EY675498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675498 vs. ExPASy Swiss-Prot
Match: PTC1_DANRE (Protein patched homolog 1 OS=Danio rerio GN=ptch1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.368e-12 Identity = 39/93 (41.94%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 11 GIAVEPLVHLVHAFLVSHGPRNQRSQKALSTMGASVFSGITLTKLVGVIVLCFARSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSLFGPPS 289 GI VE VH+ FL + G RN RS A+ M A V G ++ L+GV++L + + + Y+F + L ++G L+GLV LPV+LSL GPP+ Sbjct: 1080 GIGVEFTVHIALGFLTAIGDRNTRSAVAMEHMFAPVIDG-AISTLLGVLMLAGSEFDFIMRYFFAVLAILTLLGILNGLVLLPVLLSLMGPPA 1171
BLAST of EY675498 vs. ExPASy Swiss-Prot
Match: PTC1_CHICK (Protein patched homolog 1 OS=Gallus gallus GN=PTCH1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.787e-12 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 11 GIAVEPLVHLVHAFLVSHGPRNQRSQKALSTMGASVFSGITLTKLVGVIVLCFARSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSLFGP 283 GI VE VH+ AFL + G +N+R+ AL M A V G T L+GV++L + + V Y+F + L I+G L+GLV LPV+LS FGP Sbjct: 1090 GIGVEFTVHIALAFLTAIGDKNRRAVLALEHMFAPVLDGAVST-LLGVLMLAGSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGP 1179
BLAST of EY675498 vs. ExPASy Swiss-Prot
Match: PTC1_MOUSE (Protein patched homolog 1 OS=Mus musculus GN=Ptch1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.334e-12 Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 11 GIAVEPLVHLVHAFLVSHGPRNQRSQKALSTMGASVFSGITLTKLVGVIVLCFARSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSLFGP 283 GI VE VH+ AFL + G +N R+ AL M A V G T L+GV++L + + V Y+F + L ++G L+GLV LPV+LS FGP Sbjct: 1077 GIGVEFTVHVALAFLTAIGDKNHRAMLALEHMFAPVLDGAVST-LLGVLMLAGSEFDFIVRYFFAVLAILTVLGVLNGLVLLPVLLSFFGP 1166
BLAST of EY675498 vs. ExPASy Swiss-Prot
Match: PTC1_HUMAN (Protein patched homolog 1 OS=Homo sapiens GN=PTCH1 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.334e-12 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 11 GIAVEPLVHLVHAFLVSHGPRNQRSQKALSTMGASVFSGITLTKLVGVIVLCFARSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSLFGP 283 GI VE VH+ AFL + G +N+R+ AL M A V G T L+GV++L + + V Y+F + L I+G L+GLV LPV+LS FGP Sbjct: 1091 GIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVST-LLGVLMLAGSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGP 1180 The following BLAST results are available for this feature:
BLAST of EY675498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675498 ID=EY675498; Name=EY675498; organism=Citrus sinensis; type=EST; length=578bpback to top |