EY675260

Overview
NameEY675260
Unique NameEY675260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length990
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_ALLMI (Alcohol dehydrogenase 1 OS=Alligator mississippiensis PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.279e-18
Identity = 66/190 (34.74%), Postives = 88/190 (46.32%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE-TTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST++EY V+    V R+D +  L     + CGF+TGYGAA K+AKVE                     +  GA++IIGID N  K  K +  G T+ INP D   K I E++  +T G GVDY FE  G    ++ AL                     +  N + L   GRT KG+ FGG K+K
Sbjct:  139 HFIGTSTFTEYTVVHETAVARIDAAAPLEKVCLIGCGFSTGYGAAVKDAKVEPGSTCAVFGLGGVGLSTIMGCKAAGASRIIGIDINKDKFAKAKELGATECINPLD-CKKPIQEVLSEMTGG-GVDYSFEVIGRIDTMTAALACCQDNYGTSVIVGVPPASEKITFNPMMLFT-GRTWKGSVFGGWKSK 325          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1A_PONAB (Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A PE=2 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 4.279e-18
Identity = 63/190 (33.16%), Postives = 89/190 (46.84%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTM-VPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+D N V ++D +  L+    + CGF+TGYG+A   AKV                      +  GAA+II +D N  K  K +  G T+ INP D  NK I E++K +T G GVD+ FE  G    +  +L                 D+  + +N + L   GRT KG   GG K+K
Sbjct:  140 HFLGISTFSQYTVVDENAVAKIDAASPLAKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-NKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLLLT-GRTWKGAVLGGFKSK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.589e-18
Identity = 66/211 (31.28%), Postives = 96/211 (45.50%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLL 633
            H  + ST++EY V+D + V ++D +        + CGF+TGYGAA K  KV+                     +  GA++IIGID N  K EK  A G T+ I+P D   K ISE++  +T G  V Y FE  G    + +AL +                  +      L   GRT KG  FGG+K++    +  +T    +K  L QL+
Sbjct:  139 HFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDS-TKPISEVLSEMT-GNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPK-LVTEFLAKKFDLDQLI 346          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 5.589e-18
Identity = 63/191 (32.98%), Postives = 87/191 (45.55%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIK 561
            H    ST+SEY V+    V +++P   L     LSCG +TG GA+   AK  K                    R+ GA++IIG+D N  + E+ + FG+T+F+NP D  +K + E++  +T G GVD   ECTG    +  A E                   V    PLN +      RTLKGT FG  K
Sbjct:  143 HFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGASLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDY-SKPVQEVIAEMTDG-GVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPLNFL----NERTLKGTFFGNYK 327          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_RAT (Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Adh1 PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 5.589e-18
Identity = 64/190 (33.68%), Postives = 90/190 (47.37%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG-VPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H  S ST+S+Y V+D   V ++D +  L     + CGF+TGYG+A + AKV                      +  GAAKII +D N  K  K +  G TD INP D   K I E+++ +T G GVD+ FE  G + ++ S  L                    + +N ++L   GRT KG  FGG K+K
Sbjct:  141 HFISTSTFSQYTVVDDIAVAKIDAAAPLDKVCLIGCGFSTGYGSAVQVAKVTPGSTCAVFGLGGVGLSVVIGCKTAGAAKIIAVDINKDKFAKAKELGATDCINPQDY-TKPIQEVLQEMTDG-GVDFSFEVIGRLDTMTSALLSCHSACGVSVIVGVPPSAQSLSVNPMSLLL-GRTWKGAIFGGFKSK 327          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1A_MACMU (Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1A PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 5.589e-18
Identity = 62/190 (32.63%), Postives = 89/190 (46.84%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTM-VPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+D N V ++D +  +     + CGF+TGYG+A K AKV                      +  GAA+II +D N  K  K +  G T+ INP D   K I E++K +T G GVD+ FE  G    +  +L                 D+  + +N + L   GRT KG  +GG K+K
Sbjct:  140 HFLGVSTFSQYTVVDENAVAKIDAASPMEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLT-GRTWKGAVYGGFKSK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 7.299e-18
