EY675260

Overview
NameEY675260
Unique NameEY675260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length990
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.055e-19
Identity = 63/191 (32.98%), Postives = 89/191 (46.60%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIK 561
            H    ST+SEY V+    V +++P   L     LSCG++TG GA+   AK  K                    R+ GA++IIG+D NP + E+   FG T+F+NP D  NK + E++  +T+G GVD   ECTG  + + +A E                        P+N +      RTLKGT FG  K
Sbjct:  142 HFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGYSTGLGASINVAKPPKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVNPKDH-NKPVQEVLAEMTNG-GVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFL----NERTLKGTFFGNYK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 95.1301 bits (235), Expect = 6.602e-19
Identity = 67/215 (31.16%), Postives = 100/215 (46.51%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLL 633
            H    ST+SEY V+    V ++DP   L     L CG +TGYGAA   AK+E                     ++ GA++IIG+D N  K  + + FG T+ INP D  +K I E++  +T G GVDY FEC G   ++  ALE                        P  ++     GRT KGT FGG K+ + +    ++   ++K+K+ + +
Sbjct:  139 HYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVT----GRTWKGTAFGGWKS-VESVPKLVSEYMSKKIKVDEFV 346          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.126e-18
Identity = 63/191 (32.98%), Postives = 88/191 (46.07%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIK 561
            H    ST+SEY V+    V +++P   L     LSCG +TG GA+   AK  K                    R+ GA++IIG+D NP + E+   FG T+F+NP D  NK + E++  +T+G GVD   ECTG  + + +A E                        P+N +      RTLKGT FG  K
Sbjct:   69 HFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVNPKDH-NKPVQEVLAEMTNG-GVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFL----NERTLKGTFFGNYK 253          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_MYXGL (Alcohol dehydrogenase class-3 OS=Myxine glutinosa PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.471e-18
Identity = 65/192 (33.85%), Postives = 87/192 (45.31%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKN 564
            H    ST+SEY V+    + RV P         L CG +TGYGA    AKVE                     R+ GA++II ID+NP K EK   FG TD + P D  +K IS+++  +T G G+DY FEC G   ++  ALE+                    +  P  ++     GRT KG  FGG K+
Sbjct:  141 HFMGASTFSEYAVVADISLCRVAPEAPPDRVCLLGCGVSTGYGAPLNTAKVEPGSTCAIFGLGAVGLAAIMGCRVAGASRIIAIDRNPDKFEKARIFGATDCVVP-DASDKPISQVLGEMTDG-GLDYTFECVGNVGIMRAALESCHKGWGVSVILGVAGGGQEISTRPFQLVT----GRTWKGAAFGGWKS 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH4_RAT (Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Adh4 PE=2 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 1.471e-18
Identity = 64/211 (30.33%), Postives = 99/211 (46.92%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLL 633
            H    S++S+Y V+    + RVD   +L     + CGFT+GYGAA   AKV                      ++ GA++II ID N  K  K +A G TD +NP D  +K + +++  +T G GVD+  +C G    L  A++ T              D M    V  +   GR++KGT FGG K+ + +    +T+ + +K  L  L+
Sbjct:  144 HFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFTSGYGAAINTAKVTPGSACAVFGLGCVGLSAVIGCKIAGASRIIAIDINSEKFPKAKALGATDCLNPRD-LDKPVQDVITELTGG-GVDFSLDCAGTAQTLKAAVDCTVVGWGSCTVVGAKVDEMNISTVDMIL--GRSVKGTFFGGWKS-VDSVPNLVTDYKNKKFDLDLLV 349          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.921e-18
Identity = 65/211 (30.81%), Postives = 91/211 (43.13%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLL 633
            H    ST+SEY V+    +  VDP   L     L CG +TGYGAA   AKVE                     ++ GA +IIG+D NP K  K   FG T+ +NP D   + + E++  +T G GVDY FEC G   ++  ALE                              GR  K T FGG K+ + +    + +   +KLK+ + +
Sbjct:  140 HFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAAIMGCKVAGATRIIGVDINPEKFGKAAEFGATECLNPKDHA-RPVQEVLVEMTDG-GVDYSFECIGNVEIMRSALEACHKGWGESVIIGVAGAGQEIATRPFQLVTGRVWKATAFGGWKS-VESVPKLVEDYMNKKLKVDEFV 347          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1G_PAPHA (Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH1C PE=2 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.921e-18
Identity = 64/190 (33.68%), Postives = 88/190 (46.32%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTM-VPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+D N V ++D +  L     + CGF+TGYG A K AKV                      +  GAA+II +D N  K  K +  G T+ INP D   K I E++K +T G GVD+ FE  G    +  +L                 D+  + +N + L   GRT KG  FGG K+K
