EY675320

Overview
NameEY675320
Unique NameEY675320
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.860e-20
Identity = 53/123 (43.09%), Postives = 71/123 (57.72%), Query Frame = 3
Query:   12 DVPIRVYQNSGRA--PFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC-PVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 368
            D+P+R ++N       +P  QPM +YS+LW AD WATRGGL K DWSKAPF A YR+F  + C    G ++C +    W+     Q L      + R V+  +MIY+YCTD  R+P   P EC
Sbjct:  164 DIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTASYRNFRADACVSSGGRSSCPAGSPRWFS----QRLDLTAEDKMRVVQRKYMIYNYCTDTKRFPQGFPKEC 282          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.614e-18
Identity = 49/125 (39.20%), Postives = 71/125 (56.80%), Query Frame = 3
Query:   18 PIRVYQN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCAS--NP---GNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYP-VPPPEC 368
            PIRV++N  S    +P  Q M V+++LW A+DWAT+GG  K +W+ APF A  R +    C   G  +     +P    NWW + ++  LTA +  + + +R   MIYDYC D +R+  V PPEC
Sbjct:  163 PIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWATQGGRVKTNWTLAPFVAEGRRYKARACLWKGSVSIKQCVDPTIRSNWWTSPSFSQLTASQLTKMQKIRDGFMIYDYCKDTNRFKGVMPPEC 287          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.513e-17
Identity = 47/125 (37.60%), Postives = 70/125 (56.00%), Query Frame = 3
Query:   12 DVPIR-VYQNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPG----PANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECL 371
            DVPIR V +N         +PM +Y+T+W+A DWAT GG  K ++  APF A ++ F ++GC V      P +C S+  ++ E+ +Y ++ + +    R  R   M Y YC D  RYP P PEC+
Sbjct:  171 DVPIREVIRNDAMGADYPAKPMALYATIWDASDWATSGGKYKANYKFAPFVAEFKSFSLDGCSVDPIQEVPMDC-SDSVDFLESQDYSSINSHQRAAMRRFRQRFMYYSYCYDTLRYPEPLPECV 294          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.629e-16
Identity = 43/119 (36.13%), Postives = 61/119 (51.26%), Query Frame = 3
Query:   12 DVPIRVYQNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 368
            DVPIR Y     A FP  +PM VY ++W+A DWAT  G  K D+   PF A Y++F + GC     ++C   P +     N + L+  +     W + N ++Y+YC D  R     PEC
Sbjct:  179 DVPIRTYNRKNEAIFP-TRPMWVYGSIWDASDWATENGRIKADYRYQPFVAKYKNFKLAGCTADSSSSC--RPPSPAPMRN-RGLSRQQMAALTWAQRNFLVYNYCHDPKRDHTQTPEC 293          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.740e-16
Identity = 48/137 (35.04%), Postives = 74/137 (54.01%), Query Frame = 3
Query:   12 DVPIR--VYQNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV----PGPANCASNPGNW-----------WEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECL 371
            DVPIR  + +      +P  +PM +Y+T+W+A  WAT GG   +D++ +PF + ++D  ++GC V    PG  N  +N GN+             +N+Y  ++  +A   R  R  +M Y YC D  RY VPPPEC+
Sbjct:  179 DVPIREILRKEEMNGDYPQ-KPMSLYATIWDASSWATSGGKFGVDYTFSPFVSEFKDIALDGCNVSDSFPGENN-NNNIGNYNNINCSVSDQFLMSNDYSTISPKQATAMRRFRERYMYYSYCYDTIRYSVPPPECV 313          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.085e-16
Identity = 46/138 (33.33%), Postives = 71/138 (51.45%), Query Frame = 3
Query:   18 PIRVYQNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC----------------PVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPECLA 374
            PIR ++N       +P NQPM +Y +LW ADDWATRGGL K +WS+ PF A + +++ E                  P    ++ +S+   W+   + + + +   +  RWV+   M+Y+YC DK R+    P EC A
Sbjct:  164 PIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTNWSQGPFVASFMNYNSENACVWSIVNGTTTTSPCSPGDSTSSSSSSTSEWF---SQRGMDSSSKKVLRWVQRKFMVYNYCKDKKRFSNGLPVECTA 298          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.379e-15
