EY675359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 4.360e-66 Identity = 149/282 (52.84%), Postives = 179/282 (63.48%), Query Frame = 3 Query: 39 MATSTIALSSSFVGKAVN-LAPSGNELSNGG------RISMRK-TGSKSVSSG--SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFSQVLVSFIPGIFSPARGTV*KNLGKNLLDETCIKKIWLGGILTTNFFP 854 MA+ I +F G ++ + P N+L G R++MRK TG KSV++ SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG P+ ++ + ++ GP + TDP+YPGGNF +G +DP+ F ++ K GR+ +FS + F +G + +NL +L D W TNF P Sbjct: 5 MASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQL-IHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGL-ADDPDAFA-ELKVKEIKNGRLAMFS--MFGFFVQAIVTGKGPI-ENLADHLADPV-NNNAW---AYATNFVP 276
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 251.906 bits (642), Expect = 4.360e-66 Identity = 150/276 (54.35%), Postives = 176/276 (63.77%), Query Frame = 3 Query: 39 MATSTIALSSSFVGKAVNLAPS-GNELSNGGRISMRKTGSK---SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFSQVLVSFIPGIFSPARGTV*KNLGKNLLDETCIKKIWLGGILTTNFFP 854 MA +T+ALSS + +A APS + L RI+MRKT +K + SSGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLG P ++ + ++ GP + DPLYPGG F +G +DPE F ++ K GR+ +FS + F +G + +NL +L D W TNF P Sbjct: 1 MAAATMALSSPVMARA---APSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-IHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGL-ADDPEAFA-ELKVKEIKNGRLAMFS--MFGFFVQAIVTGKGPL-ENLADHLADPV-NNNAW---AYATNFVP 263
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 2.164e-65 Identity = 146/282 (51.77%), Postives = 174/282 (61.70%), Query Frame = 3 Query: 39 MATSTIALSSSFVGKAVNLAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFSQVLVSFIPGIFSPARGTV*KNLGKNLLDETCIKKIWLGGILTTNFFP 854 MA+ I + G+ +L P N+L G R++MRK +K ++ S SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG P ++ + ++ GP + TDP+YPGG+F +G DPE F ++ K GR+ +FS + F +G + +NL +L D W TNF P Sbjct: 1 MASCGIGSCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL-VHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGL-AEDPEAFA-ELKVKEIKNGRLAMFS--MFGFFVQAIVTGKGPI-ENLADHLADPV-NNNAW---AYATNFVP 272
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 248.054 bits (632), Expect = 6.296e-65 Identity = 147/275 (53.45%), Postives = 175/275 (63.64%), Query Frame = 3 Query: 39 MATSTIALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFSQVLVSFIPGIFSPARGTV*KNLGKNLLDETCIKKIWLGGILTTNFFP 854 MA +T+ALSS + GKA ++ GRI+MRK+ +K +SGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLG P ++ + ++ GP + DPLYPGG+F +G +DPE F ++ K GR+ +FS + F +G + +NL +L D W TNF P Sbjct: 1 MAAATMALSSPALAGKAAA------KVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-IHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL-ADDPEAFA-ELKVKEIKNGRLAMFS--MFGFFVQAIVTGKGPL-ENLADHLADPV-NNNAW---AYATNFVP 259
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 1.187e-63 Identity = 144/254 (56.69%), Postives = 169/254 (66.54%), Query Frame = 3 Query: 39 MATSTIALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFSQVLVSFIPGIFSPARGTV*KNLGKNLLD 797 MA ST+ALSSS G+A+ LAPS EL G R+SMRKT K+VSSGSPWYGPDRVKYLGPFSGE PSYLTGEF G LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLG P ++ + ++ GP + TDP+YPGG+F +G +DPE ++ K GR+ +FS + F +G + +NL +L D Sbjct: 1 MAASTMALSSSSLAGQAMKLAPSTPELGVG-RVSMRKTAPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-IHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGL-ADDPEALA-ELKVKELKNGRLAMFS--MFGFFVQAIVTGKGPL-ENLADHLAD 239
