EY675446

Overview
NameEY675446
Unique NameEY675446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1015
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675446 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.547e-45
Identity = 81/176 (46.02%), Postives = 118/176 (67.05%), Query Frame = 2
Query:    5 ATFLDDFKVTWSDAHLRQIEGG---RAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATR 523
            A F + F V  +  H+R +      + + L LD++SG GF SK  YLFG  S+++KLV G+SAGTVT+FY++S   +  DE+D EF+GN +G PY + TN++ANG G +E +  LWFDP AD+H Y I+WN  +I+F VDDVP+R +K      +P ++PM +++TLW+   WATR
Sbjct:   26 AGFYEKFDVVGAGDHVRVVSDDGKTQQVALTLDRSSGSGFTSKDTYLFGEFSVQMKLVGGNSAGTVTSFYLSSGEGDGHDEIDIEFMGNLSGNPYVMNTNVWANGDGKKEHQFYLWFDPTADFHTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATR 201          

HSP 2 Score: 23.8682 bits (50), Expect = 2.547e-45
Identity = 12/37 (32.43%), Postives = 20/37 (54.05%), Query Frame = 1
Query:  538 KIEWSKAPFYA*YKNF---*ILKGRPSPG-TNKWWPQ 636
            KI+WS APF   Y+ +     +   P+ G ++ W P+
Sbjct:  206 KIDWSGAPFVVSYRGYSTNACVNNNPAGGWSSSWCPE 242          
BLAST of EY675446 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 3.234e-45
Identity = 90/176 (51.14%), Postives = 121/176 (68.75%), Query Frame = 2
Query:    5 ATFLDDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRG 526
            A F  +F VTW   H+     G  ++LVLD+++G    SK  +LFG V M IKLVPG+SAGTV A+Y++S T +  DE+DFEFLGN TGQPYT+ TN+YA GKG+REQ+   WF+P   +H YTI WN   +V++VD  PIRV++N  S    +P  Q M V+++LW A+DWAT+G
Sbjct:   27 ADFSKNFIVTWGKDHM--FMNGTNLRLVLDKSAGSAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSS-TGSTHDEIDFEFLGNATGQPYTIHTNLYAQGKGNREQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWATQG 199          
BLAST of EY675446 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.096e-44
Identity = 91/191 (47.64%), Postives = 125/191 (65.45%), Query Frame = 2
Query:   20 DFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRA--PFPMNQPMGVYSTLWEADDWATRGWSKEK*NGAKLLFMLNTKTF 586
            ++ VTW   H+ ++  G+ +QL +D +SG GF SK  Y  G   M+IKL P DSAG VTAFY+ S  +   DE+DFEFLGNR G+P  +QTN+++NG+G REQ+   WFDP   +H Y ILWN + IVFYVD VPIRV+KN  ++   +P ++PM + ++LW  ++WAT G  KEK N A   F    + F
Sbjct:   35 NYVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLTSKGDT-HDEVDFEFLGNRQGKPIAIQTNVFSNGQGGREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYP-SKPMQLVASLWNGENWATSG-GKEKINWAYAPFKAQYQGF 222          
BLAST of EY675446 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.953e-43
Identity = 90/194 (46.39%), Postives = 128/194 (65.98%), Query Frame = 2
Query:   11 FLDDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGWSKEK*NGAKLLFMLNTKTF 586
            F D++ VTW   ++ ++  G+ +QL LD +SG GF SK  Y  G   ++IK+ P D++G VTAFY+ S   N  DE+DFEFLGN+ G+   VQTN++ NGKG+REQ++ LWFDP+ D+H Y ILWN + IV YVD++P+RV+KN  S    +P ++PM V  +LW  ++WAT G  K K N +   F  N + F
Sbjct:   39 FDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSKG-NTHDEVDFEFLGNKEGK-LAVQTNVFTNGKGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYP-SKPMQVVVSLWNGENWATDG-GKSKINWSLAPFKANFQGF 228          
BLAST of EY675446 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.719e-38
Identity = 79/174 (45.40%), Postives = 107/174 (61.49%), Query Frame = 2
Query:   20 DFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENV--RDELDFEFLGNRTGQPYTVQTNIYANGKGDR-----EQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWAT 520
            +F+  W   H R+ +    + L LD+++G GF S R Y  G     IKL PG +AG  T+ Y+++N E+    DE+D EFLG   G+PY++QTN++  G GDR     E +  LWFDP  D+H Y ILWN + IVF+VDDVPIR Y     A FP  +PM VY ++W+A DWAT
Sbjct:   42 EFRTLWGSQHQRREQD--VVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYNRKNEAIFP-TRPMWVYGSIWDASDWAT 212          
BLAST of EY675446 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 9.430e-37
Identity = 79/179 (44.13%), Postives = 111/179 (62.01%), Query Frame = 2
Query:    8 TFLDDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLGNRTGQPYTVQTNIYANGK--GDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRG 526
            +F + +   + D +L   + G++++L LD+ +G GF S   YL G  S  IKL    +AG V AFYM++    E   DE+DFEFLGN   + + VQTNIY NG     RE+R NLWFDP  D+H Y+ILW+  HI+F+VD+VPIR  K +      FP ++PM +Y+T+W+   WAT G
Sbjct:   30 SFEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFP-SKPMSLYTTIWDGSKWATNG 207          
BLAST of EY675446 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.609e-36
Identity = 81/178 (45.51%), Postives = 109/178 (61.24%), Query Frame = 2
