EY675312
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.325e-15 Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 152 IQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 + A +ILAIWAC+ LMG VE Y I GG G+ + PLYPGG++DP A++P+ FAELK E+ NGR Sbjct: 154 VHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGR 220 HSP 2 Score: 25.7942 bits (55), Expect = 5.325e-15 Identity = 14/30 (46.67%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKD 443 LAM S+ GF V AI K PL+ + I D Sbjct: 221 LAMFSMFGFFVQAIVTGKGPLENLADHIAD 250
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.995e-15 Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 152 IQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 + A +ILAIWAC+ LMG VE Y I GG G+ + PLYPGG++DP A++P+ FAELK E+ NGR Sbjct: 152 VHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGR 218 HSP 2 Score: 25.0238 bits (53), Expect = 8.995e-15 Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKD 443 LAM S+ GF V AI K PL+ + + D Sbjct: 219 LAMFSMFGFFVQAIVTGKGPLENLADHLAD 248
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.995e-15 Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 152 IQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 + A +ILAIWAC+ LMG VE Y I GG G+ + PLYPGG++DP A++P+ FAELK E+ NGR Sbjct: 152 VHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGR 218 HSP 2 Score: 25.0238 bits (53), Expect = 8.995e-15 Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKD 443 LAM S+ GF V AI K PL+ + + D Sbjct: 219 LAMFSMFGFFVQAIVTGKGPLENLADHLAD 248
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.659e-15 Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 152 IQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 + A +ILAIWAC+ LMG VE Y I GG G+ + PLYPGG++DP A++P+ FAELK E+ NGR Sbjct: 3 VHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGR 69 HSP 2 Score: 25.0238 bits (53), Expect = 9.659e-15 Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKD 443 LAM S+ GF V AI K PL+ + + D Sbjct: 70 LAMFSMFGFFVQAIVTGKGPLENLADHLAD 99
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.215e-13 Identity = 39/77 (50.65%), Postives = 49/77 (63.64%), Query Frame = 2 Query: 125 LHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNP-GKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 L YLGNP + A +ILAIWA + LMG VE Y + G P G+ LYPGG++DP +P+ FAELK E+ NGR Sbjct: 1 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLASLTDPEAFAELKVKEIKNGR 77 HSP 2 Score: 25.0238 bits (53), Expect = 2.215e-13 Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKD 443 LAM S+ GF V AI K PL+ + + D Sbjct: 78 LAMFSMFGFFVQAIVTGKGPLENLADHLAD 107 The following BLAST results are available for this feature:
BLAST of EY675312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675312 ID=EY675312; Name=EY675312; organism=Citrus sinensis; type=EST; length=1025bpback to top |