EY675260

Overview
NameEY675260
Unique NameEY675260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length990
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 5.401e-21
Identity = 71/215 (33.02%), Postives = 103/215 (47.91%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLL 633
            H    ST+SEY V+    V ++DPS  L     L CG +TGYGAA   AKVE                     ++ GA++IIGID N  K  K + FG T+ INP D  +KSI E++  +T G GVD+ FEC G   ++  ALE                     +  P  ++     GRT KGT FGG K+ + +    ++   ++K+K+ + +
Sbjct:  139 HFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATECINPQDF-SKSIQEVLIEMTDG-GVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVT----GRTWKGTAFGGWKS-VESVPKLVSEYMSKKIKVDEFV 346          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.203e-20
Identity = 64/193 (33.16%), Postives = 89/193 (46.11%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+    V ++DP+  L     L CG  TG GA W  AKVE                     +  GA++IIGID +  K E  + FG+ +F+NP D  +K I E++  +T G GVDY FEC G  S++  ALE                     +  P  ++     GR  KGT FGG K++
Sbjct:  142 HFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDH-DKPIQEVIVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT----GRVWKGTAFGGFKSR 328          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 1.571e-20
Identity = 70/215 (32.56%), Postives = 103/215 (47.91%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLL 633
            H    ST+SEY V+    V ++DPS  L     L CG +TGYGAA   AKVE                     ++ GA++IIGID N  K  K + FG ++ I+P D  +KSI E++  +T G GVDY FEC G   ++  ALE                     +  P  ++     GRT KGT FGG K+ + +    ++   ++K+K+ + +
Sbjct:  139 HFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGASECISPQDF-SKSIQEVLVEMTDG-GVDYSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVT----GRTWKGTAFGGWKS-VESVPKLVSEYMSKKIKVDEFV 346          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.572e-20
Identity = 64/187 (34.22%), Postives = 84/187 (44.92%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIK 561
            H    ST+SEY VI    V ++DP   L     LSCG +TG GA     K +K                    RM GA++IIG+D NP K E+ + FG TDF+NP D   K + E++  +T G GV+   ECTG    +  A E                    P+N +      RTL+GT FG  K
Sbjct:  142 HFLGTSTFSEYTVIHVGCVAKIDPEAPLDKVCLLSCGISTGLGATLNVTKPKKGMTVAIFGLGAVGLAAMEGARMSGASRIIGVDLNPAKHEQAKKFGCTDFVNPKDH-TKPVQEVIVEMTDG-GVNRAVECTGNADAMISAFECVHDGWGVAHKEAVFKTH--PMNFL----NERTLRGTFFGNYK 320          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.971e-20
Identity = 68/215 (31.63%), Postives = 100/215 (46.51%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLL 633
            H    ST+SEY V+    + +V+    +     L CG +TGYGAA   AKVE                     ++ GA +IIGID NP K E  + FG T+F+NP D  +K I E++  +T G GVDY FEC G   ++  ALE                     +  P  ++     GR  KGT FGG K+ + +    + +  ++KLK+ + +
Sbjct:  141 HFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAVIMGCKVAGATRIIGIDLNPAKFETAKEFGATEFVNPKDH-SKPIQEVLVEMTDG-GVDYSFECIGNVQIMRAALEACHKGWGESVIIGVAGAGQEISTRPFQLVT----GRVWKGTAFGGWKS-VESVPKLVEDYMSKKLKVDEFV 348          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.798e-20
Identity = 62/193 (32.12%), Postives = 90/193 (46.63%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+    V +++P   L     L CG +TG GA W  AKVE                     +  GA++IIGID +  K +  + FG+T+F+NP D  +K I +++  +T G GVDY FEC G  S++  ALE                     +  P  ++     GR  KGT FGG K++
Sbjct:  144 HFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDH-DKPIQQVIVDLTDG-GVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVT----GRVWKGTAFGGFKSR 330          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.798e-20
Identity = 62/193 (32.12%), Postives = 90/193 (46.63%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+    V +++P   L     L CG +TG GA W  AKVE                     +  GA++IIGID +  K +  + FG+T+F+NP D  +K I +++  +T G GVDY FEC G  S++  ALE                     +  P  ++     GR  KGT FGG K++
Sbjct:  144 HFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDH-DKPIQQVIVDLTDG-GVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVT----GRVWKGTAFGGFKSR 330          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.798e-20