Identity = 60/189 (31.75%), Postives = 89/189 (47.09%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTM-VPLNVIALACGGRTLKGTTFGGIKN 564
            H    S++S+Y V+    + RVD   +L     + CGF++GYGAA   AKV                      ++ GA++II ID N  K  K +A G TD +NP  E +K + +++  +T G GVDY  +C G    L  A++ T              D M +P   + L   GR++ GT FGG K+
Sbjct:  144 HFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNP-RELDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVIL---GRSINGTFFGGWKS 327          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.299e-18
Identity = 62/189 (32.80%), Postives = 86/189 (45.50%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST++EY V+    V ++D +  L     + CGF+TGYGAA + AKVE                     +  GA++IIG+D N  K  K +  G TD +NP D   K I E++  +T G+GVDY FE  G    ++ AL +                         L   GRT KG+ FGG K+K
Sbjct:  139 HFAGTSTFTEYTVLHETAVAKIDAAAPLEKVCLIGCGFSTGYGAALQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIGVDINKDKFAKAKELGATDCVNPKDF-TKPIHEVLMEMT-GLGVDYSFEVIGHTETMAAALASCHFNYGVSVIVGVPPAAEKLSFDPMLLFSGRTWKGSVFGGWKSK 325          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.299e-18
Identity = 62/191 (32.46%), Postives = 87/191 (45.55%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIK 561
            H    ST+SEY V+    V +++P   L     LSCG +TG GA    AK  K                    R+ GA++IIG+D N  + E+ + FG+T+F+NP D  +K + E++  +T G GVD   ECTG    +  A E                   V    P+N++      RTLKGT FG  K
Sbjct:  143 HFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDY-SKPVQEVIAEMTDG-GVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNLL----NERTLKGTFFGNYK 327          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 7.299e-18
Identity = 61/189 (32.28%), Postives = 86/189 (45.50%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+D   V ++D +  L     + CGF+TGYG+A K AKV +                    +  GAA+IIG+D N  K  K +  G T+ +NP D   K I E++  +++G GVD+ FE  G    +  AL                 D+        L   GRT KG  FGG K+K
Sbjct:  140 HFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSK 326          
The following BLAST results are available for this feature:
BLAST of EY675260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ADH1_ALLMI4.279e-1834.74Alcohol dehydrogenase 1 OS=Alligator mississippien... [more]
ADH1A_PONAB4.279e-1833.16Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A ... [more]
ADH7_HUMAN5.589e-1831.28Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]
ADH2_SOLLC5.589e-1832.98Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]
ADH1_RAT5.589e-1833.68Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Ad... [more]
ADH1A_MACMU5.589e-1832.63Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1... [more]
ADH4_MOUSE7.299e-1831.75Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADH1_STRCA7.299e-1832.80Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH1_SOLTU7.299e-1832.46Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH1E_HORSE7.299e-1832.28Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-C09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675260 ID=EY675260; Name=EY675260; organism=Citrus sinensis; type=EST; length=990bp
CACATTTTTTCATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAA
TTATGTCCTCAGAGTTGATCCAAGCATAGACCTTTCGCATGCTAGCTTCC
TTTCATGTGGATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAA
GTTGAAAAAGGATCTAGTGTTGCTGTTTTAGGCCTTGGTACTGTTGGATT
AGGGGCTGTTGATGGAGCCAGGATGCAAGGGGCAGCTAAGATAATTGGGA
TAGACAAGAACCCATGGAAAAAAGAAAAGGGGGAAGCTTTTGGAATGACA
GATTTCATAAACCCTGATGATGAACCAAACAAGTCAATTTCAGAATTGGT
CAAGGGGATAACTCATGGAATGGGTGTGGATTATTGCTTCGAGTGCACTG
GGGTTCCATCTTTACTTTCTGAAGCACTTGAAACCACAAAAGTGGGAAAA
GGAAAAGTGATAGTAATTGGGGTGGGAGTTGATACCATGGTGCCACTGAA
CGTAATCGCTCTTGCATGTGGTGGTCGGACTTTGAAAGGGACCACTTTTG
GTGGGATCAAAAACAAAATCCGAACTTCCCAATACTGCTTGACAAATGCA
AGAACAAGGAAATTAAAACTCCATCAACTCCTTGACCCATCATGTTAAAT
TTGAAAGAAATCGAAAAGGGAATTTCAGCTGGTTGAACAAACCGGGATTG
GGGCAAGGGCCCCGAATCCCAATTTGATTTGGTTTTTATCCTAAGGCCCC
CCCTTGGGGTTAAAATTTCCGGGATCAAAAACCCTAAAAAAAAATCGGCC
CTCTTGAAAAATCCCCCTTCCTTATTTTTGTGTTTTCCCCCCCCCCAAAA
TTCCCCCCCCCCCCCCAAAACACCCTCTAAAAATTTTGTTAAAAAAAAAA
AAAAAAAAAAAAAAAAAGGAAAAATTTTTTTTTTTGGGCAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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