EY675276

Overview
NameEY675276
Unique NameEY675276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1004
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDXS_THEMA (Pyridoxal biosynthesis lyase pdxS OS=Thermotoga maritima GN=pdxS PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.890e-59
Identity = 108/155 (69.68%), Postives = 130/155 (83.87%), Query Frame = 2
Query:  101 ETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 565
            E KK  + +K G A+M +GGVIMDV + EQA++AEEAGA AVMALERVPADIR +GGVARM+    I+EI ++V+IPVMAK RIGH  EA+ILE +G+D++DESEVLTPAD+  HINKH F++PFVCG R+LGEALRRI EGAAMIRTKGEAGTG
Sbjct:    2 EIKKGTWIIKKGFAEMFKGGVIMDVTSAEQAKIAEEAGAVAVMALERVPADIRKEGGVARMASIAKIREIMEAVSIPVMAKVRIGHIAEAKILEELGVDFIDESEVLTPADDRFHINKHEFKVPFVCGARDLGEALRRIAEGAAMIRTKGEAGTG 156          

HSP 2 Score: 28.8758 bits (63), Expect = 2.890e-59
Identity = 11/28 (39.29%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  562 GDIIETGKHVRAVMGDIRVLKKMDKDEV 645
            G+++E  KH+R VM  I+ + KM+ +E+
Sbjct:  156 GNVVEAVKHMRRVMEQIKQVTKMEDEEL 183          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDXS_BACLD (Pyridoxal biosynthesis lyase pdxS OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pdxS PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 3.768e-59
Identity = 107/147 (72.79%), Postives = 131/147 (89.12%), Query Frame = 2
Query:  125 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 565
            VK G+A+M +GGVIMDVV  EQA++AEEAGA AVMALERVPADIR+ GGVARM+DP +++E+  +V+IPVMAKARIGH VEA++LEA+G+DY+DESEVLTPADEE H+NK+ F +PFVCGCR+LGEA RRI EGA+M+RTKGE GTG
Sbjct:    9 VKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEALGVDYIDESEVLTPADEEFHLNKNEFTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTG 155          

HSP 2 Score: 24.6386 bits (52), Expect = 3.768e-59
Identity = 10/28 (35.71%), Postives = 17/28 (60.71%), Query Frame = 1
Query:  562 GDIIETGKHVRAVMGDIRVLKKMDKDEV 645
            G+I+E  +H+R V   +R +  M  DE+
Sbjct:  155 GNIVEAVRHMRKVNAQVRKVVGMSDDEL 182          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDXS_LISMO (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes GN=pdxS PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 3.768e-59
Identity = 107/155 (69.03%), Postives = 134/155 (86.45%), Query Frame = 2
Query:  101 ETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 565
            E K     VK G+AQM +GGVIMDVV  EQA++AEEAGA AVMALERVP+DIR+ GGVARM+DP++++E+ ++V+IPVMAKARIGH  EA++LEA+G+DY+DESEVLTPAD+E H+ K +F +PFVCGCR++GEALRRI EGAAM+RTKGE GTG
Sbjct:    2 EKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMKAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTG 156          

HSP 2 Score: 27.7202 bits (60), Expect = 3.768e-59
Identity = 12/28 (42.86%), Postives = 18/28 (64.29%), Query Frame = 1
Query:  562 GDIIETGKHVRAVMGDIRVLKKMDKDEV 645
            G+I+E  +H+R V G IR +  M  DE+
Sbjct:  156 GNIVEAVRHMRQVNGQIRQIAGMTDDEL 183          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDXS_NATTJ (Pyridoxal biosynthesis lyase pdxS OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=pdxS PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.898e-59
Identity = 111/153 (72.55%), Postives = 136/153 (88.89%), Query Frame = 2
Query:  107 KKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 565
            +K   +VK G+AQM +GGVIMDV TPEQA++AE+AGA AVMALE+VPADIR+ GGVARM+DP++IK+I  +V+IPVMAKARIGHFVEA+ILE +G+DY+DESEVLTPADE  HI+K+ F +PFVCG RNLGEALRR+ EGA+M+RTKGEAGTG
Sbjct:    4 EKGTETVKKGMAQMQKGGVIMDVTTPEQAKIAEKAGAVAVMALEKVPADIRAGGGVARMADPEVIKKIMDAVSIPVMAKARIGHFVEARILENLGVDYIDESEVLTPADEYYHIDKNKFTVPFVCGARNLGEALRRVGEGASMMRTKGEAGTG 156          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDXS_LISMH (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=pdxS PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 4.913e-59
Identity = 107/155 (69.03%), Postives = 133/155 (85.81%), Query Frame = 2
Query:  101 ETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 565
            E K     VK G+AQM +GGVIMDVV  EQA++AEEAGA AVMALERVP+DIR+ GGVARM+DP++++E+  +V+IPVMAKARIGH  EA++LEA+G+DY+DESEVLTPAD+E H+ K +F +PFVCGCR++GEALRRI EGAAM+RTKGE GTG
Sbjct:    2 EKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTG 156          