Sbjct:  140 HFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGPAVKVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTIMASLLCCHEACGTSVIVGVPPDSQNLSINPVLLLT-GRTWKGAIFGGFKSK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 2.509e-18
Identity = 66/192 (34.38%), Postives = 87/192 (45.31%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKN 564
            H    ST+SEY V+    V ++DPS  L     L CG +TGYGAA   AKVE                     +  GA++II +D N  K  + + FG T+ INP D  +K I E++   T G GVDY FEC G   ++  ALE                     +  P  ++     GRT KGT FGG K+
Sbjct:  139 HYMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGGVGLAAIMGCKAAGASRIIAVDINKDKFARAKEFGATECINPQDF-SKPIQEVLVEKTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAGAGEEISTRPFQLVT----GRTWKGTAFGGWKS 324          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1G_HUMAN (Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.509e-18
Identity = 64/190 (33.68%), Postives = 89/190 (46.84%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTM-VPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+D N V ++D +  L     + CGF+TGYG+A K AKV                      +  GAA+II +D N  K  K +  G T+ INP D   K I E++K +T G GVD+ FE  G    +  +L                 D+  + +N + L   GRT KG  FGG K+K
Sbjct:  140 HFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLT-GRTWKGAIFGGFKSK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH2_MAIZE (Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.276e-18
Identity = 62/191 (32.46%), Postives = 88/191 (46.07%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIK 561
            H    ST+SEY VI    + +++P   L     LSCG +TG GA    AK  K                    R+ GA++IIG+D NP K E+ + FG T+F+NP D  +K + E++  +T+G GVD   ECTG  + +  A E                        P+N ++     +TLKGT FG  K
Sbjct:  142 HFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGISTGLGATLNVAKPAKGSTVAIFGLGAVGLAAMEGARLAGASRIIGVDINPAKYEQAKKFGCTEFVNPKDH-DKPVQEVLIELTNG-GVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPHKDDQFKTHPMNFLS----EKTLKGTFFGNYK 326          
The following BLAST results are available for this feature:
BLAST of EY675260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ADH1_MAIZE5.055e-1932.98Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]
ADHX_HUMAN6.602e-1931.16Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADH1_ZEALU1.126e-1832.98Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]
ADHX_MYXGL1.471e-1833.85Alcohol dehydrogenase class-3 OS=Myxine glutinosa ... [more]
ADH4_RAT1.471e-1830.33Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Ad... [more]
ADHH_GADMO1.921e-1830.81Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADH1G_PAPHA1.921e-1833.68Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH... [more]
ADHX_RABIT2.509e-1834.38Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
ADH1G_HUMAN2.509e-1833.68Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C ... [more]
ADH2_MAIZE3.276e-1832.46Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-C09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675260 ID=EY675260; Name=EY675260; organism=Citrus sinensis; type=EST; length=990bp
CACATTTTTTCATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAA
TTATGTCCTCAGAGTTGATCCAAGCATAGACCTTTCGCATGCTAGCTTCC
TTTCATGTGGATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAA
GTTGAAAAAGGATCTAGTGTTGCTGTTTTAGGCCTTGGTACTGTTGGATT
AGGGGCTGTTGATGGAGCCAGGATGCAAGGGGCAGCTAAGATAATTGGGA
TAGACAAGAACCCATGGAAAAAAGAAAAGGGGGAAGCTTTTGGAATGACA
GATTTCATAAACCCTGATGATGAACCAAACAAGTCAATTTCAGAATTGGT
CAAGGGGATAACTCATGGAATGGGTGTGGATTATTGCTTCGAGTGCACTG
GGGTTCCATCTTTACTTTCTGAAGCACTTGAAACCACAAAAGTGGGAAAA
GGAAAAGTGATAGTAATTGGGGTGGGAGTTGATACCATGGTGCCACTGAA
CGTAATCGCTCTTGCATGTGGTGGTCGGACTTTGAAAGGGACCACTTTTG
GTGGGATCAAAAACAAAATCCGAACTTCCCAATACTGCTTGACAAATGCA
AGAACAAGGAAATTAAAACTCCATCAACTCCTTGACCCATCATGTTAAAT
TTGAAAGAAATCGAAAAGGGAATTTCAGCTGGTTGAACAAACCGGGATTG
GGGCAAGGGCCCCGAATCCCAATTTGATTTGGTTTTTATCCTAAGGCCCC
CCCTTGGGGTTAAAATTTCCGGGATCAAAAACCCTAAAAAAAAATCGGCC
CTCTTGAAAAATCCCCCTTCCTTATTTTTGTGTTTTCCCCCCCCCCAAAA
TTCCCCCCCCCCCCCCAAAACACCCTCTAAAAATTTTGTTAAAAAAAAAA
AAAAAAAAAAAAAAAAAGGAAAAATTTTTTTTTTTGGGCAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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