Query:   11 FLDDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLGNRTGQPYTVQTNIYANGKGD--REQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRG 526
            F + +   + D +L     G++++L LD+ +G GF S   YL G  S  IKL    SAG V AFY+++    E   DE+DFEFLGN  G+ + +QTNIY NG     RE+R NLWFDP  D+H Y+ILW+  HI+FYVD+VPIR  K +      FP  +PM +YST+W+   WAT G
Sbjct:   31 FDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPA-KPMSLYSTIWDGSKWATDG 207          
BLAST of EY675446 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.362e-35
Identity = 74/177 (41.81%), Postives = 104/177 (58.76%), Query Frame = 2
Query:   11 FLDDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLGNRTGQPYTVQTNIYANGKGD-----REQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWAT 520
            F   F+  W   H R  +   A+ + LD+ SG GF S + +  G     IKL PG +AG +T+ Y+++N  +    DE+D EFLG   G+PYT+QTN+Y  G GD     RE +  LWFDP  D+H Y ILW+   I+F VDD+PIR Y     + FP+ +PM +Y ++W+A  WAT
Sbjct:   43 FYKGFRNLWGPQHQRMDQN--ALTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIRRYPKKSASTFPL-RPMWLYGSIWDASSWAT 216          
BLAST of EY675446 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.779e-35
Identity = 83/198 (41.92%), Postives = 115/198 (58.08%), Query Frame = 2
Query:    8 TFLDDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDR--EQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIR-VYKNSGRAPFPMNQPMGVYSTLWEADDWATRGWSKEK*NGAKLLFMLNTKTF 586
            +F +     + DA+L +     +++L+LD+ +G GF S   Y  G  S  IKL    +AG V AFY ++    E   DELD EFLGN  G+P+  QTN+Y NG   R  E+R  LWFDP+ ++H Y+ILW  H I+F+VDDVPIR V +N         +PM +Y+T+W+A DWAT G  K K N     F+   K+F
Sbjct:   31 SFEESLSPLFGDANLVRSPDDLSVRLLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPAKPMALYATIWDASDWATSG-GKYKANYKFAPFVAEFKSF 227          
BLAST of EY675446 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 3.708e-33
Identity = 72/168 (42.86%), Postives = 106/168 (63.10%), Query Frame = 2
Query:   44 AHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENV---RDELDFEFLGNRTGQPYTVQTNIYANG--KGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRG 526
            AH  Q+ G  A +L LD++SG G  SK +Y +G  S ++KL  G ++G V AFY+ SN E      DE+D E LG      +T+QTN+YANG  +  RE++   WFDP   +H YT++WN HH VF VD++P+R + N G   + +P ++PM +Y T+W+  +WAT+G
Sbjct:   53 AHNIQVNGSLA-KLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYL-SNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYP-SKPMSLYVTVWDGSEWATKG 217          
The following BLAST results are available for this feature:
BLAST of EY675446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
XTH8_ORYSJ2.547e-4546.02Xyloglucan endotransglycosylase/hydrolase protein ... [more]
XTH26_ARATH3.234e-4551.14Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH2_ARATH2.096e-4447.64Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH1_ARATH3.953e-4346.39Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH31_ARATH1.719e-3845.40Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH27_ARATH9.430e-3744.13Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH28_ARATH1.609e-3645.51Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH32_ARATH1.362e-3541.81Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH30_ARATH1.779e-3541.92Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH33_ARATH3.708e-3342.86Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-010-F05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675446 ID=EY675446; Name=EY675446; organism=Citrus sinensis; type=EST; length=1015bp
ACCGGCTACTTTTCTTGACGATTTTAAAGTCACATGGTCCGATGCCCATC
TCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCTAGTTCTAGACCAAAAT
TCAGGATGTGGGTTTGCTTCCAAAAGGCAGTACTTGTTCGGGCGTGTAAG
CATGAAGATCAAGCTCGTTCCTGGAGACTCTGCTGGAACTGTCACTGCAT
TTTATATGAATTCCAACACCGAAAATGTGAGAGACGAGCTTGATTTTGAG
TTCCTGGGAAACCGAACGGGTCAGCCTTACACGGTCCAGACCAATATCTA
TGCAAATGGAAAAGGCGATAGAGAACAGAGAGTGAACCTCTGGTTTGACC
CTGCTGCAGATTATCACCTTTACACTATTCTCTGGAACCATCACCATATT
GTCTTCTATGTGGATGATGTTCCCATCAGGGTTTACAAAAACAGTGGAAG
GGCTCCATTTCCAATGAACCAACCCATGGGGGTGTATTCGACGCTGTGGG
AAGCAGATGACTGGGCAACAAGAGGGTGGTCTAAAGAAAAATAGAATGGA
GCAAAGCTCCTTTTTATGCTTAATACAAAAACTTTTGAATATTGAAGGGG
CGGCCCAGTCCCGGGACCAACAAATGGTGGCCTCAAACCCAGGTAAAACG
GGGGGGGGAAGGAAAATAAATTATAAAACCCCCCACCCCCCAAGAAAAAA
AAAAAAAAAAACAAAAAAGGGTTTCGTCCCCCACCCCCCCATGAATCCTA
GATTTTATTGGCCCTGGAAAAAATCAAGAAAACCCCAAAACCCCCCCCGG
AAAAGCCCTTGGCCGGGAATAAAAATTTAAACCCCCCCCCAATTTAAATA
AAACCAGTTGGGGAGAGGGGACCCCCCCAAATCCCCCTAATTAAAACCCA
GGGTTGAAATATTACCTCTCCCCGGGTGACCACGCCCCCCTTTTTTGGTT
TTTTTTATTCCCCCCCCTTTTCTCCGTGGGGGAGAAAAAAAAAACCAAAT
ATTATTATAAACCAC
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