Identity = 44/126 (34.92%), Postives = 60/126 (47.62%), Query Frame = 3
Query:   12 DVPIRVYQNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN------CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 368
            DVP+R ++      +P ++PM +++TLW+   WATR G  KIDWS APF   YR +    C    PA       C      W     ++ L   E     W   N+M Y+YC D  R+P   P EC
Sbjct:  166 DVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACVNNNPAGGWSSSWCPEGTSAW----IHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAEC 287          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.939e-15
Identity = 41/119 (34.45%), Postives = 60/119 (50.42%), Query Frame = 3
Query:   12 DVPIRVYQNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 368
            D+PIR Y     + FP+ +PM +Y ++W+A  WAT  G  K D+   PF A Y +F   GC     A C     + + +     LT  + +  RWV+ + M+Y+YC D  R     PEC
Sbjct:  183 DIPIRRYPKKSASTFPL-RPMWLYGSIWDASSWATEDGKYKADYKYQPFTAKYTNFKALGCTAYSSARCYPLSASPYRSG---GLTRQQHQAMRWVQTHSMVYNYCKDYKRDHSLTPEC 297          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.436e-14
Identity = 40/131 (30.53%), Postives = 66/131 (50.38%), Query Frame = 3
Query:   12 DVPIRVYQNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV-----PGPANCASNPGNW-----WEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 368
            ++P+R + N G   + +P ++PM +Y T+W+  +WAT+GG   +++  APF     D ++ GC V      G   C  + G+       +  ++  L+  +     W R   M Y YC+DK RY V P EC
Sbjct:  180 NIPVRQFPNRGAFTSAYP-SKPMSLYVTVWDGSEWATKGGKYPVNYKYAPFVVSVADVELSGCSVNNGSSTGSGPCTKSGGSISSLDPVDGQDFATLSKNQINAMDWARRKLMFYSYCSDKPRYKVMPAEC 309          
The following BLAST results are available for this feature:
BLAST of EY675320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
XTH25_ARATH1.860e-2043.09Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH26_ARATH6.614e-1839.20Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH30_ARATH2.513e-1737.60Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH31_ARATH3.629e-1636.13Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH29_ARATH4.740e-1635.04Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH21_ARATH8.085e-1633.33Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ORYSJ1.379e-1534.92Xyloglucan endotransglycosylase/hydrolase protein ... [more]
XTH32_ARATH8.939e-1534.45Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH33_ARATH4.436e-1430.53Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-A09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675320 ID=EY675320; Name=EY675320; organism=Citrus sinensis; type=EST; length=932bp
CCACGCGTCCGGATGTGCCCATCAGGGTTTACCAAAACAGTGGAAGGGCT
CCATTTCCAATGAACCAACCCATGGGGGTGTATTCGACGCTGTGGGAAGC
AGATGACTGGGCAACAAGAGGTGGTCTAGAGAAAATAGATTGGAGCAAAG
CTCCTTTTTATGCTTATTACAGAGACTTTGATATTGAGGGCTGCCCAGTT
CCTGGACCAGCAAACTGTGCCTCGAACCCAGGTAACTGGTGGGAGGCAAA
TAATTATCAAGCCCTCACCGCCATGGAAGCAAGAAGATACAGATGGGTTC
GTCTCAACCACATGATCTATGATTATTGCACTGATAAATCAAGATACCCA
GTACCCCCACCGGAATGCCTTGCCGGCATATAAATTCAACCCGCCAATTA
ATTAAGCAGTTGGACGGTACTCCATATCCGTATCATATCATGTATATTAC
TTCACGTACACGTCCCTTTGTATTATTCCCTATTCTTGTGAAAAAGACTT
ATACGCATATCAAGGGAGGGGGCGGAGGGAAAAAATAAAACATTGGTGGG
CTTTTAATTGTGATTATGGGAGTGGGAAATATGTGGGTATTCCTGGCTCC
CTTGGTACCCATATATAAGTCCGAAATTTGAAGCCCAGTATTCTGTGCCA
ATAAGAGCCCTCCTTTCTTATTGTGGGAAAAAAATAAATATAAAAAAGAA
TAAAAAGAGAAGAAGAAGTTCATATTGCACAATTGAAAATGAGATAAAAG
TTATGATATGAAACGTATTTGGATTGATGAGTATAAGGGGGGGGCGCCCT
CTGAAGGGAATCAGTTCTTAGTGCCCGGGCGGCGGGGAAGTCATACCTCT
CTTATAATGGTGCCAAAAAATTTATTTCTCGGGGCGCGGTTTTTAACCCA
GTATGGGGGGGAGAAAAACCCTGCGTGCTCAC
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