EY675260

Overview
NameEY675260
Unique NameEY675260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length990
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_GEOBU (Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH1 PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.988e-15
Identity = 59/193 (30.57%), Postives = 89/193 (46.11%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL----ETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    +T+SEY V+    V ++D +  L     + CGF+TGYG+A K  KV +                    +  GAA+II +D N  K  K +  G T+ +NP D  +K I ++++ +T G GVD+ FE  G    +  AL    E+                TM P+ +++    GR+ KG  FGG K K
Sbjct:  140 HFLGVTTFSEYTVVSEISVTKIDATSPLEKVCLIGCGFSTGYGSAVKVGKVARGSICSCVWSGRVGLSAIIGCKAAGAARIIAVDINKDKFAKAKELGATECVNPQDY-DKPIYQVLQEMTDG-GVDFSFEVIGRLDTMVSALMCCQESHGVSVIVGVPPNAQSLTMDPMVLLS----GRSWKGAVFGGYKGK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.596e-15
Identity = 61/191 (31.94%), Postives = 76/191 (39.79%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDD---EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKN 564
            H   CST+SEY V+    + +V+P   L   S L CG +TGYGA     KVE+                    +  GA KI+GID    K E  + FG T+ INP        KS    +     G G DY FEC G    + +ALE                              GRT KGT FGG K+
Sbjct:  142 HFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDG-GFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWKGTAFGGWKS 331          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.596e-15
Identity = 58/191 (30.37%), Postives = 82/191 (42.93%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIK 561
            H    ST+SEY V+ A  V +++P   L     LSCG  TG GA    AK +                     RM GA++IIG+D    + E  + FG+ +F+NP D  +K + +++  +T G GVD   ECTG    +  A E                        P+N +      RTLKGT +G  K
Sbjct:  143 HFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARMSGASRIIGVDLVSSRFELAKKFGVNEFVNPKDH-DKPVQQVIAEMTDG-GVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPKKDDAFKTHPMNFL----NERTLKGTFYGNYK 327          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 3.391e-15
Identity = 60/190 (31.58%), Postives = 90/190 (47.37%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT-XXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            ++   ST++EY V+    V ++DP   L  +  + CGF TGYGAA   AKV                      +  GA++IIG+  +  K  K    G T+ +NP D  +K I E++   T+G GVDY  EC G    +  AL++T               +  +PL+ + L   GR+LKG+ FGG K +
Sbjct:  140 NLVGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDY-DKPIYEVICEKTNG-GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLT-GRSLKGSVFGGFKGE 325          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.553e-15
Identity = 57/189 (30.16%), Postives = 85/189 (44.97%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            +  S ST++EY V+D   V ++     L     + CGF+TGYG+A    KV+                     ++ GA++IIG+D N  K    +  G T+ INP D  N  I E++  +T   GVDY FE  G  ++++ AL ++               + V      L   GR L G  FGG K+K
Sbjct:  140 NFISTSTFTEYTVLDEIAVAKIHEDAPLEKVCLIGCGFSTGYGSAVNTGKVKPGSTCAVFGLGGVGLSVIIGCKVAGASRIIGVDLNSDKFTTAKECGATECINPKDY-NIPIHEVLAKMTDD-GVDYAFEVIGNTTVMTSALSSSHFGCGKTVIVGLAPSSAVMSFDPLLILTGRILTGAVFGGWKSK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.865e-15
Identity = 57/191 (29.84%), Postives = 83/191 (43.46%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIK 561
            H    ST+SEY V+ A  V +++P   L     LSCG  TG GA    AK +                     R+ GA++IIG+D    + E  + FG+ +F+NP  E +K + +++  +T+G GVD   ECTG    +  A E                        P+N +      RTLKGT +G  K
Sbjct:  143 HFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATINVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNP-KEHDKPVQQVIAEMTNG-GVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFL----NERTLKGTFYGNYK 327          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH6_PERMA (Alcohol dehydrogenase 6 OS=Peromyscus maniculatus GN=ADH6 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.288e-14
Identity = 60/184 (32.61%), Postives = 84/184 (45.65%), Query Frame = 1
Query:   19 TWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIA-LACGGRTLKGTTFGGIKNK 567
            T+SEY+VI    V +VD    L  A  + CGF TG+GAA   AKV                      +  GAA+II +D N  K  K +  G T+ I+P D   K I +++  + +  G D+ FE TG P  +  AL  +               + + LN+ + L   GRTLKG+  GG K K
