EY675338

Overview
NameEY675338
Unique NameEY675338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length959
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.651e-11
Identity = 37/101 (36.63%), Postives = 58/101 (57.43%), Query Frame = 1
Query:    7 SALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFNGALAAAAYHQYI 309
            +AL  EI+ +   V+ +  ATD +  A        AP+PIG A+ ++HL +IP+T T +NPARS G A ++    A +  W+FW+ P  GAL  A  ++ +
Sbjct:  136 AALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALEQLWLFWLAPIAGALVGALAYRLV 229          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.651e-11
Identity = 37/101 (36.63%), Postives = 58/101 (57.43%), Query Frame = 1
Query:    7 SALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFNGALAAAAYHQYI 309
            +AL  EI+ +   V+ +  ATD +  A        AP+PIG A+ ++HL +IP+T T +NPARS G A ++    A +  W+FW+ P  GAL  A  ++ +
Sbjct:  136 AALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALEQLWLFWLAPIAGALVGALAYRLV 229          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.157e-11
Identity = 42/94 (44.68%), Postives = 56/94 (59.57%), Query Frame = 1
Query:   22 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF-NGALAAAAY 297
            EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV   N   +  +W++WVGP   G LA   Y
Sbjct:  145 EIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLVGGGLAGLVY 231          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.157e-11
Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 1
Query:   22 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF-NGALAAAAY 297
            EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV+  +       WI+WVGP   GALA   Y
Sbjct:  146 EIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---LSQIWIYWVGPLVGGALAGLIY 232          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.157e-11
Identity = 42/94 (44.68%), Postives = 56/94 (59.57%), Query Frame = 1
Query:   22 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP-FNGALAAAAY 297
            EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV   N   +  +W++WVGP   G LA   Y
Sbjct:  145 EIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLIGGGLAGLVY 231          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.157e-11
Identity = 43/94 (45.74%), Postives = 55/94 (58.51%), Query Frame = 1
Query:   22 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP-FNGALAAAAY 297
            EII TF LVYTV++ A DPK+ +    +  +APL IG  V    LA  P +G  +NPARSFG AV   +   +  HW++WVGP   G LA   Y
Sbjct:  146 EIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FSGHWVYWVGPLIGGGLAGLIY 232          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.157e-11
Identity = 38/102 (37.25%), Postives = 52/102 (50.98%), Query Frame = 1
Query:    7 SALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFNGALAAA-AYHQYI 309
            +AL  E + TF+ +  +   TD    A        AP  IG A+ ++HL +IPIT T +NPARS G A+   N       W+FW+ P  GAL A   YH  +
Sbjct:  141 AALLIEFVLTFIFLIVILGVTDKTAPAG------FAPAAIGLALTLIHLISIPITNTSVNPARSTGVALFCGNPALIGQLWLFWLAPIAGALLAGFVYHNVL 236          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.679e-11
Identity = 42/94 (44.68%), Postives = 56/94 (59.57%), Query Frame = 1
Query:   22 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP-FNGALAAAAY 297
            EII TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV+  +   +  +WI+W GP   G LA   Y
Sbjct:  146 EIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIGGGLAGFIY 232          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.679e-11
Identity = 42/94 (44.68%), Postives = 56/94 (59.57%), Query Frame = 1
Query:   22 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP-FNGALAAAAY 297
            EII TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV+  +   +  +WI+W GP   G LA   Y
Sbjct:  146 EIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIGGGLAGFIY 232          
BLAST of EY675338 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVY (Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.679e-11
Identity = 38/101 (37.62%), Postives = 54/101 (53.47%), Query Frame = 1
Query:    7 SALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFNGALAAAAYHQYI 309
            SAL  EI+   + +  +  ATD +           AP+ IG  + ++HL +IP+T T +NPARS G A +Y  D A    W+FWV P  GAL  A  ++ I
Sbjct:  132 SALVTEIVMAMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVA-LYVGDWATAQLWLFWVAPILGALLGAVAYKLI 225          
The following BLAST results are available for this feature:
BLAST of EY675338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
AQPZ_BORPA1.651e-1136.63Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]
AQPZ_BORBR1.651e-1136.63Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]
TIP23_MAIZE2.157e-1144.68Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP23_ARATH2.157e-1145.74Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP21_ORYSJ2.157e-1144.68Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP21_ARATH2.157e-1145.74Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
AQPZ_SYNY32.157e-1137.25Aquaporin Z OS=Synechocystis sp. (strain PCC 6803)... [more]
TIP2_TOBAC3.679e-1144.68Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC3.679e-1144.68Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
AQPZ_VIBVY3.679e-1137.62Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-C05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675338 ID=EY675338; Name=EY675338; organism=Citrus sinensis; type=EST; length=959bp
AAAGGATCAGCCTTGGGTGCCGAGATTATTGGTACCTTCGTGCTTGTTTA
CACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGACTCTCACG
TGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTTCAC
TTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCTGCTAGGAGCTT
TGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGATGACCATTGGA
TCTTCTGGGTTGGTCCTTTCAATGGAGCATTGGCTGCAGCGGCATACCAC
CAGTACATCTTGAGGGCTGCTGCTATCAAGGCTTTGGGATCATTCCGCAG
CAACCCTTCAAACTAAGAAAGCAAATTATGATGAATATGAACCACCAACC
AGAATAGCTTTATTTATCTCTTTTTCCTTTCTCTCTTTCTGTTATTTTGT
TCGCTTGTGTCTATTATGAGATGATGTTTGCTATGATAATTATGAACCTT
TCTCTTTATTTTTTCCATTTCATATTTTTGATTGAGTAACAATAGCTTTG
TCTCCGTGAATCATTGGTAATGAAGTAATGGTGGATGTTTGTTTTTTTCC
TAAAAAAAAAAAAAAGGGCCGGCCCCTCTAAAGGAATCCAGCTTAATTTA
CCCTGCTTGCCAAGGCCATACCTCTCTCATAATGGACACCAAAATTCAAT
TCACGGGGGCGGCCTTTTAAAAAGTCCCGGGATGGGGAAAAACCTTGGGG
TTTACCCAAATTTAACCCCCCTTGCACCCAATTCCCCCCTTTTCCCCCAA
ATGGGGTATAAAAAAAAAAAAAGCCCCCCCCCCCATAACCCCCCTTTCCC
AAAAGTGTTTACCCCAACCCCGGTAGAAGGGTGGAAAGGGGGGACACCCC
CCTCGCGTGTGCGCGCGCCGCCTATTAATCACCCCGGAGGGGGGGGGTGG
GGGGGTGTG
back to top