EY675339

Overview
NameEY675339
Unique NameEY675339
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1047
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 8.404e-12
Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 3
Query:   33 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 308
            EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV   N   +  +W++WVGP V G LA   Y
Sbjct:  145 EIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLVGGGLAGLVY 231          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.404e-12
Identity = 44/94 (46.81%), Postives = 57/94 (60.64%), Query Frame = 3
Query:   33 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 308
            EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV+  +       WI+WVGP V GALA   Y
Sbjct:  146 EIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---LSQIWIYWVGPLVGGALAGLIY 232          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.098e-11
Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 3
Query:   33 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 320
            EII TF LVYTV++ A DPK+ +    +  +AP+ IGF V    L   P +G  +NPARSFG AV   +   + + WI+WVGP VG   A   ++Y+
Sbjct:  145 EIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGD---YTNIWIYWVGPLVGGGLAGLVYRYV 234          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.098e-11
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 3
Query:   33 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 308
            EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV   N   +  +W++WVGP + G LA   Y
Sbjct:  145 EIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLIGGGLAGLVY 231          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.098e-11
Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 3
Query:   33 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 308
            EII TF LVYTV++ A DPK+ +    +  +APL IG  V    LA  P +G  +NPARSFG AV   +   +  HW++WVGP + G LA   Y
Sbjct:  146 EIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FSGHWVYWVGPLIGGGLAGLIY 232          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.098e-11
Identity = 37/101 (36.63%), Postives = 58/101 (57.43%), Query Frame = 3
Query:   18 SALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 320
            +AL  EI+ +   V+ +  ATD +  A        AP+PIG A+ ++HL +IP+T T +NPARS G A ++    A +  W+FW+ P  GAL  A  ++ +
Sbjct:  136 AALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALEQLWLFWLAPIAGALVGALAYRLV 229          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.098e-11
Identity = 37/101 (36.63%), Postives = 58/101 (57.43%), Query Frame = 3
Query:   18 SALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 320
            +AL  EI+ +   V+ +  ATD +  A        AP+PIG A+ ++HL +IP+T T +NPARS G A ++    A +  W+FW+ P  GAL  A  ++ +
Sbjct:  136 AALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALEQLWLFWLAPIAGALVGALAYRLV 229          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVY (Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.434e-11
Identity = 38/101 (37.62%), Postives = 55/101 (54.46%), Query Frame = 3
Query:   18 SALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 320
            SAL  EI+   + +  +  ATD +           AP+ IG  + ++HL +IP+T T +NPARS G A +Y  D A    W+FWV P +GAL  A  ++ I
Sbjct:  132 SALVTEIVMAMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVA-LYVGDWATAQLWLFWVAPILGALLGAVAYKLI 225          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.434e-11
Identity = 38/102 (37.25%), Postives = 52/102 (50.98%), Query Frame = 3
Query:   18 SALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAA-AYHQYI 320
            +AL  E + TF+ +  +   TD    A        AP  IG A+ ++HL +IPIT T +NPARS G A+   N       W+FW+ P  GAL A   YH  +
Sbjct:  141 AALLIEFVLTFIFLIVILGVTDKTAPAG------FAPAAIGLALTLIHLISIPITNTSVNPARSTGVALFCGNPALIGQLWLFWLAPIAGALLAGFVYHNVL 236          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.872e-11
Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 3
Query:   33 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 287
            EII TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV+  +   +  +WI+W GP +G
Sbjct:  146 EIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIG 224          
The following BLAST results are available for this feature:
BLAST of EY675339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
TIP23_MAIZE8.404e-1245.74Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP23_ARATH8.404e-1246.81Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP22_ORYSJ1.098e-1143.30Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP21_ORYSJ1.098e-1144.68Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP21_ARATH1.098e-1145.74Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
AQPZ_BORPA1.098e-1136.63Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]
AQPZ_BORBR1.098e-1136.63Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]
AQPZ_VIBVY1.434e-1137.62Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN... [more]
AQPZ_SYNY31.434e-1137.25Aquaporin Z OS=Synechocystis sp. (strain PCC 6803)... [more]
TIP2_TOBAC1.872e-1145.35Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-C06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675339 ID=EY675339; Name=EY675339; organism=Citrus sinensis; type=EST; length=1047bp
CCACGCGTCCGAAAGGATCAGCCTTGGGCGCTGAGATTATTGGTACCTTC
GTGCTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCG
TGACTCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGT
TCATGGTTCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCT
GCTAGGAGCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGA
TGACCATTGGATCTTCTGGGTTGGTCCTTTCGTTGGAGCATTGGCTGCAG
CGGCATACCACCAGTACATCTTGAGGGCTGCTGCTATCAAGGCTTTGGGA
TCATTCCGCAGCAACCCTTCAAACTAAGAAAGCAAATTATGATGAAATAT
GAACCACCAACCAGAATAGCTTTATTTATCTCTTTTTCCTTTCTCTCTTT
CTGTTATTTGTTCCCTTGTGTCTATTATGAGATGATGTTTGCTATGATAA
TTAAGACCCTTCTCTTTATTTTTCCATTTCATATTTTTGGATTGAATTAC
CTAATACTTTTGTCCCCGTGAATCATTGGTAAATGAAAAAGGGGGGAAGG
TTTGGTTTATTCCCAAAAAAAAAAAAAAAAAAGGCCGGTACGCTCCTAAA
GGAATTCAAACCTTAACTTACCCCGTGCACTGGCAAAGTACATAACCCTT
TTAATAAGTGGCCCCCCAAAAATTTCATTTCAATTGGGCCGTTTTTTTTT
CTCCACTCCATGGACGGGGGAAAAAACCCTGGGTGTTTACCCCAAATTAT
AATCCCCCCTTGGGACACATACCCCCCCCTTTTCCCCAACGTGGGGAATA
AATAGCAAAAAAAAACCCCCGCACCATGAATCGCCCTCCTTCCACAAATT
TTTTGCCCACCCCCTATAAAAAGGGGAAAAAGAAGGGAAAACCCCCCCCT
CTTGTACAACAGGCCCCAATATTATAACGAAGGGGGGGTGGGGGGTGGGG
GGGGGGGAATGTATTAACCTCCCCAAAACAGGAGATGATGGCACGCA
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