EY675339

Overview
NameEY675339
Unique NameEY675339
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1047
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 7.115e-11
Identity = 35/103 (33.98%), Postives = 56/103 (54.37%), Query Frame = 3 
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 323
            G A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +G    +  + ++L
Sbjct:  126 GQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FSNHWVYWVGPIIGGGLGSLLYDFLL 221
[Close]
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 7.115e-11
Identity = 35/103 (33.98%), Postives = 56/103 (54.37%), Query Frame = 3 
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 323
            G A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +G    +  + ++L
Sbjct:  128 GQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FSNHWVYWVGPIIGGGLGSLLYDFLL 223
[Close]
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.292e-11
Identity = 36/103 (34.95%), Postives = 57/103 (55.34%), Query Frame = 3 
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 323
            G A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +GA   +  + ++L
Sbjct:  128 GQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPVIGAGLGSLLYDFLL 223
[Close]
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.292e-11
Identity = 37/103 (35.92%), Postives = 54/103 (52.43%), Query Frame = 3 
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 323
            G A   EI  T   V  +F+  D +R+ R   V     L IGF++ + HL  +  TG  +NPARSF  AV+  N   + +HW++WVGP +G       + +IL
Sbjct:  128 GQATTVEIFLTLQFVLCIFATYDERRNGRLGSVS----LAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRN---FTNHWVYWVGPIIGGALGGLVYDFIL 223
[Close]
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.292e-11
Identity = 36/103 (34.95%), Postives = 57/103 (55.34%), Query Frame = 3 
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 323
            G A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +GA   +  + ++L
Sbjct:  128 GQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPVIGAGLGSLLYDFLL 223
[Close]
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.292e-11
Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 3 
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 323
            G A+  E++ T  LV  VF++ D +++             IG +V + HL  I  TG  +NPARSFG AVI         HWIFWVGP  GA+ A+  + +IL
Sbjct:  139 GQAVAVELVLTLQLVLCVFASMDSRQTLGSPAAM------IGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAV---HWIFWVGPLTGAVLASLIYNFIL 232
[Close]
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.292e-11
Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 3 
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 323
            G A+  E++ T  LV  VF++ D +++             IG +V + HL  I  TG  +NPARSFG AVI         HWIFWVGP  GA+ A+  + +IL
Sbjct:  139 GQAVAVELVLTLQLVLCVFASMDGRQTLASPAAM------IGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAV---HWIFWVGPLTGAVLASLIYNFIL 232
The following BLAST results are available for this feature:
BLAST of EY675339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
MIP_RAT7.115e-1133.98Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_MOUSE7.115e-1133.98Lens fiber major intrinsic protein OS=Mus musculus... [more]
MIP_SHEEP9.292e-1134.95Lens fiber major intrinsic protein OS=Ovis aries G... [more]
MIP_RANPI9.292e-1135.92Lens fiber major intrinsic protein OS=Rana pipiens... [more]
MIP_BOVIN9.292e-1134.95Lens fiber major intrinsic protein OS=Bos taurus G... [more]
AQP6_RAT9.292e-1138.83Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1[more]
AQP6_MOUSE9.292e-1138.83Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-C06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675339 ID=EY675339; Name=EY675339; organism=Citrus sinensis; type=EST; length=1047bp
CCACGCGTCCGAAAGGATCAGCCTTGGGCGCTGAGATTATTGGTACCTTC
GTGCTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCG
TGACTCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGT
TCATGGTTCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCT
GCTAGGAGCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGA
TGACCATTGGATCTTCTGGGTTGGTCCTTTCGTTGGAGCATTGGCTGCAG
CGGCATACCACCAGTACATCTTGAGGGCTGCTGCTATCAAGGCTTTGGGA
TCATTCCGCAGCAACCCTTCAAACTAAGAAAGCAAATTATGATGAAATAT
GAACCACCAACCAGAATAGCTTTATTTATCTCTTTTTCCTTTCTCTCTTT
CTGTTATTTGTTCCCTTGTGTCTATTATGAGATGATGTTTGCTATGATAA
TTAAGACCCTTCTCTTTATTTTTCCATTTCATATTTTTGGATTGAATTAC
CTAATACTTTTGTCCCCGTGAATCATTGGTAAATGAAAAAGGGGGGAAGG
TTTGGTTTATTCCCAAAAAAAAAAAAAAAAAAGGCCGGTACGCTCCTAAA
GGAATTCAAACCTTAACTTACCCCGTGCACTGGCAAAGTACATAACCCTT
TTAATAAGTGGCCCCCCAAAAATTTCATTTCAATTGGGCCGTTTTTTTTT
CTCCACTCCATGGACGGGGGAAAAAACCCTGGGTGTTTACCCCAAATTAT
AATCCCCCCTTGGGACACATACCCCCCCCTTTTCCCCAACGTGGGGAATA
AATAGCAAAAAAAAACCCCCGCACCATGAATCGCCCTCCTTCCACAAATT
TTTTGCCCACCCCCTATAAAAAGGGGAAAAAGAAGGGAAAACCCCCCCCT
CTTGTACAACAGGCCCCAATATTATAACGAAGGGGGGGTGGGGGGTGGGG
GGGGGGGAATGTATTAACCTCCCCAAAACAGGAGATGATGGCACGCA
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