EY675359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 7.982e-52 Identity = 116/214 (54.21%), Postives = 137/214 (64.02%), Query Frame = 3 Query: 213 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFSQVLVSFIPGIFSPARGTV*KNLGKNLLDETCIKKIWLGGILTTNFFP 854 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLG P ++ + ++ GP + TDP+YPGG+F +G +DPE F ++ K GR+ +FS + F +G + +NL +L D W TNF P Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-VHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGL-ADDPEAFA-ELKVKELKNGRLAMFS--MFGFFVQAIVTGKGPL-ENLADHLADPV-NNNAW---AYATNFVP 204
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.409e-48 Identity = 112/225 (49.78%), Postives = 143/225 (63.56%), Query Frame = 3 Query: 141 RKTGSKSV---SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFSQVLVSFIPGIFSPARGTV*KNLGKNLLDET 803 +KT +K+ SSG +YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKAGAQIFSEGGLDYLG P ++ + ++ GP+ + DPLYPG +F +G +DP+ F ++ K GR+ FS + F +G V +NL +L + T Sbjct: 20 KKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSL-VHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGL-ADDPDTFA-ELKVKEIKNGRLASFS--MFGFFVQAIVTGKGPV-QNLDDHLANPT 238
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 5.354e-48 Identity = 109/212 (51.42%), Postives = 134/212 (63.21%), Query Frame = 3 Query: 165 SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFSQVLVSFIPGIFSPARGTV*KNLGKNLLD 797 S+G WYGPDR K+LGPFS P+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAGAQIFSEGGLDYLG P ++ + ++ GP+ + DPLYPG +F +G +DP+ F ++ K GR+ +FS F +G + +NL +L D Sbjct: 34 SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPAL-IHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGL-ADDPDTFA-ELKVKEIKNGRLAMFS--CFGFFVQAIVTGKGPI-QNLADHLAD 239
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 2.250e-46 Identity = 113/213 (53.05%), Postives = 131/213 (61.50%), Query Frame = 3 Query: 75 VGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFS 713 + K L P + L +M K +KS S S RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKAGAQIFSEGGLDYLG P ++ + ++ GP + TDPLYP G+F S+G D E F ++ K GR+ +FS Sbjct: 20 IAKPSKLNPISSTLIVTAGFTMLKHAAKSKVSSSTC--DRRVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSL-VHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYP-GSFDSLGL-AEDTEAFA-ELKVKELKNGRLAMFS 226
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.938e-46 Identity = 107/227 (47.14%), Postives = 134/227 (59.03%), Query Frame = 3 Query: 42 ATSTIALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSK--XXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFS 713 +++T+ ++ F+G+ N P + ++ G ++ S WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+L + V F E VWFKAG+QIFS+GGLDYLG P E R+ L P V + LYPGG + +DP F ++ K GR+ +FS Sbjct: 9 SSTTVVKATPFLGQTKNANPLRDVVAMGS--------ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL---PGVGEGNDLYPGGQYFDPLGLADDPTTFA-ELKVKEIKNGRLAMFS 223
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 8.548e-46 Identity = 120/279 (43.01%), Postives = 150/279 (53.76%), Query Frame = 3 Query: 42 ATSTIALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSP-WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTD------PLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFSQVLVSFIPGIFSPARGTV*KNLGKNLLDETCIKKIWLGGILTTNFFP 854 +T A S + V K L+ G S + + ++ G+ WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L + GV+F E VWFKAG+QIFSEGGLDYLG P + + L EG + D LYPGG + +DP F ++ K GR+ +FS + F +G + +NL + LD+ W + T F P Sbjct: 3 STIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGF-------QVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFA-ELKVKEIKNGRLAMFS--MFGFFVQAIVTGKGPL-ENLFDH-LDDPVANNAW---VFATKFAP 266
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.081e-40 Identity = 105/215 (48.84%), Postives = 133/215 (61.86%), Query Frame = 3 Query: 180 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGKPKPDPRSK--XXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFSQVLVSFIPGIFSPARGTV*KNLGKNLLDETCIK 812 +YGPDR K+LGPFS + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+LGALG + PELL++ GV+FGE VWFKAGAQIF++GGL+YLG E R EG + D LYPGG F +G +DP+ F ++ K GR+ +FS L F+ I + +G V +NL +L D T K Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEG-FLDDLDTLYPGGPFDPLGL-ADDPDTFA-ELKVKEIKNGRLAMFS-CLGFFVQAIVT-GKGPV-QNLTDHLADPTVNK 241
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 5.747e-34 Identity = 88/192 (45.83%), Postives = 115/192 (59.90%), Query Frame = 3 Query: 144 KTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGE-AVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFS 713 K SKS SS + +YGPD + P TGEFPGDYGWDTAGLSADPETF + RELE+IH R +LGALG V PELLA +G+KFG+ A+WFKAGA IF +GGL+YLG P ++ + ++ GP+ + DPLYPG F +G +DP+ F ++ K GR+ +F+ Sbjct: 45 KAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSL-IHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGL-ADDPDTFA-ELKVKEIKNGRLAMFA 232
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 5.392e-24 Identity = 85/223 (38.12%), Postives = 109/223 (48.88%), Query Frame = 3 Query: 153 SKSVSSGSP----WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGKPKPDPRSKXXXXXXXXXXS*WEPLRVTKLREGPSVKWTDPLYPGGNF*SIGFWLNDPEGFG*PQG*RKTKKGRVGLFSQVLVSFIPGIFSPARGTV*KNLGKNLLD 797 SK+VS S WYGPDR +L E P YL GE GDYG+D GL PE FAK + E+IH RWAMLGA G + PE L + G G EAVWFK GA + L+Y GK P E R+T + + D L+PGG F +G DPE G ++ K GR+ +F+ ++ F + G V +NL K+L D Sbjct: 49 SKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIP-INLVLAVVAEVVLLGGAEYYRITN-----GLDFEDKLHPGGPFDPLGL-AKDPEQ-GALLKVKEIKNGRLAMFA--MLGFFIQAYVTGEGPV-ENLAKHLSD 260
BLAST of EY675359 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.804e-15 Identity = 40/86 (46.51%), Postives = 54/86 (62.79%), Query Frame = 3 Query: 189 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQ 443 PDR + F G PP +L G PGD+G+D GL++DPE+ N++ E++HCRWAMLGA G PELL + G+ W+ AG Q Sbjct: 63 PDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI-LNTPSWYTAGEQ 144 The following BLAST results are available for this feature:
BLAST of EY675359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675359 ID=EY675359; Name=EY675359; organism=Citrus sinensis; type=EST; length=1019bpback to top |