EY675319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 5.160e-38 Identity = 76/118 (64.41%), Postives = 90/118 (76.27%), Query Frame = 1 Query: 1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 354 LGNP+L HAQ+I+A A QV+LMG +EGYR+ +FDPLGLADDPD FAELKVKE+KNGRLA FSMFGFFVQAIVTGKGP++NL DH+A+P NNA+A+AT F P Sbjct: 134 LGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 4.368e-37 Identity = 78/118 (66.10%), Postives = 88/118 (74.58%), Query Frame = 1 Query: 1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 354 LG+P L HAQ+I+A A QVVLMG +EGYR+ +FDPLGLADDPD FAELKVKE+KNGRLAMFS FGFFVQAIVTGKGPI+NL DH+ADP NNA+A AT F P Sbjct: 137 LGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 5.903e-34 Identity = 76/121 (62.81%), Postives = 83/121 (68.60%), Query Frame = 1 Query: 1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXA--FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 357 LGN +L HAQSI+A A QVVLMG E YR FDPLGLADDPD FAELKVKE+KNGRLAMFS GFFVQAIVTGKGP++NL DH+ADP N A+A AT F PG Sbjct: 132 LGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.480e-32 Identity = 75/119 (63.03%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 357 LGNP+L HAQSILAIW +V+LMG VEGYRI +FD LGLA+D + FAELKVKELKNGRLAMFSMFGFFVQAIV+ K +ENL DH+ V NNA + TNFVPG Sbjct: 150 LGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYPG-SFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPG 267
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.937e-25 Identity = 65/117 (55.56%), Postives = 74/117 (63.25%), Query Frame = 1 Query: 16 LTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXA---FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNA-WAYATNFVP 354 L HA+S+LAI A QV+LMG VEGYR FDPLGLADDPD F ELKVKE+KNGRLAM M GF+ QAIVTG+GP+EN H+ DP A+N A T F P Sbjct: 5 LIHAKSLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTALVTQFAP 121
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.715e-20 Identity = 54/97 (55.67%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 34 ILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 324 +LA+ A +VVL+G E YRI FDPLGLA DP+Q A LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENL H++DP NN Sbjct: 172 VLAVVA-EVVLLGGAEYYRITNGLDFEDKLHPGGP--FDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.699e-15 Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 1 Query: 145 FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 324 F+PLG D ELK+KE+KNGRLAM ++ G+F+QA+VTG GP +NL DH+ADPV NN Sbjct: 206 FNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 265
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.367e-14 Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 145 FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 324 F+PLG D ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DH+ADPV NN Sbjct: 208 FNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNN 267
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.786e-14 Identity = 39/61 (63.93%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQF 183 LGNPNL HAQSILAIWACQVVLMG VEGYR+ AFDPLGLA+DP+ F Sbjct: 145 LGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGLAEDPEAF 205
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 7.502e-13 Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 142 AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLYDHIADPVANN 324 AFDPLG + DP +F ELK+KE+KNGRLAM + GF V Q+ G GP+ENL H+ADP NN Sbjct: 171 AFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 232 The following BLAST results are available for this feature:
BLAST of EY675319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675319 ID=EY675319; Name=EY675319; organism=Citrus sinensis; type=EST; length=1037bpback to top |