EY675339

Overview
NameEY675339
Unique NameEY675339
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1047
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.339e-17
Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 3
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 320
            G  L  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARSFG AVI  N   W++HWI+WVGP +GA+ A   ++Y+
Sbjct:  157 GHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.339e-17
Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 3
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 320
            G  L  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARSFG AVI  N   W++HWI+WVGP +GA+ A   ++Y+
Sbjct:  157 GHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 2.283e-17
Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 3
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 320
            G  L  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARSFG AVI  N   W +HWI+WVGP +GA+ A A ++Y+
Sbjct:  157 GHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIYWVGPIMGAVLAGALYEYV 251          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 6.644e-17
Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 3
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 320
            G  L  E+I TF LV+T+F++ D KR+     +     L IG +V + HL  I  TG  +NPARSFG AVI  N   W++HWI+WVGP +GA+ A   ++Y+
Sbjct:  157 GHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.677e-17
Identity = 43/104 (41.35%), Postives = 63/104 (60.58%), Query Frame = 3
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILR 326
            G A+  E + TF+LV  V   +DP R+     +   APL +G ++   HL  I +TG  +NPARSFG AV+ N    W DHW++WVGP VGA+ AA  ++++ +
Sbjct:  142 GQAVLIEALITFILVVVVKGVSDPGRT----DIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQN---MWIDHWVYWVGPIVGAIVAALLYKFVFK 238          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.677e-17
Identity = 49/103 (47.57%), Postives = 61/103 (59.22%), Query Frame = 3
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 323
            G  LG EI+ TF LV  V + TD +R      VP    L IG +V + HL  I  TG G+NPARSFG+AV+  N   +  HWIFWVGP +G  AAA  + +IL
Sbjct:  140 GQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSVP----LAIGLSVALGHLIAIDYTGCGMNPARSFGSAVLTKN---FTYHWIFWVGPMIGGAAAAIIYDFIL 235          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.346e-16
Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = 3
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 323
            G A+  E+I TF L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AV+ N  +    HW+FWVGP VGA+ AA  + Y+L
Sbjct:  129 GKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAMLAAILYFYLL 225          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.253e-15
Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = 3
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 323
            G A+  E+I TF L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AV+ N  +    HW+FWVGP VGA+ AA  + Y+L
Sbjct:  129 GKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAVLAAILYFYLL 225          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.636e-15
Identity = 50/104 (48.08%), Postives = 65/104 (62.50%), Query Frame = 3
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 323
            G A+ AE+I TF L   VFS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AVI +   +   HW+FWVGP VGA  AA  + Y+L
Sbjct:  129 GQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSS--AHWVFWVGPIVGAATAAIIYFYLL 225          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.137e-15
Identity = 48/104 (46.15%), Postives = 64/104 (61.54%), Query Frame = 3
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 323
            G A+  E+I TF L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AV+ N  +    HW+FWVGP VGA  AA  + Y+L
Sbjct:  129 GQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAAVAAILYFYLL 225          
The following BLAST results are available for this feature:
BLAST of EY675339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
AQP4_HUMAN1.339e-1745.10Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_DIPME1.339e-1745.10Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP4_MOUSE2.283e-1746.08Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_BOVIN6.644e-1744.12Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP_HAEIX8.677e-1741.35Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQPA_RANES8.677e-1747.57Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP5_RAT7.346e-1646.15Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP5_MOUSE1.253e-1546.15Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP5_SHEEP1.636e-1548.08Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP5_PIG2.137e-1546.15Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-C06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675339 ID=EY675339; Name=EY675339; organism=Citrus sinensis; type=EST; length=1047bp
CCACGCGTCCGAAAGGATCAGCCTTGGGCGCTGAGATTATTGGTACCTTC
GTGCTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCG
TGACTCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGT
TCATGGTTCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCT
GCTAGGAGCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGA
TGACCATTGGATCTTCTGGGTTGGTCCTTTCGTTGGAGCATTGGCTGCAG
CGGCATACCACCAGTACATCTTGAGGGCTGCTGCTATCAAGGCTTTGGGA
TCATTCCGCAGCAACCCTTCAAACTAAGAAAGCAAATTATGATGAAATAT
GAACCACCAACCAGAATAGCTTTATTTATCTCTTTTTCCTTTCTCTCTTT
CTGTTATTTGTTCCCTTGTGTCTATTATGAGATGATGTTTGCTATGATAA
TTAAGACCCTTCTCTTTATTTTTCCATTTCATATTTTTGGATTGAATTAC
CTAATACTTTTGTCCCCGTGAATCATTGGTAAATGAAAAAGGGGGGAAGG
TTTGGTTTATTCCCAAAAAAAAAAAAAAAAAAGGCCGGTACGCTCCTAAA
GGAATTCAAACCTTAACTTACCCCGTGCACTGGCAAAGTACATAACCCTT
TTAATAAGTGGCCCCCCAAAAATTTCATTTCAATTGGGCCGTTTTTTTTT
CTCCACTCCATGGACGGGGGAAAAAACCCTGGGTGTTTACCCCAAATTAT
AATCCCCCCTTGGGACACATACCCCCCCCTTTTCCCCAACGTGGGGAATA
AATAGCAAAAAAAAACCCCCGCACCATGAATCGCCCTCCTTCCACAAATT
TTTTGCCCACCCCCTATAAAAAGGGGAAAAAGAAGGGAAAACCCCCCCCT
CTTGTACAACAGGCCCCAATATTATAACGAAGGGGGGGTGGGGGGTGGGG
GGGGGGGAATGTATTAACCTCCCCAAAACAGGAGATGATGGCACGCA
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