HSP 2 Score: 27.7202 bits (60), Expect = 4.913e-59
Identity = 12/28 (42.86%), Postives = 18/28 (64.29%), Query Frame = 1
Query:  562 GDIIETGKHVRAVMGDIRVLKKMDKDEV 645
            G+I+E  +H+R V G IR +  M  DE+
Sbjct:  156 GNIVEAVRHMRQVNGQIRQIAGMTDDEL 183          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDXS_LISMF (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes serotype 4b (strain F2365) GN=pdxS PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 4.913e-59
Identity = 107/155 (69.03%), Postives = 133/155 (85.81%), Query Frame = 2
Query:  101 ETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 565
            E K     VK G+AQM +GGVIMDVV  EQA++AEEAGA AVMALERVP+DIR+ GGVARM+DP++++E+  +V+IPVMAKARIGH  EA++LEA+G+DY+DESEVLTPAD+E H+ K +F +PFVCGCR++GEALRRI EGAAM+RTKGE GTG
Sbjct:    2 EKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTG 156          

HSP 2 Score: 27.7202 bits (60), Expect = 4.913e-59
Identity = 12/28 (42.86%), Postives = 18/28 (64.29%), Query Frame = 1
Query:  562 GDIIETGKHVRAVMGDIRVLKKMDKDEV 645
            G+I+E  +H+R V G IR +  M  DE+
Sbjct:  156 GNIVEAVRHMRQVNGQIRQIAGMTDDEL 183          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDXS_LISMC (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=pdxS PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 4.913e-59
Identity = 107/155 (69.03%), Postives = 133/155 (85.81%), Query Frame = 2
Query:  101 ETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 565
            E K     VK G+AQM +GGVIMDVV  EQA++AEEAGA AVMALERVP+DIR+ GGVARM+DP++++E+  +V+IPVMAKARIGH  EA++LEA+G+DY+DESEVLTPAD+E H+ K +F +PFVCGCR++GEALRRI EGAAM+RTKGE GTG
Sbjct:    2 EKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTG 156          

HSP 2 Score: 27.7202 bits (60), Expect = 4.913e-59
Identity = 12/28 (42.86%), Postives = 18/28 (64.29%), Query Frame = 1
Query:  562 GDIIETGKHVRAVMGDIRVLKKMDKDEV 645
            G+I+E  +H+R V G IR +  M  DE+
Sbjct:  156 GNIVEAVRHMRQVNGQIRQIAGMTDDEL 183          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDXS_BACSU (Pyridoxal biosynthesis lyase pdxS OS=Bacillus subtilis GN=pdxS PE=1 SV=3)

HSP 1 Score: 224.172 bits (570), Expect = 6.405e-59
Identity = 105/147 (71.43%), Postives = 131/147 (89.12%), Query Frame = 2
Query:  125 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 565
            VK G+A+M +GGVIMDV+  EQA++AEEAGA AVMALERVPADIR+ GGVARM+DP +++E+  +V+IPVMAKARIGH VEA++LEA+G+DY+DESEVLTPADEE H+NK+ + +PFVCGCR+LGEA RRI EGA+M+RTKGE GTG
Sbjct:    9 VKRGMAEMQKGGVIMDVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTG 155          

HSP 2 Score: 25.7942 bits (55), Expect = 6.405e-59
Identity = 10/28 (35.71%), Postives = 18/28 (64.29%), Query Frame = 1
Query:  562 GDIIETGKHVRAVMGDIRVLKKMDKDEV 645
            G+I+E  +H+R V   +R +  M +DE+
Sbjct:  155 GNIVEAVRHMRKVNAQVRKVVAMSEDEL 182          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDXS_ANOFW (Pyridoxal biosynthesis lyase pdxS OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 6.405e-59
Identity = 107/147 (72.79%), Postives = 131/147 (89.12%), Query Frame = 2
Query:  125 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 565
            VK G+A+M +GGVIMDVV  EQA++AE AGA AVMALERVPADIR+ GGVARM+DP +I+E+ ++V+IPVMAKARIGH+VEA++LEA+G+DY+DESEVLTPADEE HI+K  F +PFVCGCR+LGEA RRI EGA+M+RTKGE GTG
Sbjct:    9 VKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVARMADPTVIEEVMKAVSIPVMAKARIGHYVEARVLEALGVDYIDESEVLTPADEEFHIDKRQFTVPFVCGCRDLGEAARRIAEGASMLRTKGEPGTG 155          

