EY675338

Overview
NameEY675338
Unique NameEY675338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length959
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9730 contig Csv1_Contig9730:597..1548. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.346e-12
Identity = 46/103 (44.66%), Postives = 60/103 (58.25%), Query Frame = 1
Query:   22 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP-FNGALAAAAYHQYILRAAA 324
            EII TF LVYTV++ A DPK+ +    + V+AP+ IGF V    LA  P +G  +NPARSFG AV   +   +  +WI+W GP   GALA   Y    + A A
Sbjct:  146 EIIITFALVYTVYATAADPKKGS----LGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGD---FSQNWIYWAGPLIGGALAGFIYGDVFITAHA 241          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.676e-12
Identity = 42/96 (43.75%), Postives = 55/96 (57.29%), Query Frame = 1
Query:   22 EIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFNGALAAAAYHQY 306
            E++ TF L+YTV+ +A DPKR A    V  +APL IG  V    L   P  G  +NPA +FG +++      W  HWIFWVGP  GA  AA  ++Y
Sbjct:  148 EVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLV---GWQWHQHWIFWVGPLLGAALAALVYEY 236          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.676e-12
Identity = 39/98 (39.80%), Postives = 56/98 (57.14%), Query Frame = 1
Query:   34 TFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFNGALAAAAYHQYILRAAA 324
            TF L+Y  ++   DPKR     HV  +APL +GF +    LA  P  G G+NPAR FG A++      W  HW++W+GPF GA  A   ++Y++  +A
Sbjct:  157 TFGLMYAYYATVIDPKRG----HVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLGPFVGAGLAGLLYEYLVIPSA 247          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.676e-12
Identity = 43/102 (42.16%), Postives = 58/102 (56.86%), Query Frame = 1
Query:    7 SALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFNGALAAAAYHQYI 309
            +A+  EI+ TF LVYTV++ A DPK+      + ++APL IG  V    L      G  +NPA SFG AV+      W +HW++WVGPF GA  AA  +  I
Sbjct:  143 NAVVFEIVMTFGLVYTVYATAVDPKKG----DIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVV---SWIWTNHWVYWVGPFIGAAIAAIVYDTI 237          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.413e-12
Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 1
Query:    4 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFNGALAAAAYHQYIL 312
            G A+  E++ T  LV  VF++TD ++++            IG +V + HL  I  TG  +NPARSFG A+I      +  HW+FWVGP  GAL A+  + ++L
Sbjct:  142 GQAVAVELLLTLQLVLCVFASTDSRQTSGSPATM------IGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVGPLMGALLASLIYNFVL 235          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.682e-12
Identity = 41/99 (41.41%), Postives = 56/99 (56.57%), Query Frame = 1
Query:   22 EIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP-FNGALAAAAYHQYIL 312
            EII TF L++TV++   DPK+ + D   P+L     GF V    LA    +G  +NPARSFG A++  N   W DHW++WVGP   G LA   Y   ++
Sbjct:  142 EIILTFSLLFTVYATIVDPKKGSLDGFGPLLT----GFVVGANILAGGAFSGASMNPARSFGPALVSGN---WTDHWVYWVGPLIGGGLAGFIYENVLI 233          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.682e-12
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 1
Query:   10 ALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFNGALAAAAYHQYIL 312
            AL  E++ TF LVYTV++    +RS        +APL IG       LA  P  G  +NPAR+FG A++  N   W  HW++W+GP  GA  A A +++++
Sbjct:  151 ALLLEVVMTFGLVYTVYATAVDRRSGGGD----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWN---WRHHWVYWLGPLIGAGMAGALYEFVM 244          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.682e-12
Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 1
Query:   22 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF-NGALAAAAY 297
            EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV+  +   +   WI+WVGP   GALA   Y
Sbjct:  146 EIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVGPLVGGALAGLIY 232          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVU (Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.264e-11
Identity = 38/101 (37.62%), Postives = 55/101 (54.46%), Query Frame = 1
Query:    7 SALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFNGALAAAAYHQYI 309
            SAL  E++ T + +  +  ATD +           AP+ IG  + ++HL +IP+T T +NPARS G A +Y  D A    W+FWV P  GAL  A  ++ I
Sbjct:  132 SALVTEVVMTMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVA-LYVGDWATAQLWLFWVAPILGALLGAVAYKLI 225          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.651e-11
Identity = 38/96 (39.58%), Postives = 53/96 (55.21%), Query Frame = 1
Query:   22 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFNGALAAAAYHQYI 309
            E+ GT +L  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARS GAAV       +  HWI+W+GP  G++ A +  Q +
Sbjct:  181 EMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFIAHVALTAYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGSILAWSVWQLL 269          
The following BLAST results are available for this feature:
BLAST of EY675338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
TIP_ANTMA4.346e-1244.66Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIPA_PHAVU5.676e-1243.75Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
TIP31_ORYSJ5.676e-1239.80Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
TIP13_ARATH5.676e-1242.16Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
AQP6_HUMAN7.413e-1237.86Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
TIP41_ARATH9.682e-1241.41Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
TIP32_ORYSJ9.682e-1238.61Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
TIP22_ARATH9.682e-1245.74Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
AQPZ_VIBVU1.264e-1137.62Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1[more]
AQY1_YEAST1.651e-1139.58Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-C05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675338 ID=EY675338; Name=EY675338; organism=Citrus sinensis; type=EST; length=959bp
AAAGGATCAGCCTTGGGTGCCGAGATTATTGGTACCTTCGTGCTTGTTTA
CACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGACTCTCACG
TGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTTCAC
TTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCTGCTAGGAGCTT
TGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGATGACCATTGGA
TCTTCTGGGTTGGTCCTTTCAATGGAGCATTGGCTGCAGCGGCATACCAC
CAGTACATCTTGAGGGCTGCTGCTATCAAGGCTTTGGGATCATTCCGCAG
CAACCCTTCAAACTAAGAAAGCAAATTATGATGAATATGAACCACCAACC
AGAATAGCTTTATTTATCTCTTTTTCCTTTCTCTCTTTCTGTTATTTTGT
TCGCTTGTGTCTATTATGAGATGATGTTTGCTATGATAATTATGAACCTT
TCTCTTTATTTTTTCCATTTCATATTTTTGATTGAGTAACAATAGCTTTG
TCTCCGTGAATCATTGGTAATGAAGTAATGGTGGATGTTTGTTTTTTTCC
TAAAAAAAAAAAAAAGGGCCGGCCCCTCTAAAGGAATCCAGCTTAATTTA
CCCTGCTTGCCAAGGCCATACCTCTCTCATAATGGACACCAAAATTCAAT
TCACGGGGGCGGCCTTTTAAAAAGTCCCGGGATGGGGAAAAACCTTGGGG
TTTACCCAAATTTAACCCCCCTTGCACCCAATTCCCCCCTTTTCCCCCAA
ATGGGGTATAAAAAAAAAAAAAGCCCCCCCCCCCATAACCCCCCTTTCCC
AAAAGTGTTTACCCCAACCCCGGTAGAAGGGTGGAAAGGGGGGACACCCC
CCTCGCGTGTGCGCGCGCCGCCTATTAATCACCCCGGAGGGGGGGGGTGG
GGGGGTGTG
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