EY675309

Overview
NameEY675309
Unique NameEY675309
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1079
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675309 vs. ExPASy Swiss-Prot
Match: CAT1_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.035e-28
Identity = 70/144 (48.61%), Postives = 88/144 (61.11%), Query Frame = 3 
Query:  231 SLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPNV--IPAFKPNPKSHIQKYWKD 656
            +L   SRG  LL+D    E +  F RER+PER VHARG  A G F    D S+LT A    A G  TP + RFSTV   RGS +T RD  GFA +FY  EGN+D++GN+IPVFFI D I  P +  + A KPNP+ H+ +  +D
Sbjct:   30 TLGAASRGATLLQDLLFTEIIFAFDRERVPERAVHARGTGAHGTFLSYEDWSNLTAASFLSAEGKFTPEMTRFSTVSGARGSADTARDVHGFATRFYVDEGNFDIVGNNIPVFFIWDVIIEPTLMALHAQKPNPRFHLPRGQQD 173
The following BLAST results are available for this feature:
BLAST of EY675309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CAT1_PENJA1.035e-2848.61Catalase OS=Penicillium janthinellum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-H09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675309 ID=EY675309; Name=EY675309; organism=Citrus sinensis; type=EST; length=1079bp
TTTTTTTTTTTTACGGGATCTGCAGTACGGTCCGGATTCCGGGTCGACCA
CGCGTCCGTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACGAT
AATAATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCCCT
ACAAATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAAAT
GCCGGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGTAG
AGGTCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCATT
TTGCCAGGGAGAGGATTCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGT
GCTAAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGC
TGATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCT
CCACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGA
GGATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGG
TAACAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAAATG
TGATCCCTGCTTTTAAACCTAATCCAAAGTCTCACATCCAAAAGTACTGG
AAGGATCGTCGACTTCTCCTCCCACCTCCTGAAAACCTGGCCACCATTTT
CCGGGTTCTTTAAGGAGGGGGGTATCCCAAAAAAATTAAGGCCCATGGAA
AGGCTTCGGTGTTCAAACTTTTAACCGGGGCAAAAAAAATGGGGAAAAGG
CCCCTATGGGAAAATCCCCGGGAAAACAAACTTTGGGGAATTAAGTGTTT
TAAAAAAAAAAAAAAAAAAACCAAAAAAAGGGGGGGGGGGGAATTAAAAT
CCACCCCCCCCCTACACCCGGGATTTTCTCAAAAAACAAAAATTTGGCGC
GCGGGGGAAAACATTTCCCGTTAAGGGGGAAAACTCCTCCCTTTTTTTTA
AAAAAATTATTTTATTTCCCCCATCAACAAGAGAAGAAAAAAAAAAATAT
TTTTTAACTCTTCTTTTTCACCCCACCCC
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