EY656932

Overview
NameEY656932
Unique NameEY656932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY656932 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.744e-31
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 1
Query:   79 MQIFVKTLTGKTITLEVEISDTIDNV*AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIRKESTLHLVLRLRGG 306
            MQIFVKTLTGKTI LEVE SDTI+NV AKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNI+KESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 62.3882 bits (150), Expect = 7.582e-11
Identity = 32/50 (64.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query:  307 MLIFVKTLTGRTITLEGESSDTIKNVKGKIAGKEGIRPEGERLFLPGQAL 456
            M IFVKTLTG+TI LE E SDTI+NVK KI  KEGI P+ +RL   G+ L
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 50          

HSP 3 Score: 26.1794 bits (56), Expect = 7.582e-11
Identity = 12/26 (46.15%), Postives = 15/26 (57.69%), Query Frame = 2
Query:  458 EEGRPPDNYNTPKGTLAHLGIHLGGG 535
            EEGR   +YN  K +  HL + L GG
Sbjct:   51 EEGRTLSDYNIQKESTLHLVLRLRGG 76          
BLAST of EY656932 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.612e-30
Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 1
Query:   79 MQIFVKTLTGKTITLEVEISDTIDNV*AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIRKESTLHLVLRLRGG 306
            MQIFVKTLTG TI LEVE SDTI+NV AKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNI+KESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76          
BLAST of EY656932 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.882e-26
Identity = 59/76 (77.63%), Postives = 66/76 (86.84%), Query Frame = 1
Query:   79 MQIFVKTLTGKTITLEVEISDTIDNV*AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIRKESTLHLVLRLRGG 306
            MQIFVKTLTGKTIT+E E  DT+  V  KI DKEG+P DQQRLI+AGKQLED +TLADYNI+KESTLH+VLRLRGG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76          
BLAST of EY656932 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.868e-25
Identity = 56/76 (73.68%), Postives = 67/76 (88.16%), Query Frame = 1
Query:   79 MQIFVKTLTGKTITLEVEISDTIDNV*AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIRKESTLHLVLRLRGG 306
            MQIF+KTLTGKTIT E E ++T+ ++  KI DKEG+P DQQRLIFAGKQLED +T+ADYNI+KESTLH+VLRLRGG
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76          
BLAST of EY656932 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 7.099e-25
Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 1
Query:  112 TITLEVEISDTIDNV*AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIRKESTLHLVLRLR 300
            TITLEVE SDTI+NV AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNI+KESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63          
BLAST of EY656932 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.928e-19
Identity = 47/74 (63.51%), Postives = 57/74 (77.03%), Query Frame = 1
Query:   85 IFVKTLTGKTITLEVEISDTIDNV*AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIRKESTLHLVLRLRGG 306
            I VKTLTGK I +++E +DTID V  ++++KEGIPP QQRLI+AGKQL D +T  DYNI   S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76          
BLAST of EY656932 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.297e-18
Identity = 46/74 (62.16%), Postives = 57/74 (77.03%), Query Frame = 1
Query:   85 IFVKTLTGKTITLEVEISDTIDNV*AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIRKESTLHLVLRLRGG 306
            I VKTLTGK I +++E +DTID +  ++++KEGIPP QQRLI+AGKQL D +T  DYNI   S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76          
BLAST of EY656932 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.297e-18
Identity = 46/74 (62.16%), Postives = 57/74 (77.03%), Query Frame = 1
Query:   85 IFVKTLTGKTITLEVEISDTIDNV*AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIRKESTLHLVLRLRGG 306
            I VKTLTGK I +++E +DTID +  ++++KEGIPP QQRLI+AGKQL D +T  DYNI   S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76          
BLAST of EY656932 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.297e-18
Identity = 46/74 (62.16%), Postives = 57/74 (77.03%), Query Frame = 1
Query:   85 IFVKTLTGKTITLEVEISDTIDNV*AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIRKESTLHLVLRLRGG 306
            I VKTLTGK I +++E +DTID +  ++++KEGIPP QQRLI+AGKQL D +T  DYNI   S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76          
BLAST of EY656932 vs. ExPASy Swiss-Prot
Match: RUB2_ARATH (NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN=RUB2 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.212e-18
Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 1
Query:   85 IFVKTLTGKTITLEVEISDTIDNV*AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIRKESTLHLVLRLRGGML 312
            I VKTLTGK I +++E +DTID +  ++++KEGIPP QQRLI+AGKQL D +T  DY I   S LHLVL LRGG+L
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGLL 78          
The following BLAST results are available for this feature:
BLAST of EY656932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
UBIQ_LEIMA1.744e-3190.79Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1[more]
UBIQ_LEITA5.612e-3088.16Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3... [more]
UBIL_NPVOP2.882e-2677.63Ubiquitin-like protein OS=Orgyia pseudotsugata mul... [more]
UBIL_NPVAC1.868e-2573.68Ubiquitin-like protein OS=Autographa californica n... [more]
UBIQ_LUMTE7.099e-2592.06Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 ... [more]
RUB1_DESAN9.928e-1963.51NEDD8-like protein RUB1 OS=Deschampsia antarctica ... [more]
RUB2_ORYSJ1.297e-1862.16NEDD8-like protein RUB2 OS=Oryza sativa subsp. jap... [more]
RUB1_ORYSJ1.297e-1862.16NEDD8-like protein RUB1 OS=Oryza sativa subsp. jap... [more]
RUB1_ARATH1.297e-1862.16NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN... [more]
RUB2_ARATH2.212e-1860.53NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-060-C01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY656932 ID=EY656932; Name=EY656932; organism=Citrus sinensis; type=EST; length=910bp
ATTAAACCAATAAACCACCCTTTTGAGGGGAAAGATATTTAGTTTAGATA
GNGAGGCCCCCTTTGAGAGCCTTCCAACATGCAGATCTTTGTGAAAACTT
TGACCGGCAAGACCATCACTCTCGAGGTGGAGATCTCCGACACGATCGAC
AACGTCTAGGCTAAGATCCAGGACAAGGAAGGGATTCCACCGGACCAGCA
GCGGCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGGCGCACCTTGGCGG
ATTACAACATCCGGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCGC
GGCGGCATGCTGATCTTCGTCAAGACTCTGACCGGGAGGACGATCACCCT
GGAGGGGGAAAGCTCCGACACGATCAAAAACGTGAAGGGGAAGATCGCTG
GAAAGGAAGGGATCCGCCCGGAGGGGGAGAGGCTCTTCCTTCCCGGGCAG
GCACTGGGAGGAAGGCCGACCCCCGGACAATTATAACACTCCGAAAGGAA
CCCTTGCTCACCTTGGGATTCACCTGGGGGGGGGAAAGGAGATTTTCGGC
CGGAACTTAACCGGGAAAAAAACCCCCGGCAGGGGAGAGCGCCGAGACAG
AGGAACACAGAAAGCCAAAAAAAGGGAAAAGACGGGGATCCCCCAGAGAA
TGACGAGACACCCATCAGGGGGAGAAAATAAAGGAGAGCGAGACGCACGC
AGTAAAACCGTCAGGAGGGAGGCACGTCCCAAATTTCTTCACTACGAGGG
GGAGAGAGTAAAGAAAAATAAGGAAAAACGGAGTAGGTATATAAACGGGT
CTGAGAAAAAAAATTGGTTATAGGGCGAGAGGGTGATGTTAGGTTTAAAT
TGCGAGTTTGAGGGAGCTATCGGGACGTGTAGTCTCCATTCTTAAGATTG
TCAGAGACTT
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