTT
TCGAGGCTTTATCTTTTTAGGTCTTTCTTCCAACCCCCTCTCTTGTGGTT
GGAGTTTGGGTTTGCTTTTGTGATGAATTTTGGGGTTTTATGGGGTTGCC
GGCCACCCATTCCTTTTCTTCTTTTTTTTTTTCCCCAAAATTTCCTTTCC
TGGTTGAAAAAGGTGGTAAATGGAAATGGAAAATTTCTTTTCCCTTTTTT
GGCCCCCCCCACAATTAAAATTTTGGGTGAGAACCACCCGAGGAGATGGT
TTTCTTTTTGTAAAAACTTTTTTTTTTTTCTTTAACACGGTGGGGAAATT
TTTTATCAAGTTAATTATTTTTTTTAAGTGGGTGAAAAAAAATTTTTTCT
TTTAGTCGTTGGGGTGCGCCGAAAAAAGACAAAAAAAAAAAAAATAAATA
AAAAAAGAACATAAAAAAATAAC
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