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 4.223e-61 Identity = 141/277 (50.90%), Postives = 171/277 (61.73%), Query Frame = 3 Query: 39 MATSTIALSSSFVGKAVNLAPSGNELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFSQVLVSFIPGIFSPARGTV*KNLGKNLLDETCIKKIWLGGILTTNFFP 854 MATST AL+S+F G+ + NELS R+ M SK+ SGS WYG DR YLGPFSG PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG+QIF+EGGLDYLG P ++ + ++ GP + DP+YPGG+F +G +DPE F ++ K GR+ +FS + F +G + +NL +L D + W TNF P Sbjct: 1 MATSTAALTSTFSGQQLKPV---NELSRKVGAGEARVQMMAPKSKA-PSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSL-VHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGL-ADDPEAFA-ELKVKELKNGRLAMFS--MFGFFVQAIVTGKGPI-ENLSDHLAD-PAVNNAW---AYATNFTP 263
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 2.737e-60 Identity = 130/212 (61.32%), Postives = 146/212 (68.87%), Query Frame = 3 Query: 39 MATSTIALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGF 659 MATSTI S+F G+ + L P NEL NGGR+SMR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NGVKFGEAVWFKAG+QIF EGGLDYLG P ++ + ++ GP + D LYPGG F +G DPE F Sbjct: 1 MATSTIQ-QSAFAGQTL-LKPQ-NELVRKVGGNGGRVSMRRTIKSAPES--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNL-VHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGL-AEDPEAF 205
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 232.261 bits (591), Expect = 3.575e-60 Identity = 140/278 (50.36%), Postives = 170/278 (61.15%), Query Frame = 3 Query: 39 MATSTIALSSSFVGKAVNLAPSGNELS------NGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFSQVLVSFIPGIFSPARGTV*KNLGKNLLDETCIKKIWLGGILTTNFFP 854 MATS I S+F G+ NEL GGR+SMR+T + +S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLG P ++ + ++ GP + DP+YPGG F +G +DP+ F ++ K GR+ +FS + F +G + +NL +L D W TNF P Sbjct: 1 MATSAIQ-QSAFAGQTA--LKQSNELVCKIGAVGGGRVSMRRTVKSAPTS--IWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNL-IHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGL-ADDPDAFA-ELKVKEIKNGRLAMFS--MFGFFVQAIVTGKGPI-ENLFDHLADPVA-NNAW---AYATNFVP 263
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 4.669e-60 Identity = 127/217 (58.53%), Postives = 149/217 (68.66%), Query Frame = 3 Query: 147 TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFSQVLVSFIPGIFSPARGTV*KNLGKNLLD 797 T K SS SPW+GPD VKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLG P ++ + ++ GP + DPLYPGG+F +G PE F ++ K GR+ +FS + F+P I + +G + +NL +L D Sbjct: 1 TTKKVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-VHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL-AEVPEAFA-ELKVKELKNGRLAMFS-MFGFFVPAIVT-GKGPL-ENLADHLAD 211
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.962e-58 Identity = 130/259 (50.19%), Postives = 165/259 (63.71%), Query Frame = 3 Query: 39 MATSTIALSSSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFSQVLVSFIPGIFSPARGTV*KNLGKNLLD 797 MA +T S++ G++ L NELS R++MR+T SKS S + WYG DR K+LGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA++GVKFGEAVWFKAGAQIFSEGGLDYLG P ++ + ++ GP + TDP+YPGG+F +G +DP+ F ++ K GR+ +FS + F +G + +NL +L D Sbjct: 1 MAAATAMHSTALAGQS--LVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL-VHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGL-ADDPDTFA-ELKVKEIKNGRLAMFS--MFGFFVQAIVTGKGPL-ENLNDHLAD 251 The following BLAST results are available for this feature:
BLAST of EY675359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675359 ID=EY675359; Name=EY675359; organism=Citrus sinensis; type=EST; length=1019bpback to top |