HSP 2 Score: 26.1794 bits (56), Expect = 6.405e-59
Identity = 10/28 (35.71%), Postives = 18/28 (64.29%), Query Frame = 1
Query:  562 GDIIETGKHVRAVMGDIRVLKKMDKDEV 645
            G+I+E  +H+R V   +R +  M +DE+
Sbjct:  155 GNIVEAVRHMRKVNAQVRKVVSMSEDEL 182          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDXS_THEP1 (Pyridoxal biosynthesis lyase pdxS OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=pdxS PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 6.406e-59
Identity = 108/155 (69.68%), Postives = 130/155 (83.87%), Query Frame = 2
Query:  101 ETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 565
            E KK  + +K G A+M +GGVIMDV + EQA++AEEAGA AVMALERVPADIR +GGVARM+    I+EI ++V+IPVMAK RIGH  EA+ILE +G+D++DESEVLTPAD+  HINKH F++PFVCG R+LGEALRRI EGAAMIRTKGEAGTG
Sbjct:    2 EIKKGTWIIKKGFAEMFKGGVIMDVTSAEQAKIAEEAGAVAVMALERVPADIRKEGGVARMASIAKIREIMEAVSIPVMAKVRIGHIAEAKILEELGVDFIDESEVLTPADDRFHINKHEFKVPFVCGARDLGEALRRIAEGAAMIRTKGEAGTG 156          

HSP 2 Score: 27.7202 bits (60), Expect = 6.406e-59
Identity = 10/28 (35.71%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  562 GDIIETGKHVRAVMGDIRVLKKMDKDEV 645
            G+++E  KH+R +M  I+ + KM+ +E+
Sbjct:  156 GNVVEAVKHMRRMMEQIKQVTKMEDEEL 183          
The following BLAST results are available for this feature:
BLAST of EY675276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
PDXS_THEMA2.890e-5969.68Pyridoxal biosynthesis lyase pdxS OS=Thermotoga ma... [more]
PDXS_BACLD3.768e-5972.79Pyridoxal biosynthesis lyase pdxS OS=Bacillus lich... [more]
PDXS_LISMO3.768e-5969.03Pyridoxal biosynthesis lyase pdxS OS=Listeria mono... [more]
PDXS_NATTJ3.898e-5972.55Pyridoxal biosynthesis lyase pdxS OS=Natranaerobiu... [more]
PDXS_LISMH4.913e-5969.03Pyridoxal biosynthesis lyase pdxS OS=Listeria mono... [more]
PDXS_LISMF4.913e-5969.03Pyridoxal biosynthesis lyase pdxS OS=Listeria mono... [more]
PDXS_LISMC4.913e-5969.03Pyridoxal biosynthesis lyase pdxS OS=Listeria mono... [more]
PDXS_BACSU6.405e-5971.43Pyridoxal biosynthesis lyase pdxS OS=Bacillus subt... [more]
PDXS_ANOFW6.405e-5972.79Pyridoxal biosynthesis lyase pdxS OS=Anoxybacillus... [more]
PDXS_THEP16.406e-5969.68Pyridoxal biosynthesis lyase pdxS OS=Thermotoga pe... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-E05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675276 ID=EY675276; Name=EY675276; organism=Citrus sinensis; type=EST; length=1004bp
AAATTACATCTCTTCCCTCAAACACTTTTTCCTTCTCGCTATCGGCGTAA
TGGCAGGTACCGGAGTGGTGGCAGTCTACGGTAATGACGGCACTATAACG
GAGACTAAAAAATCTCCATTCTCCGTTAAAGTCGGTCTAGCTCAGATGCT
TCGGGGTGGCGTTATAATGGACGTAGTTACTCCCGAGCAAGCACGAGTCG
CGGAAGAGGCTGGTGCGTGCGCCGTCATGGCTCTTGAGCGCGTCCCCGCC
GATATCCGCTCGCAAGGCGGCGTGGCTCGCATGTCTGACCCGCAACTTAT
CAAGGAAATCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTA
TTGGCCACTTTGTCGAAGCTCAAATTCTCGAAGCTATTGGGATCGATTAC
GTCGACGAGAGCGAAGTCTTGACTCCCGCCGACGAAGAGAATCACATCAA
CAAGCACAACTTTCGTATCCCCTTCGTATGCGGCTGCCGGAACTTGGGGG
AAGCTTTGAGGAGGATTCGCGAAGGCGCGGCGATGATAAGAACGAAAGGC
GAGGCCGGAACGGGGATATCATCGAAACGGGGAAGCACGTGCGGGCTGTG
ATGGGGGATATTAGGGTTCTGAAGAAAATGGACAAAGACGAAGTGTTCCC
TTTTCCAAAAAAAATACCGGCCCCCTAAAAATTTGGTGATGCAAAAAAAC
CAACTGGGGGGGGTTTGCCGGGGGGGCCCTTTTCCCAGCGGGGAGAATGG
GGGAACCCCCGGGGGAATGGCGGGAAATAATAATGCAAAATTGGGAAGCG
CACCGGAATGGTTTGTCGGGGGCCGGGGGGGGTTTTTAAAAAAGGGGGGG
GAACCCCCGGGGGAAAAGGGGGGCCCCAAGACAAATTTTTTACAGGGGGG
GGGGGGGAAACCCTTTATTAAAAGTGGAGACCCCCCCGGGGGGGGGGTTT
GGGGGGGGGAGAAGGAGGGAAGAACGCTGGCGGGGGGGGGTGGTGGGGGG
GGGG
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