Identity = 70/218 (32.11%), Postives = 101/218 (46.33%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLLDPS 642
            H    ST+SEY V+    V ++DP   L     L CG +TGYGAA   AKVE                     +M GAA+IIG+D N  K  + + FG ++ INP D  +K I E++  +T G GVDY FEC G   ++  ALE                        P  ++     GRT KGT FGG K+ + +    ++   ++K+K+ + +  S
Sbjct:  139 HYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNAAKVEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASECINPQDF-SKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAASGEEIATRPFQLVT----GRTWKGTAFGGWKS-VESVPKLVSEYMSKKIKVDEFVTHS 349          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1A_UROHA (Alcohol dehydrogenase 1A OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 1.019e-19
Identity = 62/189 (32.80%), Postives = 89/189 (47.09%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H  S S+++EY V+  N V+++D +  L     + CGF+TGYGAA + AKVE                     +  GA++IIG+D N  K  K +  G T+ +NP D   K I+E++  +T G GVDY FE  G    ++ AL +                         L   GRT KG+ FGG K+K
Sbjct:  139 HFISTSSFTEYTVVHENSVVKIDAAAPLEKVCLIGCGFSTGYGAAVETAKVEPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGVDINKDKFPKAKEMGATECVNPLDY-KKPINEVLFDLTGGEGVDYSFEVIGRTDTMTAALASCHMDYGTSIIVGLPPSASEITFSPGLIFTGRTWKGSVFGGWKSK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.330e-19
Identity = 64/193 (33.16%), Postives = 93/193 (48.19%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H   CST+SE+ V+    + +V+P   L     L CG +TGYGAA   A VEK                    +  GAA+IIGID N  K E G+ FG+T+F+NP  +  KS+ +++  +T  +GVD+ FEC G   ++  ALE+                    +  P  ++     GR  KGT FGG K++
Sbjct:  141 HFMGCSTFSEFTVVAEISIAKVNPKAALDKVCLLGCGISTGYGAALNTAAVEKGSNCAVWGLGAVGLAVAMGCKAAGAARIIGIDINESKFEIGKKFGITEFVNP-KKFCKSVQKVLGEMT-DVGVDFTFECIGNVGVMRAALESCHKGWGTSVIVGVAAHGEEISTRPFQLVT----GRVWKGTAFGGFKSR 327          
The following BLAST results are available for this feature:
BLAST of EY675260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ADHX_RAT5.401e-2133.02Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_ARATH1.203e-2033.16Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_MOUSE1.571e-2032.56Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADH2_HORVU4.572e-2034.22Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]
ADHX_SPAAU5.971e-2031.63Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_ORYSJ7.798e-2032.12Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSI7.798e-2032.12Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_BOVIN7.798e-2032.11Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADH1A_UROHA1.019e-1932.80Alcohol dehydrogenase 1A OS=Uromastyx hardwickii P... [more]
ADHX_OCTVU1.330e-1933.16Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-C09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675260 ID=EY675260; Name=EY675260; organism=Citrus sinensis; type=EST; length=990bp
CACATTTTTTCATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAA
TTATGTCCTCAGAGTTGATCCAAGCATAGACCTTTCGCATGCTAGCTTCC
TTTCATGTGGATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAA
GTTGAAAAAGGATCTAGTGTTGCTGTTTTAGGCCTTGGTACTGTTGGATT
AGGGGCTGTTGATGGAGCCAGGATGCAAGGGGCAGCTAAGATAATTGGGA
TAGACAAGAACCCATGGAAAAAAGAAAAGGGGGAAGCTTTTGGAATGACA
GATTTCATAAACCCTGATGATGAACCAAACAAGTCAATTTCAGAATTGGT
CAAGGGGATAACTCATGGAATGGGTGTGGATTATTGCTTCGAGTGCACTG
GGGTTCCATCTTTACTTTCTGAAGCACTTGAAACCACAAAAGTGGGAAAA
GGAAAAGTGATAGTAATTGGGGTGGGAGTTGATACCATGGTGCCACTGAA
CGTAATCGCTCTTGCATGTGGTGGTCGGACTTTGAAAGGGACCACTTTTG
GTGGGATCAAAAACAAAATCCGAACTTCCCAATACTGCTTGACAAATGCA
AGAACAAGGAAATTAAAACTCCATCAACTCCTTGACCCATCATGTTAAAT
TTGAAAGAAATCGAAAAGGGAATTTCAGCTGGTTGAACAAACCGGGATTG
GGGCAAGGGCCCCGAATCCCAATTTGATTTGGTTTTTATCCTAAGGCCCC
CCCTTGGGGTTAAAATTTCCGGGATCAAAAACCCTAAAAAAAAATCGGCC
CTCTTGAAAAATCCCCCTTCCTTATTTTTGTGTTTTCCCCCCCCCCAAAA
TTCCCCCCCCCCCCCCAAAACACCCTCTAAAAATTTTGTTAAAAAAAAAA
AAAAAAAAAAAAAAAAAGGAAAAATTTTTTTTTTTGGGCAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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