Sbjct:  146 TFSEYIVIKEISVAKVDEDALLEKACIIGCGFATGFGAAINSAKVSPGSTCAVFGLGGVGLSVIMGCKAAGAARIIAVDTNKDKFAKAKTVGATECIDPQDF-EKPIQQVLFDMMND-GADFTFEVTGNPETVETAL-ASCHKDHGVCVIVGSLASWIQLNINSHLFFSGRTLKGSVLGGWKTK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.683e-14
Identity = 60/202 (29.70%), Postives = 86/202 (42.57%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLK-------------GTTFGGIKNK 567
            H   CS++S+Y V+    ++ +  S  L     L CG TTG+GA    AKVE                        GA++II ID N  K+   + FG TDFI  D    K + + V  +T G GVDY F+CTG  +++ + L+                     L VI +A  G+TL              G+ FGG+K +
Sbjct:  141 HYMGCSSFSQYTVVADISLVAISHSAPLRSICLLGCGVTTGFGAVTHSAKVESGSTVAVVGCGCVGLAAMQGAVAAGASRIIAIDINADKEVYAKKFGATDFI--DSSKVKDLVQYVIDVTDG-GVDYAFDCTGNVTVMQQELQFCHKGWG-------------KLCVIGVAAAGKTLDFRPFLVVTGRQVLGSAFGGVKGR 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.683e-14
Identity = 56/189 (29.63%), Postives = 81/189 (42.86%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    +T+SEY V+    V ++D +  L     + CGF+TGYG+A K  KV +                    +  GAA+II +D N  K  K +  G T+ +NP D  +K I E+++ +T G GVD+ FE  G       AL                 +         +   GR+ KG  FGG K K
Sbjct:  140 HFLGVTTFSEYTVVSEISVTKIDAASPLEKVCLIGCGFSTGYGSAVKVGKVARGSICACVWSGRVGLSAIIGCKAAGAARIIAVDINKDKFAKAKELGATECVNPQDY-DKPIYEVLQEMTDG-GVDFSFEVIGRLDTKVSALMCCQESHGVSVIVGVPPNAQSLTIDPKVLLSGRSWKGAVFGGYKGK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH6_RAT (Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Adh6 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.870e-14
Identity = 57/184 (30.98%), Postives = 80/184 (43.48%), Query Frame = 1
Query:   19 TWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIA-LACGGRTLKGTTFGGIKNK 567
            ++SEY V+    V ++D    L     + CGF TGYGAA   AKV                      +  GAA+II +D N  +  K +  G TD ++P D   K I E++  +  G GVD+CFE TG    +  AL +                    L++ + L   GR LKG+  GG K K
Sbjct:  146 SFSEYTVLKEISVAKIDEGAPLEKVCIIGCGFATGYGAAINSAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDRFAKAKTVGATDCVDPRDF-EKPIEEVLSDMIDG-GVDFCFEVTGNTEAVGAALGSCHKDHGVCVTVGALASFTSTLSIRSHLFFSGRILKGSILGGWKTK 327          
The following BLAST results are available for this feature:
BLAST of EY675260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ADH1_GEOBU1.988e-1530.57Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH... [more]
ADHX_CAEEL2.596e-1531.94Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADH1_TRIRP2.596e-1530.37Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH8_RANPE3.391e-1531.58NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]
ADH1_RANPE7.553e-1530.16Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
ADH1_PEA9.865e-1529.84Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH6_PERMA1.288e-1432.61Alcohol dehydrogenase 6 OS=Peromyscus maniculatus ... [more]
FADH1_SCHPO1.683e-1429.70Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH1_GEOAT1.683e-1429.63Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]
ADH6_RAT2.870e-1430.98Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Ad... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-C09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675260 ID=EY675260; Name=EY675260; organism=Citrus sinensis; type=EST; length=990bp
CACATTTTTTCATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAA
TTATGTCCTCAGAGTTGATCCAAGCATAGACCTTTCGCATGCTAGCTTCC
TTTCATGTGGATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAA
GTTGAAAAAGGATCTAGTGTTGCTGTTTTAGGCCTTGGTACTGTTGGATT
AGGGGCTGTTGATGGAGCCAGGATGCAAGGGGCAGCTAAGATAATTGGGA
TAGACAAGAACCCATGGAAAAAAGAAAAGGGGGAAGCTTTTGGAATGACA
GATTTCATAAACCCTGATGATGAACCAAACAAGTCAATTTCAGAATTGGT
CAAGGGGATAACTCATGGAATGGGTGTGGATTATTGCTTCGAGTGCACTG
GGGTTCCATCTTTACTTTCTGAAGCACTTGAAACCACAAAAGTGGGAAAA
GGAAAAGTGATAGTAATTGGGGTGGGAGTTGATACCATGGTGCCACTGAA
CGTAATCGCTCTTGCATGTGGTGGTCGGACTTTGAAAGGGACCACTTTTG
GTGGGATCAAAAACAAAATCCGAACTTCCCAATACTGCTTGACAAATGCA
AGAACAAGGAAATTAAAACTCCATCAACTCCTTGACCCATCATGTTAAAT
TTGAAAGAAATCGAAAAGGGAATTTCAGCTGGTTGAACAAACCGGGATTG
GGGCAAGGGCCCCGAATCCCAATTTGATTTGGTTTTTATCCTAAGGCCCC
CCCTTGGGGTTAAAATTTCCGGGATCAAAAACCCTAAAAAAAAATCGGCC
CTCTTGAAAAATCCCCCTTCCTTATTTTTGTGTTTTCCCCCCCCCCAAAA
TTCCCCCCCCCCCCCCAAAACACCCTCTAAAAATTTTGTTAAAAAAAAAA
AAAAAAAAAAAAAAAAAGGAAAAATTTTTTTTTTTGGGCAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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