EY675260

Overview
NameEY675260
Unique NameEY675260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length990
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.737e-19
Identity = 63/191 (32.98%), Postives = 90/191 (47.12%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIK 561
            H    ST+SEY VI    + +++P   L     LSCGF+TG+GA    AK +K                    R+ GA++IIG+D NP K E+ + FG TDF+NP D  +K + E++  +T+G G+D   ECTG  + +    E                   V    P+N +      +TLKGT FG  K
Sbjct:  142 HFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFSTGFGATVNVAKPKKGQTVAIFGLGAVGLAAMEGARLSGASRIIGVDLNPAKFEQAKKFGCTDFVNPKDH-SKPVHEVLIEMTNG-GLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFL----NEKTLKGTFFGNYK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.737e-19
Identity = 63/191 (32.98%), Postives = 90/191 (47.12%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIK 561
            H    ST+SEY VI    + +++P   L     LSCGF+TG+GA    AK +K                    R+ GA++IIG+D NP K E+ + FG TDF+NP D  +K + E++  +T+G G+D   ECTG  + +    E                   V    P+N +      +TLKGT FG  K
Sbjct:  142 HFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFSTGFGATVNVAKPKKGQTVAIFGLGAVGLAAMEGARLSGASRIIGVDLNPAKFEQAKKFGCTDFVNPKDH-SKPVHEVLIEMTNG-GLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFL----NEKTLKGTFFGNYK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.269e-19
Identity = 63/193 (32.64%), Postives = 87/193 (45.08%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+    V ++ P   L     L CG  TG GA W  AKVE                     +  GA++IIGID +  K +  + FG+T+FINP D   K I +++  +T G GVDY FEC G  S++  ALE                     +  P  ++     GR  KGT FGG K++
Sbjct:  141 HFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVTEFINPKDH-EKPIQQVIIDLTDG-GVDYSFECLGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVT----GRVWKGTAFGGFKSR 327          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.269e-19
Identity = 64/212 (30.19%), Postives = 100/212 (47.17%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE-TTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLL 633
            H    ST+SEY V+  + + ++D +  L     + CGF+TGYGAA   A+VE                     +  GA+KI GID N  K    +  G TD +NP D   K + E++  +T+G GVD+  EC G P ++  A E TT              +  +P + + L   GR +K T FGG K+ +++    +++   +K  L  L+
Sbjct:  144 HFMGTSTFSEYTVVSESSLAKIDAAAPLDKVCLIGCGFSTGYGAAINTAQVEPGSTCAVFGLGGVGLSAVMGCKAAGASKIFGIDINKDKFPLAKKLGATDCLNPQD-IRKPVQEIIAEMTNG-GVDFAIECIGNPDVMKAAFESTTVGWGTCVIVGVAVGEQSIPFSPMQLIM-GRKIKATFFGGWKS-VKSVPKLVSDYMAKKFDLDALV 351          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.269e-19
Identity = 62/193 (32.12%), Postives = 87/193 (45.08%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+SEY V  +  V ++DP   L     LSCG +TG GA    AK  K                    R+ GA++IIG+D NP +    + FG+T+F+NP D  +K + +++  +T G GVD   ECTG  + +  A E                        P+N++      RTLKGT FG  K K
Sbjct:  144 HFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGISTGLGATLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFNDAKKFGVTEFVNPKDHGDKPVQQVIAEMTDG-GVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLL----NERTLKGTFFGNYKPK 331          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH4_HUMAN (Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE=1 SV=4)

HSP 1 Score: 96.2857 bits (238), Expect = 2.963e-19
Identity = 68/215 (31.63%), Postives = 100/215 (46.51%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLL 633
            H F  ST+S+Y V+    + ++D   +L     L CGF+TGYGAA   AKV                      +  GA++IIGID N  K  K +A G TD +NP D  +K I E++  +T G GVD+  +C G    +  AL+ T                   T+ P  +I     GRT+ GT FGG K+ + +    +T+ + +K  L  L+
Sbjct:  145 HFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCLNPRD-LHKPIQEVIIELTKG-GVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAAGSKGLTVFPEELII----GRTINGTFFGGWKS-VDSIPKLVTDYKNKKFNLDALV 352          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.870e-19
Identity = 61/193 (31.61%), Postives = 90/193 (46.63%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+    V +++P   L     L CG  TG GA W  AKVE                     +  GA+++IGID +  K +  + FG+T+F+NP  E +K I +++  +T G GVDY FEC G  S++  ALE +                   +  P  ++     GR  KGT FGG K++
