EY675339

Overview
NameEY675339
Unique NameEY675339
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1047
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 5.572e-48
Identity = 88/111 (79.28%), Postives = 98/111 (88.29%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 344
            KGS LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN D +WDDHW+FWVGPF+GA  AA YH  ++RA   K+
Sbjct:  174 KGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKS 284          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 5.572e-48
Identity = 88/111 (79.28%), Postives = 98/111 (88.29%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 344
            KGS LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN D +WDDHW+FWVGPF+GA  AA YH  ++RA   K+
Sbjct:  174 KGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKS 284          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 191.045 bits (484), Expect = 9.505e-48
Identity = 87/111 (78.38%), Postives = 97/111 (87.39%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 344
            KG  LGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN   AWDDHWIFWVGPF+GA  AA YHQ ++RA   K+
Sbjct:  176 KGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRAIPFKS 286          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 6.161e-47
Identity = 87/111 (78.38%), Postives = 96/111 (86.49%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 344
            KG  LGAEI+GTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA++YN   AW+DHWIFWVGPF+GA  AA YH  I+RA   K+
Sbjct:  176 KGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRSHAWNDHWIFWVGPFIGAALAAIYHVVIIRALPFKS 286          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 8.047e-47
Identity = 87/106 (82.08%), Postives = 96/106 (90.57%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRA 329
            KG  LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN++ AW+DHWIFWVGP +GA  AA YHQ I+RA
Sbjct:  175 KGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIGAALAAIYHQIIIRA 280          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 3.058e-46
Identity = 84/111 (75.68%), Postives = 96/111 (86.49%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 344
            KG  LGAEI+GTF+LVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+++N    W+DHWIFWVGPF+GA  AA YHQ ++RA   K+
Sbjct:  178 KGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 288          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 5.216e-46
Identity = 85/111 (76.58%), Postives = 95/111 (85.59%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 344
            KG  LGAEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA++YN   AW DHWIFWVGPF+GA  AA YH  ++RA   K+
Sbjct:  176 KGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRAHAWHDHWIFWVGPFIGAALAAIYHVVVIRAIPFKS 286          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.982e-45
Identity = 85/111 (76.58%), Postives = 93/111 (83.78%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 344
            KG  LGAE++GTFVLVYTVFSATD KR+ARDSHVP LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IY+N   W  HWIFWVGPF GA  AA YHQ +LRA   K+
Sbjct:  182 KGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAGAALAAVYHQVVLRAIPFKS 292          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.982e-45
Identity = 86/111 (77.48%), Postives = 94/111 (84.68%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 344
            KG  LGAEI+GTF+LVYTVFSATD KR ARDSHVP+LAPLPIGFAVF+VHLAT+ ITGTGINPARS GAAVIYN   AW DHWIFWVGPF+GA  AA YHQ I+RA   K+
Sbjct:  175 KGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 285          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.125e-40
Identity = 83/115 (72.17%), Postives = 90/115 (78.26%), Query Frame = 3
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI--YNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGS 353
            G+ + AE++GTFVLVYTVFSATDPKR ARDSHVPVLAPLPIG AV +VHLATIPITGTGINPARS G A++      KAW   WIFWVGPF GA AA  YH YILR AA KA  S
Sbjct:  158 GAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIYHHYILRGAAAKAFAS 272          
The following BLAST results are available for this feature:
BLAST of EY675339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
PIP11_VICFA5.572e-4879.28Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH5.572e-4879.28Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP12_ORYSJ9.505e-4878.38Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP15_MAIZE6.161e-4778.38Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP1_SOLLC8.047e-4782.08Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP2_PEA3.058e-4675.68Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP13_ORYSJ5.216e-4676.58Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP16_MAIZE1.982e-4576.58Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP11_MAIZE1.982e-4577.48Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP28_ORYSJ1.125e-4072.17Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-C06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675339 ID=EY675339; Name=EY675339; organism=Citrus sinensis; type=EST; length=1047bp
CCACGCGTCCGAAAGGATCAGCCTTGGGCGCTGAGATTATTGGTACCTTC
GTGCTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCG
TGACTCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGT
TCATGGTTCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCT
GCTAGGAGCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGA
TGACCATTGGATCTTCTGGGTTGGTCCTTTCGTTGGAGCATTGGCTGCAG
CGGCATACCACCAGTACATCTTGAGGGCTGCTGCTATCAAGGCTTTGGGA
TCATTCCGCAGCAACCCTTCAAACTAAGAAAGCAAATTATGATGAAATAT
GAACCACCAACCAGAATAGCTTTATTTATCTCTTTTTCCTTTCTCTCTTT
CTGTTATTTGTTCCCTTGTGTCTATTATGAGATGATGTTTGCTATGATAA
TTAAGACCCTTCTCTTTATTTTTCCATTTCATATTTTTGGATTGAATTAC
CTAATACTTTTGTCCCCGTGAATCATTGGTAAATGAAAAAGGGGGGAAGG
TTTGGTTTATTCCCAAAAAAAAAAAAAAAAAAGGCCGGTACGCTCCTAAA
GGAATTCAAACCTTAACTTACCCCGTGCACTGGCAAAGTACATAACCCTT
TTAATAAGTGGCCCCCCAAAAATTTCATTTCAATTGGGCCGTTTTTTTTT
CTCCACTCCATGGACGGGGGAAAAAACCCTGGGTGTTTACCCCAAATTAT
AATCCCCCCTTGGGACACATACCCCCCCCTTTTCCCCAACGTGGGGAATA
AATAGCAAAAAAAAACCCCCGCACCATGAATCGCCCTCCTTCCACAAATT
TTTTGCCCACCCCCTATAAAAAGGGGAAAAAGAAGGGAAAACCCCCCCCT
CTTGTACAACAGGCCCCAATATTATAACGAAGGGGGGGTGGGGGGTGGGG
GGGGGGGAATGTATTAACCTCCCCAAAACAGGAGATGATGGCACGCA
back to top