Sbjct:  144 HFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTEFVNP-KEHDKPIQQVLVDLTDG-GVDYSFECIGNVSIMRAALECSDKGWGTSVIVGVAASGQEISTRPFQLVT----GRVWKGTAFGGFKSR 330          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.870e-19
Identity = 69/218 (31.65%), Postives = 101/218 (46.33%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLLDPS 642
            H    ST+SEY V+    V ++DP   L     L CG +TGYGAA   AKVE                     ++ GA++IIG+D N  K  K + FG ++ INP D  +K I E++  +T G GVDY FEC G   ++  ALE                        P  ++     GRT KGT FGG K+ + +    ++   ++K+K+ + +  S
Sbjct:  139 HYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGSTCAIFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFAKAKEFGASECINPQDF-SKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVT----GRTWKGTAFGGWKS-VESIPKLVSEYMSKKIKVDEFVTHS 349          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.870e-19
Identity = 64/191 (33.51%), Postives = 86/191 (45.03%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIK 561
            H    ST+SEY VI    + +++P   L     LSCG +TG GA    AK +K                    RM GA++IIG+D NP K E+ + FG TDF+NP D   K + E++  +T+G GVD   ECTG    +    E                   V    P+N +      +TLKGT FG  K
Sbjct:  142 HFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCVLSCGLSTGLGATLNVAKPKKGSTVAIFGLGAVGLAAMEGARMAGASRIIGVDLNPAKYEQAKKFGCTDFVNPKDH-TKPVQEVLVEMTNG-GVDRAVECTGHIDAMIATFECVHDGWGVAVLVGVPHKEAVFKTHPMNFL----NEKTLKGTFFGNYK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.055e-19
Identity = 63/191 (32.98%), Postives = 89/191 (46.60%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIK 561
            H    ST+SEY V+    V +++P   L     LSCG +TG GA+   AK  K                    R+ GA++IIG+D NP + E+ + FG T+F+NP D  NK + E++  +T+G GVD   ECTG  + + +A E                        P+N +      RTLKGT FG  K
Sbjct:  142 HFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEAKKFGCTEFVNPKDH-NKPVQEVLADMTNG-GVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFL----NERTLKGTFFGNFK 326          
The following BLAST results are available for this feature:
BLAST of EY675260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ADH2_ORYSJ1.737e-1932.98Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI1.737e-1932.98Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADHX_PEA2.269e-1932.64Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADH4_STRCA2.269e-1930.19Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
ADH1_PETHY2.269e-1932.12Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH4_HUMAN2.963e-1931.63Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE... [more]
ADHX_MAIZE3.870e-1931.61Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_HORSE3.870e-1931.65Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADH3_HORVU3.870e-1933.51Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADH1_PENAM5.055e-1932.98Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-C09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675260 ID=EY675260; Name=EY675260; organism=Citrus sinensis; type=EST; length=990bp
CACATTTTTTCATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAA
TTATGTCCTCAGAGTTGATCCAAGCATAGACCTTTCGCATGCTAGCTTCC
TTTCATGTGGATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAA
GTTGAAAAAGGATCTAGTGTTGCTGTTTTAGGCCTTGGTACTGTTGGATT
AGGGGCTGTTGATGGAGCCAGGATGCAAGGGGCAGCTAAGATAATTGGGA
TAGACAAGAACCCATGGAAAAAAGAAAAGGGGGAAGCTTTTGGAATGACA
GATTTCATAAACCCTGATGATGAACCAAACAAGTCAATTTCAGAATTGGT
CAAGGGGATAACTCATGGAATGGGTGTGGATTATTGCTTCGAGTGCACTG
GGGTTCCATCTTTACTTTCTGAAGCACTTGAAACCACAAAAGTGGGAAAA
GGAAAAGTGATAGTAATTGGGGTGGGAGTTGATACCATGGTGCCACTGAA
CGTAATCGCTCTTGCATGTGGTGGTCGGACTTTGAAAGGGACCACTTTTG
GTGGGATCAAAAACAAAATCCGAACTTCCCAATACTGCTTGACAAATGCA
AGAACAAGGAAATTAAAACTCCATCAACTCCTTGACCCATCATGTTAAAT
TTGAAAGAAATCGAAAAGGGAATTTCAGCTGGTTGAACAAACCGGGATTG
GGGCAAGGGCCCCGAATCCCAATTTGATTTGGTTTTTATCCTAAGGCCCC
CCCTTGGGGTTAAAATTTCCGGGATCAAAAACCCTAAAAAAAAATCGGCC
CTCTTGAAAAATCCCCCTTCCTTATTTTTGTGTTTTCCCCCCCCCCAAAA
TTCCCCCCCCCCCCCCAAAACACCCTCTAAAAATTTTGTTAAAAAAAAAA
AAAAAAAAAAAAAAAAAGGAAAAATTTTTTTTTTTGGGCAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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